Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS05150

Experiment: D-Glucose (C); 20C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS05145 and A4249_RS05150 are separated by 580 nucleotidesA4249_RS05150 and A4249_RS05155 are separated by 126 nucleotides A4249_RS05145: A4249_RS05145 - sensory rhodopsin transducer, at 1,058,342 to 1,058,713 _RS05145 A4249_RS05150: A4249_RS05150 - response regulator, at 1,059,294 to 1,059,650 _RS05150 A4249_RS05155: A4249_RS05155 - CHASE3 domain-containing protein, at 1,059,777 to 1,062,173 _RS05155 Position (kb) 1059 1060Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1058.332 kb on + strandat 1058.343 kb on + strandat 1058.343 kb on + strandat 1058.343 kb on + strandat 1058.344 kb on - strandat 1058.344 kb on - strandat 1058.344 kb on - strandat 1058.344 kb on - strandat 1058.352 kb on + strandat 1058.353 kb on - strandat 1058.404 kb on + strand, within A4249_RS05145at 1058.404 kb on + strand, within A4249_RS05145at 1058.404 kb on + strand, within A4249_RS05145at 1058.404 kb on + strand, within A4249_RS05145at 1058.404 kb on + strand, within A4249_RS05145at 1058.404 kb on + strand, within A4249_RS05145at 1058.405 kb on - strand, within A4249_RS05145at 1058.405 kb on - strand, within A4249_RS05145at 1058.405 kb on - strand, within A4249_RS05145at 1058.405 kb on - strand, within A4249_RS05145at 1058.419 kb on + strand, within A4249_RS05145at 1058.420 kb on - strand, within A4249_RS05145at 1058.420 kb on - strand, within A4249_RS05145at 1058.448 kb on + strand, within A4249_RS05145at 1058.448 kb on + strand, within A4249_RS05145at 1058.448 kb on + strand, within A4249_RS05145at 1058.656 kb on + strand, within A4249_RS05145at 1058.656 kb on + strand, within A4249_RS05145at 1058.656 kb on + strand, within A4249_RS05145at 1058.656 kb on + strand, within A4249_RS05145at 1058.656 kb on + strand, within A4249_RS05145at 1058.668 kb on + strand, within A4249_RS05145at 1058.669 kb on - strand, within A4249_RS05145at 1058.669 kb on - strand, within A4249_RS05145at 1058.670 kb on + strand, within A4249_RS05145at 1058.671 kb on - strand, within A4249_RS05145at 1058.713 kb on + strandat 1058.714 kb on - strandat 1058.714 kb on - strandat 1058.757 kb on + strandat 1058.758 kb on - strandat 1058.788 kb on + strandat 1058.788 kb on + strandat 1058.901 kb on - strandat 1058.947 kb on + strandat 1059.130 kb on + strandat 1059.130 kb on + strandat 1059.130 kb on + strandat 1059.131 kb on - strandat 1059.131 kb on - strandat 1059.213 kb on + strandat 1059.213 kb on + strandat 1059.213 kb on + strandat 1059.213 kb on + strandat 1059.213 kb on + strandat 1059.213 kb on + strandat 1059.213 kb on + strandat 1059.213 kb on + strandat 1059.214 kb on - strandat 1059.214 kb on - strandat 1059.214 kb on - strandat 1059.214 kb on - strandat 1059.214 kb on - strandat 1059.214 kb on - strandat 1059.222 kb on + strandat 1059.222 kb on + strandat 1059.222 kb on + strandat 1059.222 kb on + strandat 1059.223 kb on - strandat 1059.223 kb on - strandat 1059.578 kb on - strand, within A4249_RS05150at 1059.667 kb on + strandat 1059.667 kb on + strandat 1059.667 kb on + strandat 1059.667 kb on + strandat 1059.667 kb on + strandat 1059.668 kb on - strandat 1059.668 kb on - strandat 1059.668 kb on - strandat 1059.668 kb on - strandat 1059.668 kb on - strandat 1059.668 kb on - strandat 1059.668 kb on - strandat 1059.668 kb on - strandat 1059.668 kb on - strandat 1059.727 kb on - strandat 1059.787 kb on + strandat 1059.788 kb on - strandat 1059.847 kb on - strandat 1059.847 kb on - strandat 1059.847 kb on - strandat 1059.847 kb on - strandat 1059.847 kb on - strandat 1059.915 kb on + strandat 1059.915 kb on + strandat 1059.916 kb on - strandat 1059.951 kb on + strandat 1060.006 kb on - strandat 1060.006 kb on - strandat 1060.035 kb on + strand, within A4249_RS05155at 1060.035 kb on + strand, within A4249_RS05155at 1060.035 kb on + strand, within A4249_RS05155at 1060.036 kb on - strand, within A4249_RS05155at 1060.200 kb on + strand, within A4249_RS05155at 1060.201 kb on - strand, within A4249_RS05155at 1060.332 kb on + strand, within A4249_RS05155at 1060.333 kb on - strand, within A4249_RS05155

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 20C
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1,058,332 + +0.2
1,058,343 + +0.7
1,058,343 + -1.8
1,058,343 + -0.0
1,058,344 - +0.2
1,058,344 - -1.0
1,058,344 - -0.8
1,058,344 - +0.2
1,058,352 + -0.2
1,058,353 - +0.2
1,058,404 + A4249_RS05145 0.17 -2.4
1,058,404 + A4249_RS05145 0.17 +1.2
1,058,404 + A4249_RS05145 0.17 +0.1
1,058,404 + A4249_RS05145 0.17 -0.1
1,058,404 + A4249_RS05145 0.17 -0.4
1,058,404 + A4249_RS05145 0.17 +0.8
1,058,405 - A4249_RS05145 0.17 -2.4
1,058,405 - A4249_RS05145 0.17 +0.2
1,058,405 - A4249_RS05145 0.17 -2.2
1,058,405 - A4249_RS05145 0.17 -0.7
1,058,419 + A4249_RS05145 0.21 +1.0
1,058,420 - A4249_RS05145 0.21 -0.9
1,058,420 - A4249_RS05145 0.21 -0.0
1,058,448 + A4249_RS05145 0.28 -2.1
1,058,448 + A4249_RS05145 0.28 +1.6
1,058,448 + A4249_RS05145 0.28 +0.0
1,058,656 + A4249_RS05145 0.84 -1.8
1,058,656 + A4249_RS05145 0.84 +1.2
1,058,656 + A4249_RS05145 0.84 -0.8
1,058,656 + A4249_RS05145 0.84 -0.4
1,058,656 + A4249_RS05145 0.84 -0.6
1,058,668 + A4249_RS05145 0.88 -1.8
1,058,669 - A4249_RS05145 0.88 -1.4
1,058,669 - A4249_RS05145 0.88 -0.4
1,058,670 + A4249_RS05145 0.88 -0.8
1,058,671 - A4249_RS05145 0.88 -1.8
1,058,713 + +0.8
1,058,714 - -1.8
1,058,714 - -0.8
1,058,757 + +0.9
1,058,758 - -0.8
1,058,788 + +1.8
1,058,788 + -2.1
1,058,901 - +0.2
1,058,947 + +0.9
1,059,130 + -0.1
1,059,130 + -3.1
1,059,130 + -0.2
1,059,131 - +1.7
1,059,131 - +0.5
1,059,213 + -0.6
1,059,213 + +0.2
1,059,213 + -0.9
1,059,213 + -0.8
1,059,213 + -0.5
1,059,213 + +0.1
1,059,213 + +0.9
1,059,213 + -1.4
1,059,214 - +0.2
1,059,214 - -0.4
1,059,214 - +1.6
1,059,214 - +0.0
1,059,214 - -0.4
1,059,214 - -0.6
1,059,222 + +1.8
1,059,222 + +1.2
1,059,222 + +1.0
1,059,222 + -0.4
1,059,223 - +0.2
1,059,223 - +0.2
1,059,578 - A4249_RS05150 0.80 -0.4
1,059,667 + +2.2
1,059,667 + -0.2
1,059,667 + +0.2
1,059,667 + +0.2
1,059,667 + +0.3
1,059,668 - +0.9
1,059,668 - -0.2
1,059,668 - +2.3
1,059,668 - +0.0
1,059,668 - -2.9
1,059,668 - +0.4
1,059,668 - +0.0
1,059,668 - +0.7
1,059,668 - +0.2
1,059,727 - +2.6
1,059,787 + -0.2
1,059,788 - -0.9
1,059,847 - +0.7
1,059,847 - +0.4
1,059,847 - +1.2
1,059,847 - -1.4
1,059,847 - -1.4
1,059,915 + -0.2
1,059,915 + -0.5
1,059,916 - -2.2
1,059,951 + +1.2
1,060,006 - -0.3
1,060,006 - -0.8
1,060,035 + A4249_RS05155 0.11 +0.6
1,060,035 + A4249_RS05155 0.11 -0.5
1,060,035 + A4249_RS05155 0.11 +0.2
1,060,036 - A4249_RS05155 0.11 +1.5
1,060,200 + A4249_RS05155 0.18 +2.2
1,060,201 - A4249_RS05155 0.18 +0.0
1,060,332 + A4249_RS05155 0.23 +0.4
1,060,333 - A4249_RS05155 0.23 -0.2

Or see this region's nucleotide sequence