Experiment: D-Glucose (C); 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS05145 and A4249_RS05150 are separated by 580 nucleotides A4249_RS05150 and A4249_RS05155 are separated by 126 nucleotides
A4249_RS05145: A4249_RS05145 - sensory rhodopsin transducer, at 1,058,342 to 1,058,713
_RS05145
A4249_RS05150: A4249_RS05150 - response regulator, at 1,059,294 to 1,059,650
_RS05150
A4249_RS05155: A4249_RS05155 - CHASE3 domain-containing protein, at 1,059,777 to 1,062,173
_RS05155
Position (kb)
1059
1060 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1058.332 kb on + strand at 1058.343 kb on + strand at 1058.343 kb on + strand at 1058.343 kb on + strand at 1058.344 kb on - strand at 1058.344 kb on - strand at 1058.344 kb on - strand at 1058.344 kb on - strand at 1058.352 kb on + strand at 1058.353 kb on - strand at 1058.404 kb on + strand, within A4249_RS05145 at 1058.404 kb on + strand, within A4249_RS05145 at 1058.404 kb on + strand, within A4249_RS05145 at 1058.404 kb on + strand, within A4249_RS05145 at 1058.404 kb on + strand, within A4249_RS05145 at 1058.404 kb on + strand, within A4249_RS05145 at 1058.405 kb on - strand, within A4249_RS05145 at 1058.405 kb on - strand, within A4249_RS05145 at 1058.405 kb on - strand, within A4249_RS05145 at 1058.405 kb on - strand, within A4249_RS05145 at 1058.419 kb on + strand, within A4249_RS05145 at 1058.420 kb on - strand, within A4249_RS05145 at 1058.420 kb on - strand, within A4249_RS05145 at 1058.448 kb on + strand, within A4249_RS05145 at 1058.448 kb on + strand, within A4249_RS05145 at 1058.448 kb on + strand, within A4249_RS05145 at 1058.656 kb on + strand, within A4249_RS05145 at 1058.656 kb on + strand, within A4249_RS05145 at 1058.656 kb on + strand, within A4249_RS05145 at 1058.656 kb on + strand, within A4249_RS05145 at 1058.656 kb on + strand, within A4249_RS05145 at 1058.668 kb on + strand, within A4249_RS05145 at 1058.669 kb on - strand, within A4249_RS05145 at 1058.669 kb on - strand, within A4249_RS05145 at 1058.670 kb on + strand, within A4249_RS05145 at 1058.671 kb on - strand, within A4249_RS05145 at 1058.713 kb on + strand at 1058.714 kb on - strand at 1058.714 kb on - strand at 1058.757 kb on + strand at 1058.758 kb on - strand at 1058.788 kb on + strand at 1058.788 kb on + strand at 1058.901 kb on - strand at 1058.947 kb on + strand at 1059.130 kb on + strand at 1059.130 kb on + strand at 1059.130 kb on + strand at 1059.131 kb on - strand at 1059.131 kb on - strand at 1059.213 kb on + strand at 1059.213 kb on + strand at 1059.213 kb on + strand at 1059.213 kb on + strand at 1059.213 kb on + strand at 1059.213 kb on + strand at 1059.213 kb on + strand at 1059.213 kb on + strand at 1059.214 kb on - strand at 1059.214 kb on - strand at 1059.214 kb on - strand at 1059.214 kb on - strand at 1059.214 kb on - strand at 1059.214 kb on - strand at 1059.222 kb on + strand at 1059.222 kb on + strand at 1059.222 kb on + strand at 1059.222 kb on + strand at 1059.223 kb on - strand at 1059.223 kb on - strand at 1059.578 kb on - strand, within A4249_RS05150 at 1059.667 kb on + strand at 1059.667 kb on + strand at 1059.667 kb on + strand at 1059.667 kb on + strand at 1059.667 kb on + strand at 1059.668 kb on - strand at 1059.668 kb on - strand at 1059.668 kb on - strand at 1059.668 kb on - strand at 1059.668 kb on - strand at 1059.668 kb on - strand at 1059.668 kb on - strand at 1059.668 kb on - strand at 1059.668 kb on - strand at 1059.727 kb on - strand at 1059.787 kb on + strand at 1059.788 kb on - strand at 1059.847 kb on - strand at 1059.847 kb on - strand at 1059.847 kb on - strand at 1059.847 kb on - strand at 1059.847 kb on - strand at 1059.915 kb on + strand at 1059.915 kb on + strand at 1059.916 kb on - strand at 1059.951 kb on + strand at 1060.006 kb on - strand at 1060.006 kb on - strand at 1060.035 kb on + strand, within A4249_RS05155 at 1060.035 kb on + strand, within A4249_RS05155 at 1060.035 kb on + strand, within A4249_RS05155 at 1060.036 kb on - strand, within A4249_RS05155 at 1060.200 kb on + strand, within A4249_RS05155 at 1060.201 kb on - strand, within A4249_RS05155 at 1060.332 kb on + strand, within A4249_RS05155 at 1060.333 kb on - strand, within A4249_RS05155
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 20C remove 1,058,332 + +0.2 1,058,343 + +0.7 1,058,343 + -1.8 1,058,343 + -0.0 1,058,344 - +0.2 1,058,344 - -1.0 1,058,344 - -0.8 1,058,344 - +0.2 1,058,352 + -0.2 1,058,353 - +0.2 1,058,404 + A4249_RS05145 0.17 -2.4 1,058,404 + A4249_RS05145 0.17 +1.2 1,058,404 + A4249_RS05145 0.17 +0.1 1,058,404 + A4249_RS05145 0.17 -0.1 1,058,404 + A4249_RS05145 0.17 -0.4 1,058,404 + A4249_RS05145 0.17 +0.8 1,058,405 - A4249_RS05145 0.17 -2.4 1,058,405 - A4249_RS05145 0.17 +0.2 1,058,405 - A4249_RS05145 0.17 -2.2 1,058,405 - A4249_RS05145 0.17 -0.7 1,058,419 + A4249_RS05145 0.21 +1.0 1,058,420 - A4249_RS05145 0.21 -0.9 1,058,420 - A4249_RS05145 0.21 -0.0 1,058,448 + A4249_RS05145 0.28 -2.1 1,058,448 + A4249_RS05145 0.28 +1.6 1,058,448 + A4249_RS05145 0.28 +0.0 1,058,656 + A4249_RS05145 0.84 -1.8 1,058,656 + A4249_RS05145 0.84 +1.2 1,058,656 + A4249_RS05145 0.84 -0.8 1,058,656 + A4249_RS05145 0.84 -0.4 1,058,656 + A4249_RS05145 0.84 -0.6 1,058,668 + A4249_RS05145 0.88 -1.8 1,058,669 - A4249_RS05145 0.88 -1.4 1,058,669 - A4249_RS05145 0.88 -0.4 1,058,670 + A4249_RS05145 0.88 -0.8 1,058,671 - A4249_RS05145 0.88 -1.8 1,058,713 + +0.8 1,058,714 - -1.8 1,058,714 - -0.8 1,058,757 + +0.9 1,058,758 - -0.8 1,058,788 + +1.8 1,058,788 + -2.1 1,058,901 - +0.2 1,058,947 + +0.9 1,059,130 + -0.1 1,059,130 + -3.1 1,059,130 + -0.2 1,059,131 - +1.7 1,059,131 - +0.5 1,059,213 + -0.6 1,059,213 + +0.2 1,059,213 + -0.9 1,059,213 + -0.8 1,059,213 + -0.5 1,059,213 + +0.1 1,059,213 + +0.9 1,059,213 + -1.4 1,059,214 - +0.2 1,059,214 - -0.4 1,059,214 - +1.6 1,059,214 - +0.0 1,059,214 - -0.4 1,059,214 - -0.6 1,059,222 + +1.8 1,059,222 + +1.2 1,059,222 + +1.0 1,059,222 + -0.4 1,059,223 - +0.2 1,059,223 - +0.2 1,059,578 - A4249_RS05150 0.80 -0.4 1,059,667 + +2.2 1,059,667 + -0.2 1,059,667 + +0.2 1,059,667 + +0.2 1,059,667 + +0.3 1,059,668 - +0.9 1,059,668 - -0.2 1,059,668 - +2.3 1,059,668 - +0.0 1,059,668 - -2.9 1,059,668 - +0.4 1,059,668 - +0.0 1,059,668 - +0.7 1,059,668 - +0.2 1,059,727 - +2.6 1,059,787 + -0.2 1,059,788 - -0.9 1,059,847 - +0.7 1,059,847 - +0.4 1,059,847 - +1.2 1,059,847 - -1.4 1,059,847 - -1.4 1,059,915 + -0.2 1,059,915 + -0.5 1,059,916 - -2.2 1,059,951 + +1.2 1,060,006 - -0.3 1,060,006 - -0.8 1,060,035 + A4249_RS05155 0.11 +0.6 1,060,035 + A4249_RS05155 0.11 -0.5 1,060,035 + A4249_RS05155 0.11 +0.2 1,060,036 - A4249_RS05155 0.11 +1.5 1,060,200 + A4249_RS05155 0.18 +2.2 1,060,201 - A4249_RS05155 0.18 +0.0 1,060,332 + A4249_RS05155 0.23 +0.4 1,060,333 - A4249_RS05155 0.23 -0.2
Or see this region's nucleotide sequence