Experiment: D-Glucose (C); 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS02615 and A4249_RS02620 are separated by 76 nucleotides A4249_RS02620 and A4249_RS02625 are separated by 51 nucleotides A4249_RS02625 and A4249_RS02630 are separated by 90 nucleotides
A4249_RS02615: A4249_RS02615 - outer membrane protein assembly factor BamD, at 560,381 to 561,235
_RS02615
A4249_RS02620: A4249_RS02620 - DNA repair protein RecN, at 561,312 to 563,009
_RS02620
A4249_RS02625: A4249_RS02625 - hypothetical protein, at 563,061 to 563,648
_RS02625
A4249_RS02630: A4249_RS02630 - S8 family serine peptidase, at 563,739 to 564,995
_RS02630
Position (kb) 561
562
563
564 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 560.325 kb on + strand at 560.325 kb on + strand at 560.325 kb on + strand at 560.325 kb on + strand at 560.325 kb on + strand at 560.326 kb on - strand at 560.326 kb on - strand at 560.326 kb on - strand at 560.404 kb on + strand at 561.134 kb on + strand, within A4249_RS02615 at 561.479 kb on + strand at 561.479 kb on + strand at 561.479 kb on + strand at 561.480 kb on - strand at 561.480 kb on - strand at 561.480 kb on - strand at 561.633 kb on + strand, within A4249_RS02620 at 561.633 kb on + strand, within A4249_RS02620 at 561.633 kb on + strand, within A4249_RS02620 at 561.633 kb on + strand, within A4249_RS02620 at 561.633 kb on + strand, within A4249_RS02620 at 561.633 kb on + strand, within A4249_RS02620 at 561.634 kb on - strand, within A4249_RS02620 at 561.634 kb on - strand, within A4249_RS02620 at 561.634 kb on - strand, within A4249_RS02620 at 561.634 kb on - strand, within A4249_RS02620 at 561.763 kb on - strand, within A4249_RS02620 at 561.763 kb on - strand, within A4249_RS02620 at 561.946 kb on + strand, within A4249_RS02620 at 561.946 kb on + strand, within A4249_RS02620 at 561.946 kb on + strand, within A4249_RS02620 at 561.946 kb on + strand, within A4249_RS02620 at 561.946 kb on + strand, within A4249_RS02620 at 561.946 kb on + strand, within A4249_RS02620 at 561.946 kb on + strand, within A4249_RS02620 at 561.947 kb on - strand, within A4249_RS02620 at 562.221 kb on + strand, within A4249_RS02620 at 562.221 kb on + strand, within A4249_RS02620 at 562.222 kb on - strand, within A4249_RS02620 at 562.222 kb on - strand, within A4249_RS02620 at 562.413 kb on + strand, within A4249_RS02620 at 562.414 kb on - strand, within A4249_RS02620 at 562.414 kb on - strand, within A4249_RS02620 at 562.421 kb on - strand, within A4249_RS02620 at 563.007 kb on + strand at 563.008 kb on - strand at 563.121 kb on + strand, within A4249_RS02625 at 563.654 kb on + strand at 563.654 kb on + strand at 563.654 kb on + strand at 563.654 kb on + strand at 563.654 kb on + strand at 563.654 kb on + strand at 563.654 kb on + strand at 563.655 kb on - strand at 563.655 kb on - strand at 563.655 kb on - strand at 563.655 kb on - strand at 563.655 kb on - strand at 563.655 kb on - strand at 563.655 kb on - strand at 563.655 kb on - strand at 563.655 kb on - strand at 563.655 kb on - strand at 563.815 kb on + strand at 563.816 kb on - strand at 563.816 kb on - strand at 563.816 kb on - strand at 563.980 kb on + strand, within A4249_RS02630 at 563.980 kb on + strand, within A4249_RS02630
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 20C remove 560,325 + +0.6 560,325 + -4.8 560,325 + -0.3 560,325 + +0.3 560,325 + +0.7 560,326 - -2.0 560,326 - -2.7 560,326 - -3.6 560,404 + -1.1 561,134 + A4249_RS02615 0.88 -2.0 561,479 + -0.5 561,479 + +0.7 561,479 + +3.1 561,480 - -2.1 561,480 - +1.3 561,480 - +0.6 561,633 + A4249_RS02620 0.19 +0.3 561,633 + A4249_RS02620 0.19 +0.8 561,633 + A4249_RS02620 0.19 +0.1 561,633 + A4249_RS02620 0.19 +0.6 561,633 + A4249_RS02620 0.19 -0.7 561,633 + A4249_RS02620 0.19 -0.5 561,634 - A4249_RS02620 0.19 -0.8 561,634 - A4249_RS02620 0.19 +2.9 561,634 - A4249_RS02620 0.19 -0.9 561,634 - A4249_RS02620 0.19 -0.1 561,763 - A4249_RS02620 0.27 +0.4 561,763 - A4249_RS02620 0.27 -1.3 561,946 + A4249_RS02620 0.37 -2.0 561,946 + A4249_RS02620 0.37 +0.8 561,946 + A4249_RS02620 0.37 -1.5 561,946 + A4249_RS02620 0.37 -0.7 561,946 + A4249_RS02620 0.37 +0.3 561,946 + A4249_RS02620 0.37 -1.2 561,946 + A4249_RS02620 0.37 +0.9 561,947 - A4249_RS02620 0.37 +1.5 562,221 + A4249_RS02620 0.54 -1.3 562,221 + A4249_RS02620 0.54 +2.3 562,222 - A4249_RS02620 0.54 -0.7 562,222 - A4249_RS02620 0.54 -1.1 562,413 + A4249_RS02620 0.65 +0.0 562,414 - A4249_RS02620 0.65 +1.3 562,414 - A4249_RS02620 0.65 +0.3 562,421 - A4249_RS02620 0.65 -0.0 563,007 + -0.6 563,008 - -0.2 563,121 + A4249_RS02625 0.10 -1.3 563,654 + +1.3 563,654 + -0.8 563,654 + -0.1 563,654 + -1.3 563,654 + -1.4 563,654 + +0.2 563,654 + +0.9 563,655 - +0.3 563,655 - +0.4 563,655 - +1.0 563,655 - -0.6 563,655 - -0.4 563,655 - -0.1 563,655 - +1.8 563,655 - +0.3 563,655 - +0.2 563,655 - -0.2 563,815 + -0.1 563,816 - -1.0 563,816 - +0.7 563,816 - +0.2 563,980 + A4249_RS02630 0.19 +0.9 563,980 + A4249_RS02630 0.19 -0.2
Or see this region's nucleotide sequence