Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS02205

Experiment: D-Glucose (C); 20C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS02200 and A4249_RS02205 are separated by 126 nucleotidesA4249_RS02205 and A4249_RS02210 are separated by 310 nucleotidesA4249_RS02210 and A4249_RS02215 overlap by 6 nucleotides A4249_RS02200: A4249_RS02200 - UDP-glucose/GDP-mannose dehydrogenase family protein, at 464,190 to 465,512 _RS02200 A4249_RS02205: A4249_RS02205 - PhoH family protein, at 465,639 to 466,430 _RS02205 A4249_RS02210: A4249_RS02210 - gamma carbonic anhydrase family protein, at 466,741 to 467,268 _RS02210 A4249_RS02215: A4249_RS02215 - bifunctional riboflavin kinase/FAD synthetase, at 467,263 to 468,195 _RS02215 Position (kb) 465 466 467Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 465.640 kb on + strandat 465.640 kb on + strandat 465.640 kb on + strandat 465.641 kb on - strandat 465.823 kb on - strand, within A4249_RS02205at 465.853 kb on + strand, within A4249_RS02205at 465.853 kb on + strand, within A4249_RS02205at 465.853 kb on + strand, within A4249_RS02205at 465.853 kb on + strand, within A4249_RS02205at 465.853 kb on + strand, within A4249_RS02205at 465.853 kb on + strand, within A4249_RS02205at 465.853 kb on + strand, within A4249_RS02205at 465.853 kb on + strand, within A4249_RS02205at 465.853 kb on + strand, within A4249_RS02205at 465.853 kb on + strand, within A4249_RS02205at 465.853 kb on + strand, within A4249_RS02205at 465.853 kb on + strand, within A4249_RS02205at 465.853 kb on + strand, within A4249_RS02205at 465.853 kb on + strand, within A4249_RS02205at 465.854 kb on - strand, within A4249_RS02205at 465.854 kb on - strand, within A4249_RS02205at 465.854 kb on - strand, within A4249_RS02205at 465.854 kb on - strand, within A4249_RS02205at 465.854 kb on - strand, within A4249_RS02205at 465.854 kb on - strand, within A4249_RS02205at 465.854 kb on - strand, within A4249_RS02205at 465.854 kb on - strand, within A4249_RS02205at 465.854 kb on - strand, within A4249_RS02205at 465.854 kb on - strand, within A4249_RS02205at 465.854 kb on - strand, within A4249_RS02205at 465.854 kb on - strand, within A4249_RS02205at 465.854 kb on - strand, within A4249_RS02205at 465.914 kb on + strand, within A4249_RS02205at 465.914 kb on + strand, within A4249_RS02205at 465.914 kb on + strand, within A4249_RS02205at 465.914 kb on + strand, within A4249_RS02205at 465.914 kb on + strand, within A4249_RS02205at 465.915 kb on - strand, within A4249_RS02205at 465.915 kb on - strand, within A4249_RS02205at 465.915 kb on - strand, within A4249_RS02205at 465.916 kb on + strand, within A4249_RS02205at 465.916 kb on + strand, within A4249_RS02205at 465.916 kb on + strand, within A4249_RS02205at 465.917 kb on - strand, within A4249_RS02205at 465.917 kb on - strand, within A4249_RS02205at 466.001 kb on - strand, within A4249_RS02205at 466.015 kb on + strand, within A4249_RS02205at 466.015 kb on + strand, within A4249_RS02205at 466.016 kb on - strand, within A4249_RS02205at 466.150 kb on + strand, within A4249_RS02205at 466.150 kb on + strand, within A4249_RS02205at 466.150 kb on + strand, within A4249_RS02205at 466.151 kb on - strand, within A4249_RS02205at 466.151 kb on - strand, within A4249_RS02205at 466.151 kb on - strand, within A4249_RS02205at 466.258 kb on + strand, within A4249_RS02205at 466.259 kb on - strand, within A4249_RS02205at 466.289 kb on - strand, within A4249_RS02205at 466.736 kb on + strandat 466.736 kb on + strandat 466.737 kb on - strandat 466.737 kb on - strandat 466.737 kb on - strandat 466.795 kb on + strand, within A4249_RS02210at 466.795 kb on + strand, within A4249_RS02210at 466.821 kb on - strand, within A4249_RS02210at 466.823 kb on + strand, within A4249_RS02210at 466.823 kb on + strand, within A4249_RS02210at 467.026 kb on + strand, within A4249_RS02210at 467.026 kb on + strand, within A4249_RS02210at 467.027 kb on - strand, within A4249_RS02210at 467.027 kb on - strand, within A4249_RS02210at 467.027 kb on - strand, within A4249_RS02210at 467.027 kb on - strand, within A4249_RS02210at 467.221 kb on + strandat 467.221 kb on + strandat 467.221 kb on + strandat 467.221 kb on + strandat 467.221 kb on + strandat 467.221 kb on + strandat 467.221 kb on + strandat 467.221 kb on + strandat 467.221 kb on + strandat 467.221 kb on + strandat 467.221 kb on + strandat 467.221 kb on + strandat 467.221 kb on + strandat 467.221 kb on + strandat 467.221 kb on + strandat 467.221 kb on + strandat 467.222 kb on - strandat 467.222 kb on - strandat 467.222 kb on - strandat 467.222 kb on - strandat 467.222 kb on - strandat 467.222 kb on - strandat 467.222 kb on - strandat 467.222 kb on - strandat 467.222 kb on - strandat 467.222 kb on - strandat 467.222 kb on - strandat 467.264 kb on + strandat 467.264 kb on + strandat 467.264 kb on + strandat 467.265 kb on - strandat 467.265 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 20C
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465,640 + +1.6
465,640 + +0.7
465,640 + -0.4
465,641 - -0.4
465,823 - A4249_RS02205 0.23 -0.5
465,853 + A4249_RS02205 0.27 -0.1
465,853 + A4249_RS02205 0.27 +0.7
465,853 + A4249_RS02205 0.27 +0.9
465,853 + A4249_RS02205 0.27 +0.3
465,853 + A4249_RS02205 0.27 -0.7
465,853 + A4249_RS02205 0.27 -0.3
465,853 + A4249_RS02205 0.27 +0.3
465,853 + A4249_RS02205 0.27 +1.0
465,853 + A4249_RS02205 0.27 +1.7
465,853 + A4249_RS02205 0.27 -0.1
465,853 + A4249_RS02205 0.27 -0.6
465,853 + A4249_RS02205 0.27 -0.2
465,853 + A4249_RS02205 0.27 -0.7
465,853 + A4249_RS02205 0.27 -0.7
465,854 - A4249_RS02205 0.27 +1.3
465,854 - A4249_RS02205 0.27 +2.1
465,854 - A4249_RS02205 0.27 +0.0
465,854 - A4249_RS02205 0.27 -0.8
465,854 - A4249_RS02205 0.27 -0.2
465,854 - A4249_RS02205 0.27 -1.0
465,854 - A4249_RS02205 0.27 +0.8
465,854 - A4249_RS02205 0.27 +0.7
465,854 - A4249_RS02205 0.27 -3.0
465,854 - A4249_RS02205 0.27 -0.4
465,854 - A4249_RS02205 0.27 -0.4
465,854 - A4249_RS02205 0.27 +1.3
465,854 - A4249_RS02205 0.27 -0.9
465,914 + A4249_RS02205 0.35 +0.9
465,914 + A4249_RS02205 0.35 +0.7
465,914 + A4249_RS02205 0.35 +0.9
465,914 + A4249_RS02205 0.35 +0.6
465,914 + A4249_RS02205 0.35 +0.3
465,915 - A4249_RS02205 0.35 -0.7
465,915 - A4249_RS02205 0.35 -0.8
465,915 - A4249_RS02205 0.35 -0.4
465,916 + A4249_RS02205 0.35 +0.3
465,916 + A4249_RS02205 0.35 +0.3
465,916 + A4249_RS02205 0.35 +0.3
465,917 - A4249_RS02205 0.35 +0.3
465,917 - A4249_RS02205 0.35 -0.1
466,001 - A4249_RS02205 0.46 -1.3
466,015 + A4249_RS02205 0.47 -1.1
466,015 + A4249_RS02205 0.47 -0.9
466,016 - A4249_RS02205 0.48 +0.1
466,150 + A4249_RS02205 0.65 +0.7
466,150 + A4249_RS02205 0.65 +0.3
466,150 + A4249_RS02205 0.65 -0.0
466,151 - A4249_RS02205 0.65 +1.1
466,151 - A4249_RS02205 0.65 +0.3
466,151 - A4249_RS02205 0.65 +0.6
466,258 + A4249_RS02205 0.78 -0.1
466,259 - A4249_RS02205 0.78 +1.0
466,289 - A4249_RS02205 0.82 -0.1
466,736 + -0.3
466,736 + +2.9
466,737 - +2.3
466,737 - +0.3
466,737 - +0.3
466,795 + A4249_RS02210 0.10 +0.9
466,795 + A4249_RS02210 0.10 +0.3
466,821 - A4249_RS02210 0.15 -0.7
466,823 + A4249_RS02210 0.16 +1.9
466,823 + A4249_RS02210 0.16 +1.1
467,026 + A4249_RS02210 0.54 +0.2
467,026 + A4249_RS02210 0.54 -0.4
467,027 - A4249_RS02210 0.54 +1.5
467,027 - A4249_RS02210 0.54 +0.3
467,027 - A4249_RS02210 0.54 +0.7
467,027 - A4249_RS02210 0.54 -0.3
467,221 + -0.2
467,221 + +0.7
467,221 + -1.7
467,221 + +0.3
467,221 + -1.0
467,221 + +0.3
467,221 + -0.2
467,221 + +0.3
467,221 + -1.5
467,221 + +0.3
467,221 + -1.0
467,221 + -0.8
467,221 + +0.4
467,221 + -1.4
467,221 + -1.9
467,221 + +0.1
467,222 - -1.4
467,222 - -0.4
467,222 - +0.3
467,222 - -1.0
467,222 - +1.7
467,222 - -0.8
467,222 - +1.2
467,222 - +0.7
467,222 - +1.2
467,222 - -2.7
467,222 - -0.2
467,264 + +1.3
467,264 + +0.1
467,264 + -0.4
467,265 - -2.0
467,265 - -0.7

Or see this region's nucleotide sequence