Experiment: D-Glucose (C); 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03565 and A4249_RS03570 are separated by 123 nucleotides A4249_RS03570 and A4249_RS03575 are separated by 110 nucleotides A4249_RS03575 and A4249_RS03580 are separated by 116 nucleotides
A4249_RS03565: A4249_RS03565 - sorbosone dehydrogenase family protein, at 748,095 to 749,402
_RS03565
A4249_RS03570: A4249_RS03570 - TonB family protein, at 749,526 to 749,867
_RS03570
A4249_RS03575: A4249_RS03575 - LysR family transcriptional regulator, at 749,978 to 750,853
_RS03575
A4249_RS03580: A4249_RS03580 - CoA-acylating methylmalonate-semialdehyde dehydrogenase, at 750,970 to 752,472
_RS03580
Position (kb) 749
750
751 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 748.989 kb on + strand, within A4249_RS03565 at 748.989 kb on + strand, within A4249_RS03565 at 748.989 kb on + strand, within A4249_RS03565 at 748.990 kb on - strand, within A4249_RS03565 at 748.990 kb on - strand, within A4249_RS03565 at 748.990 kb on - strand, within A4249_RS03565 at 748.990 kb on - strand, within A4249_RS03565 at 749.001 kb on + strand, within A4249_RS03565 at 749.001 kb on + strand, within A4249_RS03565 at 749.002 kb on - strand, within A4249_RS03565 at 749.007 kb on + strand, within A4249_RS03565 at 749.007 kb on + strand, within A4249_RS03565 at 749.007 kb on + strand, within A4249_RS03565 at 749.007 kb on + strand, within A4249_RS03565 at 749.007 kb on + strand, within A4249_RS03565 at 749.007 kb on + strand, within A4249_RS03565 at 749.007 kb on + strand, within A4249_RS03565 at 749.007 kb on + strand, within A4249_RS03565 at 749.008 kb on - strand, within A4249_RS03565 at 749.008 kb on - strand, within A4249_RS03565 at 749.008 kb on - strand, within A4249_RS03565 at 749.008 kb on - strand, within A4249_RS03565 at 749.008 kb on - strand, within A4249_RS03565 at 749.089 kb on + strand, within A4249_RS03565 at 749.089 kb on + strand, within A4249_RS03565 at 749.090 kb on - strand, within A4249_RS03565 at 749.090 kb on - strand, within A4249_RS03565 at 749.090 kb on - strand, within A4249_RS03565 at 749.090 kb on - strand, within A4249_RS03565 at 749.211 kb on + strand, within A4249_RS03565 at 749.211 kb on + strand, within A4249_RS03565 at 749.212 kb on - strand, within A4249_RS03565 at 749.212 kb on - strand, within A4249_RS03565 at 749.401 kb on - strand at 749.443 kb on + strand at 749.443 kb on + strand at 749.443 kb on + strand at 749.443 kb on + strand at 749.443 kb on + strand at 749.443 kb on + strand at 749.444 kb on - strand at 749.444 kb on - strand at 749.459 kb on + strand at 749.459 kb on + strand at 749.459 kb on + strand at 749.459 kb on + strand at 749.460 kb on - strand at 749.467 kb on + strand at 749.467 kb on + strand at 749.507 kb on + strand at 749.507 kb on + strand at 749.507 kb on + strand at 749.507 kb on + strand at 749.508 kb on - strand at 749.508 kb on - strand at 749.508 kb on - strand at 749.508 kb on - strand at 749.516 kb on + strand at 749.516 kb on + strand at 749.516 kb on + strand at 749.516 kb on + strand at 749.516 kb on + strand at 749.516 kb on + strand at 749.517 kb on - strand at 749.517 kb on - strand at 749.517 kb on - strand at 749.517 kb on - strand at 749.517 kb on - strand at 749.517 kb on - strand at 749.709 kb on + strand, within A4249_RS03570 at 749.710 kb on - strand, within A4249_RS03570 at 749.710 kb on - strand, within A4249_RS03570 at 749.710 kb on - strand, within A4249_RS03570 at 749.785 kb on + strand, within A4249_RS03570 at 749.786 kb on - strand, within A4249_RS03570 at 749.786 kb on - strand, within A4249_RS03570 at 749.888 kb on + strand at 749.888 kb on + strand at 750.249 kb on + strand, within A4249_RS03575 at 750.249 kb on + strand, within A4249_RS03575 at 750.249 kb on + strand, within A4249_RS03575 at 750.250 kb on - strand, within A4249_RS03575 at 750.267 kb on + strand, within A4249_RS03575 at 750.267 kb on + strand, within A4249_RS03575 at 750.267 kb on + strand, within A4249_RS03575 at 750.267 kb on + strand, within A4249_RS03575 at 750.268 kb on - strand, within A4249_RS03575 at 750.268 kb on - strand, within A4249_RS03575 at 750.284 kb on - strand, within A4249_RS03575 at 750.285 kb on + strand, within A4249_RS03575 at 750.285 kb on + strand, within A4249_RS03575 at 750.285 kb on + strand, within A4249_RS03575 at 750.286 kb on - strand, within A4249_RS03575 at 750.364 kb on - strand, within A4249_RS03575 at 750.364 kb on - strand, within A4249_RS03575 at 750.440 kb on - strand, within A4249_RS03575 at 750.849 kb on + strand at 750.849 kb on + strand at 750.849 kb on + strand at 750.849 kb on + strand at 750.849 kb on + strand at 750.850 kb on - strand at 750.850 kb on - strand at 750.860 kb on + strand at 750.861 kb on - strand at 750.928 kb on - strand at 750.928 kb on - strand at 751.061 kb on + strand at 751.061 kb on + strand at 751.061 kb on + strand at 751.061 kb on + strand at 751.061 kb on + strand at 751.061 kb on + strand at 751.061 kb on + strand at 751.061 kb on + strand at 751.061 kb on + strand at 751.061 kb on + strand at 751.062 kb on - strand at 751.062 kb on - strand at 751.062 kb on - strand at 751.062 kb on - strand at 751.062 kb on - strand at 751.062 kb on - strand at 751.062 kb on - strand at 751.336 kb on + strand, within A4249_RS03580 at 751.336 kb on + strand, within A4249_RS03580 at 751.336 kb on + strand, within A4249_RS03580 at 751.337 kb on - strand, within A4249_RS03580 at 751.337 kb on - strand, within A4249_RS03580 at 751.337 kb on - strand, within A4249_RS03580 at 751.337 kb on - strand, within A4249_RS03580 at 751.370 kb on - strand, within A4249_RS03580 at 751.370 kb on - strand, within A4249_RS03580 at 751.370 kb on - strand, within A4249_RS03580 at 751.370 kb on - strand, within A4249_RS03580 at 751.370 kb on - strand, within A4249_RS03580 at 751.370 kb on - strand, within A4249_RS03580 at 751.473 kb on + strand, within A4249_RS03580 at 751.473 kb on + strand, within A4249_RS03580 at 751.473 kb on + strand, within A4249_RS03580 at 751.474 kb on - strand, within A4249_RS03580 at 751.474 kb on - strand, within A4249_RS03580 at 751.474 kb on - strand, within A4249_RS03580 at 751.474 kb on - strand, within A4249_RS03580 at 751.474 kb on - strand, within A4249_RS03580 at 751.474 kb on - strand, within A4249_RS03580 at 751.663 kb on + strand, within A4249_RS03580 at 751.663 kb on + strand, within A4249_RS03580 at 751.663 kb on + strand, within A4249_RS03580 at 751.663 kb on + strand, within A4249_RS03580 at 751.663 kb on + strand, within A4249_RS03580 at 751.663 kb on + strand, within A4249_RS03580 at 751.663 kb on + strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.664 kb on - strand, within A4249_RS03580 at 751.670 kb on - strand, within A4249_RS03580 at 751.670 kb on - strand, within A4249_RS03580 at 751.670 kb on - strand, within A4249_RS03580 at 751.692 kb on + strand, within A4249_RS03580 at 751.692 kb on + strand, within A4249_RS03580 at 751.692 kb on + strand, within A4249_RS03580 at 751.692 kb on + strand, within A4249_RS03580 at 751.692 kb on + strand, within A4249_RS03580 at 751.692 kb on + strand, within A4249_RS03580 at 751.693 kb on - strand, within A4249_RS03580 at 751.693 kb on - strand, within A4249_RS03580 at 751.693 kb on - strand, within A4249_RS03580 at 751.693 kb on - strand, within A4249_RS03580 at 751.693 kb on - strand, within A4249_RS03580 at 751.693 kb on - strand, within A4249_RS03580 at 751.789 kb on + strand, within A4249_RS03580 at 751.789 kb on + strand, within A4249_RS03580 at 751.790 kb on - strand, within A4249_RS03580 at 751.790 kb on - strand, within A4249_RS03580
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 20C remove 748,989 + A4249_RS03565 0.68 -0.5 748,989 + A4249_RS03565 0.68 -0.2 748,989 + A4249_RS03565 0.68 +1.9 748,990 - A4249_RS03565 0.68 +1.3 748,990 - A4249_RS03565 0.68 -0.6 748,990 - A4249_RS03565 0.68 -1.5 748,990 - A4249_RS03565 0.68 +0.3 749,001 + A4249_RS03565 0.69 +3.3 749,001 + A4249_RS03565 0.69 -0.5 749,002 - A4249_RS03565 0.69 -0.1 749,007 + A4249_RS03565 0.70 -0.7 749,007 + A4249_RS03565 0.70 +0.0 749,007 + A4249_RS03565 0.70 +3.6 749,007 + A4249_RS03565 0.70 +0.6 749,007 + A4249_RS03565 0.70 -1.4 749,007 + A4249_RS03565 0.70 -0.4 749,007 + A4249_RS03565 0.70 -0.7 749,007 + A4249_RS03565 0.70 +1.7 749,008 - A4249_RS03565 0.70 -0.4 749,008 - A4249_RS03565 0.70 -0.0 749,008 - A4249_RS03565 0.70 +0.8 749,008 - A4249_RS03565 0.70 -0.5 749,008 - A4249_RS03565 0.70 -0.7 749,089 + A4249_RS03565 0.76 +1.7 749,089 + A4249_RS03565 0.76 +0.8 749,090 - A4249_RS03565 0.76 -1.1 749,090 - A4249_RS03565 0.76 -0.7 749,090 - A4249_RS03565 0.76 +0.4 749,090 - A4249_RS03565 0.76 +0.3 749,211 + A4249_RS03565 0.85 +0.1 749,211 + A4249_RS03565 0.85 -0.2 749,212 - A4249_RS03565 0.85 +0.1 749,212 - A4249_RS03565 0.85 +1.5 749,401 - -0.9 749,443 + +2.6 749,443 + +0.5 749,443 + -0.2 749,443 + -0.3 749,443 + -0.5 749,443 + -1.0 749,444 - -0.6 749,444 - -0.0 749,459 + -0.5 749,459 + -0.1 749,459 + -0.2 749,459 + -0.5 749,460 - -0.2 749,467 + -0.1 749,467 + -0.7 749,507 + +0.3 749,507 + -0.0 749,507 + -0.0 749,507 + -0.9 749,508 - -1.2 749,508 - +0.1 749,508 - +0.4 749,508 - -1.0 749,516 + -0.2 749,516 + -2.0 749,516 + +0.3 749,516 + -0.3 749,516 + -0.7 749,516 + +0.3 749,517 - -1.1 749,517 - -0.1 749,517 - -0.2 749,517 - -0.1 749,517 - -0.1 749,517 - -0.3 749,709 + A4249_RS03570 0.54 -0.4 749,710 - A4249_RS03570 0.54 +0.7 749,710 - A4249_RS03570 0.54 +0.3 749,710 - A4249_RS03570 0.54 -0.3 749,785 + A4249_RS03570 0.76 +0.7 749,786 - A4249_RS03570 0.76 -0.1 749,786 - A4249_RS03570 0.76 +0.9 749,888 + -2.4 749,888 + -0.5 750,249 + A4249_RS03575 0.31 +0.3 750,249 + A4249_RS03575 0.31 -0.4 750,249 + A4249_RS03575 0.31 -0.3 750,250 - A4249_RS03575 0.31 -0.4 750,267 + A4249_RS03575 0.33 -0.7 750,267 + A4249_RS03575 0.33 -0.0 750,267 + A4249_RS03575 0.33 +1.9 750,267 + A4249_RS03575 0.33 -0.8 750,268 - A4249_RS03575 0.33 +1.2 750,268 - A4249_RS03575 0.33 +0.4 750,284 - A4249_RS03575 0.35 -0.8 750,285 + A4249_RS03575 0.35 +0.6 750,285 + A4249_RS03575 0.35 -0.3 750,285 + A4249_RS03575 0.35 -0.3 750,286 - A4249_RS03575 0.35 -0.3 750,364 - A4249_RS03575 0.44 -0.3 750,364 - A4249_RS03575 0.44 -0.5 750,440 - A4249_RS03575 0.53 -0.9 750,849 + -0.1 750,849 + -0.2 750,849 + -1.2 750,849 + -1.5 750,849 + -0.2 750,850 - -0.3 750,850 - +0.5 750,860 + +0.0 750,861 - +0.5 750,928 - -0.1 750,928 - -1.7 751,061 + -0.5 751,061 + -1.3 751,061 + -1.1 751,061 + +0.3 751,061 + +0.4 751,061 + +0.3 751,061 + -1.6 751,061 + -0.7 751,061 + -1.7 751,061 + +1.3 751,062 - -0.8 751,062 - +0.7 751,062 - -0.2 751,062 - -0.3 751,062 - -0.6 751,062 - -0.5 751,062 - -0.7 751,336 + A4249_RS03580 0.24 +0.6 751,336 + A4249_RS03580 0.24 -0.1 751,336 + A4249_RS03580 0.24 -0.2 751,337 - A4249_RS03580 0.24 +0.7 751,337 - A4249_RS03580 0.24 -0.2 751,337 - A4249_RS03580 0.24 -0.5 751,337 - A4249_RS03580 0.24 +1.1 751,370 - A4249_RS03580 0.27 +0.3 751,370 - A4249_RS03580 0.27 +0.2 751,370 - A4249_RS03580 0.27 +0.1 751,370 - A4249_RS03580 0.27 -1.0 751,370 - A4249_RS03580 0.27 +0.8 751,370 - A4249_RS03580 0.27 +0.0 751,473 + A4249_RS03580 0.33 +1.8 751,473 + A4249_RS03580 0.33 -0.9 751,473 + A4249_RS03580 0.33 +0.4 751,474 - A4249_RS03580 0.34 +1.4 751,474 - A4249_RS03580 0.34 -0.2 751,474 - A4249_RS03580 0.34 -0.5 751,474 - A4249_RS03580 0.34 +0.2 751,474 - A4249_RS03580 0.34 +0.3 751,474 - A4249_RS03580 0.34 +1.4 751,663 + A4249_RS03580 0.46 +0.2 751,663 + A4249_RS03580 0.46 -0.1 751,663 + A4249_RS03580 0.46 -0.3 751,663 + A4249_RS03580 0.46 +0.5 751,663 + A4249_RS03580 0.46 -0.5 751,663 + A4249_RS03580 0.46 +0.3 751,663 + A4249_RS03580 0.46 +0.8 751,664 - A4249_RS03580 0.46 +0.7 751,664 - A4249_RS03580 0.46 +0.5 751,664 - A4249_RS03580 0.46 -0.2 751,664 - A4249_RS03580 0.46 -0.5 751,664 - A4249_RS03580 0.46 -1.3 751,664 - A4249_RS03580 0.46 +2.8 751,664 - A4249_RS03580 0.46 -0.2 751,664 - A4249_RS03580 0.46 +0.1 751,664 - A4249_RS03580 0.46 -2.4 751,664 - A4249_RS03580 0.46 -0.7 751,664 - A4249_RS03580 0.46 -0.4 751,664 - A4249_RS03580 0.46 +0.3 751,664 - A4249_RS03580 0.46 -1.3 751,664 - A4249_RS03580 0.46 -2.0 751,664 - A4249_RS03580 0.46 +0.1 751,664 - A4249_RS03580 0.46 -0.2 751,664 - A4249_RS03580 0.46 -1.5 751,664 - A4249_RS03580 0.46 +0.2 751,664 - A4249_RS03580 0.46 -0.3 751,664 - A4249_RS03580 0.46 -1.0 751,664 - A4249_RS03580 0.46 +2.3 751,664 - A4249_RS03580 0.46 +1.7 751,664 - A4249_RS03580 0.46 -0.5 751,664 - A4249_RS03580 0.46 +1.7 751,670 - A4249_RS03580 0.47 -0.5 751,670 - A4249_RS03580 0.47 -0.6 751,670 - A4249_RS03580 0.47 -2.7 751,692 + A4249_RS03580 0.48 +0.7 751,692 + A4249_RS03580 0.48 +0.2 751,692 + A4249_RS03580 0.48 +0.3 751,692 + A4249_RS03580 0.48 +0.2 751,692 + A4249_RS03580 0.48 -0.0 751,692 + A4249_RS03580 0.48 +0.7 751,693 - A4249_RS03580 0.48 +0.6 751,693 - A4249_RS03580 0.48 -0.1 751,693 - A4249_RS03580 0.48 +0.3 751,693 - A4249_RS03580 0.48 +0.5 751,693 - A4249_RS03580 0.48 -1.3 751,693 - A4249_RS03580 0.48 +0.0 751,789 + A4249_RS03580 0.54 +0.3 751,789 + A4249_RS03580 0.54 -1.2 751,790 - A4249_RS03580 0.55 -0.7 751,790 - A4249_RS03580 0.55 -1.1
Or see this region's nucleotide sequence