Experiment: D-Glucose (C); 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS01540 and A4249_RS01545 are separated by 12 nucleotides A4249_RS01545 and A4249_RS01550 are separated by 15 nucleotides A4249_RS01550 and A4249_RS01555 are separated by 107 nucleotides A4249_RS01555 and A4249_RS01560 are separated by 0 nucleotides
A4249_RS01540: A4249_RS01540 - chromosome segregation protein SMC, at 287,605 to 291,042
_RS01540
A4249_RS01545: A4249_RS01545 - thioredoxin domain-containing protein, at 291,055 to 291,666
_RS01545
A4249_RS01550: A4249_RS01550 - DsbA family protein, at 291,682 to 292,326
_RS01550
A4249_RS01555: A4249_RS01555 - response regulator, at 292,434 to 292,889
_RS01555
A4249_RS01560: A4249_RS01560 - histidine kinase dimerization/phosphoacceptor domain -containing protein, at 292,890 to 293,984
_RS01560
Position (kb) 291
292
293 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2 at 290.980 kb on - strand at 290.980 kb on - strand at 291.056 kb on + strand at 291.056 kb on + strand at 291.108 kb on + strand at 291.109 kb on - strand at 291.335 kb on + strand, within A4249_RS01545 at 291.336 kb on - strand, within A4249_RS01545 at 291.336 kb on - strand, within A4249_RS01545 at 291.442 kb on - strand, within A4249_RS01545 at 291.442 kb on - strand, within A4249_RS01545 at 291.442 kb on - strand, within A4249_RS01545 at 291.443 kb on + strand, within A4249_RS01545 at 291.443 kb on + strand, within A4249_RS01545 at 291.443 kb on + strand, within A4249_RS01545 at 291.443 kb on + strand, within A4249_RS01545 at 291.443 kb on + strand, within A4249_RS01545 at 291.443 kb on + strand, within A4249_RS01545 at 291.443 kb on + strand, within A4249_RS01545 at 291.443 kb on + strand, within A4249_RS01545 at 291.444 kb on - strand, within A4249_RS01545 at 291.444 kb on - strand, within A4249_RS01545 at 291.444 kb on - strand, within A4249_RS01545 at 291.444 kb on - strand, within A4249_RS01545 at 291.444 kb on - strand, within A4249_RS01545 at 291.444 kb on - strand, within A4249_RS01545 at 291.444 kb on - strand, within A4249_RS01545 at 291.444 kb on - strand, within A4249_RS01545 at 291.444 kb on - strand, within A4249_RS01545 at 291.444 kb on - strand, within A4249_RS01545 at 291.444 kb on - strand, within A4249_RS01545 at 291.512 kb on + strand, within A4249_RS01545 at 291.512 kb on + strand, within A4249_RS01545 at 291.512 kb on + strand, within A4249_RS01545 at 291.513 kb on - strand, within A4249_RS01545 at 291.552 kb on + strand, within A4249_RS01545 at 291.552 kb on + strand, within A4249_RS01545 at 291.553 kb on - strand, within A4249_RS01545 at 291.553 kb on - strand, within A4249_RS01545 at 291.593 kb on - strand, within A4249_RS01545 at 291.684 kb on - strand at 291.684 kb on - strand at 291.684 kb on - strand at 291.684 kb on - strand at 292.389 kb on + strand at 292.390 kb on - strand at 292.390 kb on - strand at 292.394 kb on + strand at 292.394 kb on + strand at 292.394 kb on + strand at 292.394 kb on + strand at 292.394 kb on + strand at 292.395 kb on - strand at 292.395 kb on - strand at 292.395 kb on - strand at 292.435 kb on + strand at 292.435 kb on + strand at 292.436 kb on - strand at 292.436 kb on - strand at 292.436 kb on - strand at 292.515 kb on + strand, within A4249_RS01555 at 292.515 kb on + strand, within A4249_RS01555 at 292.515 kb on + strand, within A4249_RS01555 at 292.515 kb on + strand, within A4249_RS01555 at 292.515 kb on + strand, within A4249_RS01555 at 292.516 kb on - strand, within A4249_RS01555 at 292.516 kb on - strand, within A4249_RS01555 at 292.516 kb on - strand, within A4249_RS01555 at 292.891 kb on + strand at 293.267 kb on + strand, within A4249_RS01560 at 293.267 kb on + strand, within A4249_RS01560 at 293.267 kb on + strand, within A4249_RS01560 at 293.267 kb on + strand, within A4249_RS01560 at 293.268 kb on - strand, within A4249_RS01560 at 293.268 kb on - strand, within A4249_RS01560 at 293.308 kb on + strand, within A4249_RS01560 at 293.308 kb on + strand, within A4249_RS01560 at 293.308 kb on + strand, within A4249_RS01560 at 293.308 kb on + strand, within A4249_RS01560 at 293.308 kb on + strand, within A4249_RS01560 at 293.309 kb on - strand, within A4249_RS01560 at 293.309 kb on - strand, within A4249_RS01560 at 293.309 kb on - strand, within A4249_RS01560 at 293.309 kb on - strand, within A4249_RS01560 at 293.309 kb on - strand, within A4249_RS01560
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 20C remove 290,980 - -0.4 290,980 - +0.3 291,056 + -0.7 291,056 + -0.7 291,108 + -1.7 291,109 - +0.1 291,335 + A4249_RS01545 0.46 -2.7 291,336 - A4249_RS01545 0.46 -0.3 291,336 - A4249_RS01545 0.46 -1.5 291,442 - A4249_RS01545 0.63 -2.1 291,442 - A4249_RS01545 0.63 +0.9 291,442 - A4249_RS01545 0.63 -0.3 291,443 + A4249_RS01545 0.63 -0.4 291,443 + A4249_RS01545 0.63 -1.0 291,443 + A4249_RS01545 0.63 -1.3 291,443 + A4249_RS01545 0.63 +1.9 291,443 + A4249_RS01545 0.63 -1.3 291,443 + A4249_RS01545 0.63 -2.8 291,443 + A4249_RS01545 0.63 -2.0 291,443 + A4249_RS01545 0.63 -2.0 291,444 - A4249_RS01545 0.64 -0.8 291,444 - A4249_RS01545 0.64 +0.9 291,444 - A4249_RS01545 0.64 -1.3 291,444 - A4249_RS01545 0.64 -1.1 291,444 - A4249_RS01545 0.64 -0.4 291,444 - A4249_RS01545 0.64 +0.7 291,444 - A4249_RS01545 0.64 -0.5 291,444 - A4249_RS01545 0.64 +2.1 291,444 - A4249_RS01545 0.64 -1.2 291,444 - A4249_RS01545 0.64 -0.2 291,444 - A4249_RS01545 0.64 +0.3 291,512 + A4249_RS01545 0.75 +1.3 291,512 + A4249_RS01545 0.75 -1.3 291,512 + A4249_RS01545 0.75 +0.3 291,513 - A4249_RS01545 0.75 -0.2 291,552 + A4249_RS01545 0.81 -0.7 291,552 + A4249_RS01545 0.81 -1.3 291,553 - A4249_RS01545 0.81 -0.5 291,553 - A4249_RS01545 0.81 -1.7 291,593 - A4249_RS01545 0.88 -0.6 291,684 - +0.1 291,684 - -0.7 291,684 - -6.7 291,684 - +0.1 292,389 + -1.7 292,390 - -2.0 292,390 - +0.9 292,394 + -1.1 292,394 + -0.8 292,394 + +0.3 292,394 + +0.3 292,394 + -0.1 292,395 - -0.7 292,395 - +0.3 292,395 - -0.3 292,435 + +2.3 292,435 + -1.1 292,436 - +0.1 292,436 - +1.9 292,436 - +0.9 292,515 + A4249_RS01555 0.18 +0.1 292,515 + A4249_RS01555 0.18 +0.6 292,515 + A4249_RS01555 0.18 -0.7 292,515 + A4249_RS01555 0.18 -1.3 292,515 + A4249_RS01555 0.18 +0.3 292,516 - A4249_RS01555 0.18 -1.3 292,516 - A4249_RS01555 0.18 -0.6 292,516 - A4249_RS01555 0.18 -0.2 292,891 + +0.3 293,267 + A4249_RS01560 0.34 +2.2 293,267 + A4249_RS01560 0.34 +0.4 293,267 + A4249_RS01560 0.34 +0.1 293,267 + A4249_RS01560 0.34 -0.8 293,268 - A4249_RS01560 0.35 +0.6 293,268 - A4249_RS01560 0.35 -0.5 293,308 + A4249_RS01560 0.38 -2.5 293,308 + A4249_RS01560 0.38 +1.9 293,308 + A4249_RS01560 0.38 -1.3 293,308 + A4249_RS01560 0.38 +2.5 293,308 + A4249_RS01560 0.38 -0.4 293,309 - A4249_RS01560 0.38 -1.5 293,309 - A4249_RS01560 0.38 -0.8 293,309 - A4249_RS01560 0.38 -0.4 293,309 - A4249_RS01560 0.38 -0.7 293,309 - A4249_RS01560 0.38 +0.3
Or see this region's nucleotide sequence