Experiment: D-Glucose (C); 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00955 and A4249_RS00960 are separated by 203 nucleotides A4249_RS00960 and A4249_RS00965 are separated by 100 nucleotides A4249_RS00965 and A4249_RS00970 overlap by 1 nucleotides
A4249_RS00955: A4249_RS00955 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, at 177,872 to 178,750
_RS00955
A4249_RS00960: A4249_RS00960 - fasciclin domain-containing protein, at 178,954 to 179,850
_RS00960
A4249_RS00965: A4249_RS00965 - glycine--tRNA ligase subunit alpha, at 179,951 to 180,844
_RS00965
A4249_RS00970: A4249_RS00970 - glycine--tRNA ligase subunit beta, at 180,844 to 183,009
_RS00970
Position (kb) 178
179
180 Strain fitness (log2 ratio) -1
0
1
2 at 179.389 kb on + strand, within A4249_RS00960 at 179.389 kb on + strand, within A4249_RS00960 at 179.389 kb on + strand, within A4249_RS00960 at 179.389 kb on + strand, within A4249_RS00960 at 179.389 kb on + strand, within A4249_RS00960 at 179.389 kb on + strand, within A4249_RS00960 at 179.389 kb on + strand, within A4249_RS00960 at 179.389 kb on + strand, within A4249_RS00960 at 179.389 kb on + strand, within A4249_RS00960 at 179.390 kb on - strand, within A4249_RS00960 at 179.390 kb on - strand, within A4249_RS00960 at 179.390 kb on - strand, within A4249_RS00960 at 179.390 kb on - strand, within A4249_RS00960 at 179.390 kb on - strand, within A4249_RS00960 at 179.390 kb on - strand, within A4249_RS00960 at 179.390 kb on - strand, within A4249_RS00960 at 179.447 kb on + strand, within A4249_RS00960 at 179.448 kb on - strand, within A4249_RS00960 at 179.908 kb on - strand at 179.908 kb on - strand at 180.815 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 20C remove 179,389 + A4249_RS00960 0.48 -0.2 179,389 + A4249_RS00960 0.48 +0.4 179,389 + A4249_RS00960 0.48 -0.7 179,389 + A4249_RS00960 0.48 +0.4 179,389 + A4249_RS00960 0.48 -0.2 179,389 + A4249_RS00960 0.48 +0.5 179,389 + A4249_RS00960 0.48 -1.3 179,389 + A4249_RS00960 0.48 -1.0 179,389 + A4249_RS00960 0.48 +0.5 179,390 - A4249_RS00960 0.49 -0.3 179,390 - A4249_RS00960 0.49 -0.5 179,390 - A4249_RS00960 0.49 +0.1 179,390 - A4249_RS00960 0.49 -0.3 179,390 - A4249_RS00960 0.49 -1.2 179,390 - A4249_RS00960 0.49 -0.2 179,390 - A4249_RS00960 0.49 +0.1 179,447 + A4249_RS00960 0.55 -1.1 179,448 - A4249_RS00960 0.55 +0.4 179,908 - +2.7 179,908 - +0.7 180,815 + +0.3
Or see this region's nucleotide sequence