Experiment: D-Glucose (C); 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04765 and A4249_RS04770 are separated by 144 nucleotides A4249_RS04770 and A4249_RS04775 overlap by 1 nucleotides
A4249_RS04765: A4249_RS04765 - ATP-dependent DNA helicase RecG, at 989,159 to 991,246
_RS04765
A4249_RS04770: A4249_RS04770 - succinate dehydrogenase assembly factor 2, at 991,391 to 991,732
_RS04770
A4249_RS04775: A4249_RS04775 - transcription-repair coupling factor, at 991,732 to 995,181
_RS04775
Position (kb) 991
992 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 990.585 kb on + strand, within A4249_RS04765 at 990.585 kb on + strand, within A4249_RS04765 at 990.586 kb on - strand, within A4249_RS04765 at 990.586 kb on - strand, within A4249_RS04765 at 990.586 kb on - strand, within A4249_RS04765 at 990.795 kb on + strand, within A4249_RS04765 at 990.796 kb on - strand, within A4249_RS04765 at 990.796 kb on - strand, within A4249_RS04765 at 990.796 kb on - strand, within A4249_RS04765 at 990.839 kb on - strand, within A4249_RS04765 at 990.934 kb on + strand, within A4249_RS04765 at 991.259 kb on - strand at 991.259 kb on - strand at 991.259 kb on - strand at 991.259 kb on - strand at 991.259 kb on - strand at 991.299 kb on + strand at 991.299 kb on + strand at 991.299 kb on + strand at 991.299 kb on + strand at 991.300 kb on - strand at 991.300 kb on - strand at 991.300 kb on - strand at 992.158 kb on + strand, within A4249_RS04775 at 992.158 kb on + strand, within A4249_RS04775 at 992.158 kb on + strand, within A4249_RS04775 at 992.159 kb on - strand, within A4249_RS04775 at 992.176 kb on + strand, within A4249_RS04775 at 992.176 kb on + strand, within A4249_RS04775 at 992.243 kb on - strand, within A4249_RS04775 at 992.243 kb on - strand, within A4249_RS04775 at 992.243 kb on - strand, within A4249_RS04775 at 992.420 kb on - strand, within A4249_RS04775 at 992.420 kb on - strand, within A4249_RS04775 at 992.420 kb on - strand, within A4249_RS04775 at 992.420 kb on - strand, within A4249_RS04775 at 992.459 kb on - strand, within A4249_RS04775 at 992.459 kb on - strand, within A4249_RS04775 at 992.459 kb on - strand, within A4249_RS04775 at 992.459 kb on - strand, within A4249_RS04775 at 992.459 kb on - strand, within A4249_RS04775 at 992.518 kb on + strand, within A4249_RS04775 at 992.518 kb on + strand, within A4249_RS04775 at 992.518 kb on + strand, within A4249_RS04775 at 992.518 kb on + strand, within A4249_RS04775 at 992.519 kb on - strand, within A4249_RS04775 at 992.545 kb on + strand, within A4249_RS04775 at 992.546 kb on - strand, within A4249_RS04775 at 992.629 kb on + strand, within A4249_RS04775 at 992.629 kb on + strand, within A4249_RS04775 at 992.629 kb on + strand, within A4249_RS04775 at 992.630 kb on - strand, within A4249_RS04775 at 992.630 kb on - strand, within A4249_RS04775 at 992.630 kb on - strand, within A4249_RS04775 at 992.630 kb on - strand, within A4249_RS04775 at 992.704 kb on + strand, within A4249_RS04775 at 992.704 kb on + strand, within A4249_RS04775
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 20C remove 990,585 + A4249_RS04765 0.68 -2.1 990,585 + A4249_RS04765 0.68 -0.8 990,586 - A4249_RS04765 0.68 +0.2 990,586 - A4249_RS04765 0.68 -2.1 990,586 - A4249_RS04765 0.68 -0.5 990,795 + A4249_RS04765 0.78 -2.1 990,796 - A4249_RS04765 0.78 -2.3 990,796 - A4249_RS04765 0.78 -2.3 990,796 - A4249_RS04765 0.78 +0.2 990,839 - A4249_RS04765 0.80 -0.3 990,934 + A4249_RS04765 0.85 +0.2 991,259 - +0.1 991,259 - +1.2 991,259 - +0.3 991,259 - +0.7 991,259 - +0.6 991,299 + -1.1 991,299 + +0.2 991,299 + +0.2 991,299 + +0.1 991,300 - -0.1 991,300 - -0.0 991,300 - +0.4 992,158 + A4249_RS04775 0.12 +0.8 992,158 + A4249_RS04775 0.12 +0.2 992,158 + A4249_RS04775 0.12 +1.2 992,159 - A4249_RS04775 0.12 +3.4 992,176 + A4249_RS04775 0.13 -0.6 992,176 + A4249_RS04775 0.13 -1.5 992,243 - A4249_RS04775 0.15 -2.1 992,243 - A4249_RS04775 0.15 +0.2 992,243 - A4249_RS04775 0.15 -0.8 992,420 - A4249_RS04775 0.20 -2.6 992,420 - A4249_RS04775 0.20 +0.2 992,420 - A4249_RS04775 0.20 -0.8 992,420 - A4249_RS04775 0.20 -1.1 992,459 - A4249_RS04775 0.21 -1.1 992,459 - A4249_RS04775 0.21 +2.7 992,459 - A4249_RS04775 0.21 +0.2 992,459 - A4249_RS04775 0.21 +0.2 992,459 - A4249_RS04775 0.21 -0.1 992,518 + A4249_RS04775 0.23 -1.1 992,518 + A4249_RS04775 0.23 -1.3 992,518 + A4249_RS04775 0.23 -2.9 992,518 + A4249_RS04775 0.23 +0.5 992,519 - A4249_RS04775 0.23 +0.7 992,545 + A4249_RS04775 0.24 -2.1 992,546 - A4249_RS04775 0.24 -1.1 992,629 + A4249_RS04775 0.26 -0.3 992,629 + A4249_RS04775 0.26 -0.7 992,629 + A4249_RS04775 0.26 -1.3 992,630 - A4249_RS04775 0.26 +0.0 992,630 - A4249_RS04775 0.26 -1.6 992,630 - A4249_RS04775 0.26 -0.3 992,630 - A4249_RS04775 0.26 +0.2 992,704 + A4249_RS04775 0.28 +0.2 992,704 + A4249_RS04775 0.28 +1.1
Or see this region's nucleotide sequence