Experiment: D-Glucose (C); 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS05645 and A4249_RS05650 overlap by 4 nucleotides A4249_RS05650 and A4249_RS05655 are separated by 110 nucleotides A4249_RS05655 and A4249_RS05660 are separated by 23 nucleotides A4249_RS05660 and A4249_RS05665 overlap by 4 nucleotides
A4249_RS05645: A4249_RS05645 - MFS transporter, at 1,155,949 to 1,157,346
_RS05645
A4249_RS05650: A4249_RS05650 - ribonuclease HI, at 1,157,343 to 1,157,795
_RS05650
A4249_RS05655: A4249_RS05655 - twin-arginine translocase TatA/TatE family subunit, at 1,157,906 to 1,158,124
_RS05655
A4249_RS05660: A4249_RS05660 - Sec-independent protein translocase protein TatB, at 1,158,148 to 1,158,726
_RS05660
A4249_RS05665: A4249_RS05665 - twin-arginine translocase subunit TatC, at 1,158,723 to 1,159,613
_RS05665
Position (kb)
1157
1158 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1156.348 kb on + strand, within A4249_RS05645 at 1156.354 kb on + strand, within A4249_RS05645 at 1156.354 kb on + strand, within A4249_RS05645 at 1156.354 kb on + strand, within A4249_RS05645 at 1156.354 kb on + strand, within A4249_RS05645 at 1156.354 kb on + strand, within A4249_RS05645 at 1156.355 kb on - strand, within A4249_RS05645 at 1156.355 kb on - strand, within A4249_RS05645 at 1156.355 kb on - strand, within A4249_RS05645 at 1156.443 kb on + strand, within A4249_RS05645 at 1156.444 kb on - strand, within A4249_RS05645 at 1156.444 kb on - strand, within A4249_RS05645 at 1156.453 kb on - strand, within A4249_RS05645 at 1156.485 kb on + strand, within A4249_RS05645 at 1156.485 kb on + strand, within A4249_RS05645 at 1156.485 kb on + strand, within A4249_RS05645 at 1156.485 kb on + strand, within A4249_RS05645 at 1156.485 kb on + strand, within A4249_RS05645 at 1156.485 kb on + strand, within A4249_RS05645 at 1156.486 kb on - strand, within A4249_RS05645 at 1156.486 kb on - strand, within A4249_RS05645 at 1156.486 kb on - strand, within A4249_RS05645 at 1156.486 kb on - strand, within A4249_RS05645 at 1156.486 kb on - strand, within A4249_RS05645 at 1156.486 kb on - strand, within A4249_RS05645 at 1156.486 kb on - strand, within A4249_RS05645 at 1156.486 kb on - strand, within A4249_RS05645 at 1156.486 kb on - strand, within A4249_RS05645 at 1156.486 kb on - strand, within A4249_RS05645 at 1156.487 kb on + strand, within A4249_RS05645 at 1156.487 kb on + strand, within A4249_RS05645 at 1156.487 kb on + strand, within A4249_RS05645 at 1156.487 kb on + strand, within A4249_RS05645 at 1156.487 kb on + strand, within A4249_RS05645 at 1156.487 kb on + strand, within A4249_RS05645 at 1156.488 kb on - strand, within A4249_RS05645 at 1156.488 kb on - strand, within A4249_RS05645 at 1156.488 kb on - strand, within A4249_RS05645 at 1156.582 kb on - strand, within A4249_RS05645 at 1156.582 kb on - strand, within A4249_RS05645 at 1156.731 kb on - strand, within A4249_RS05645 at 1156.787 kb on + strand, within A4249_RS05645 at 1156.787 kb on + strand, within A4249_RS05645 at 1156.787 kb on + strand, within A4249_RS05645 at 1156.787 kb on + strand, within A4249_RS05645 at 1156.787 kb on + strand, within A4249_RS05645 at 1156.787 kb on + strand, within A4249_RS05645 at 1156.787 kb on + strand, within A4249_RS05645 at 1156.854 kb on + strand, within A4249_RS05645 at 1156.855 kb on - strand, within A4249_RS05645 at 1156.943 kb on - strand, within A4249_RS05645 at 1157.345 kb on - strand at 1157.809 kb on + strand at 1157.809 kb on + strand at 1157.809 kb on + strand at 1157.809 kb on + strand at 1157.809 kb on + strand at 1157.810 kb on - strand at 1157.810 kb on - strand at 1157.810 kb on - strand at 1157.810 kb on - strand at 1157.810 kb on - strand at 1157.844 kb on + strand at 1157.844 kb on + strand at 1157.844 kb on + strand at 1157.844 kb on + strand at 1157.846 kb on + strand at 1157.846 kb on + strand at 1157.846 kb on + strand at 1158.135 kb on + strand at 1158.135 kb on + strand at 1158.135 kb on + strand at 1158.135 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 20C remove 1,156,348 + A4249_RS05645 0.29 -2.4 1,156,354 + A4249_RS05645 0.29 -1.0 1,156,354 + A4249_RS05645 0.29 -0.8 1,156,354 + A4249_RS05645 0.29 -0.8 1,156,354 + A4249_RS05645 0.29 -0.2 1,156,354 + A4249_RS05645 0.29 +1.2 1,156,355 - A4249_RS05645 0.29 +0.2 1,156,355 - A4249_RS05645 0.29 +2.1 1,156,355 - A4249_RS05645 0.29 +0.2 1,156,443 + A4249_RS05645 0.35 -0.8 1,156,444 - A4249_RS05645 0.35 -0.1 1,156,444 - A4249_RS05645 0.35 -0.3 1,156,453 - A4249_RS05645 0.36 -0.2 1,156,485 + A4249_RS05645 0.38 -0.4 1,156,485 + A4249_RS05645 0.38 +0.2 1,156,485 + A4249_RS05645 0.38 +0.7 1,156,485 + A4249_RS05645 0.38 -3.9 1,156,485 + A4249_RS05645 0.38 +0.5 1,156,485 + A4249_RS05645 0.38 +1.0 1,156,486 - A4249_RS05645 0.38 -0.8 1,156,486 - A4249_RS05645 0.38 +0.8 1,156,486 - A4249_RS05645 0.38 -2.4 1,156,486 - A4249_RS05645 0.38 +0.2 1,156,486 - A4249_RS05645 0.38 +0.3 1,156,486 - A4249_RS05645 0.38 -0.8 1,156,486 - A4249_RS05645 0.38 -0.4 1,156,486 - A4249_RS05645 0.38 -0.5 1,156,486 - A4249_RS05645 0.38 +0.3 1,156,486 - A4249_RS05645 0.38 +0.1 1,156,487 + A4249_RS05645 0.38 -0.8 1,156,487 + A4249_RS05645 0.38 +2.6 1,156,487 + A4249_RS05645 0.38 -2.1 1,156,487 + A4249_RS05645 0.38 +1.8 1,156,487 + A4249_RS05645 0.38 -1.5 1,156,487 + A4249_RS05645 0.38 +0.2 1,156,488 - A4249_RS05645 0.39 +0.2 1,156,488 - A4249_RS05645 0.39 +0.8 1,156,488 - A4249_RS05645 0.39 +1.8 1,156,582 - A4249_RS05645 0.45 +0.6 1,156,582 - A4249_RS05645 0.45 +0.2 1,156,731 - A4249_RS05645 0.56 +0.3 1,156,787 + A4249_RS05645 0.60 +0.5 1,156,787 + A4249_RS05645 0.60 +0.6 1,156,787 + A4249_RS05645 0.60 +0.2 1,156,787 + A4249_RS05645 0.60 -0.2 1,156,787 + A4249_RS05645 0.60 -0.4 1,156,787 + A4249_RS05645 0.60 +0.3 1,156,787 + A4249_RS05645 0.60 +0.8 1,156,854 + A4249_RS05645 0.65 -0.5 1,156,855 - A4249_RS05645 0.65 +0.5 1,156,943 - A4249_RS05645 0.71 -1.4 1,157,345 - -0.1 1,157,809 + +2.8 1,157,809 + -0.8 1,157,809 + -0.3 1,157,809 + -1.4 1,157,809 + +0.0 1,157,810 - -0.8 1,157,810 - +1.8 1,157,810 - -0.7 1,157,810 - -0.0 1,157,810 - +0.1 1,157,844 + +0.4 1,157,844 + -0.2 1,157,844 + -0.2 1,157,844 + -0.6 1,157,846 + +1.6 1,157,846 + +0.4 1,157,846 + -1.8 1,158,135 + +0.2 1,158,135 + +1.2 1,158,135 + +0.2 1,158,135 + +0.4
Or see this region's nucleotide sequence