Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_04194

Experiment: HB-P24 MOI10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	HB-P24 MOI10
4,411,429	-		OHPLBJKB_04192	0.87	-2.0
4,411,468	-		OHPLBJKB_04192	0.89	+0.5
4,411,612	-				+0.2
4,411,615	+				+0.0
4,411,616	-				-0.3
4,411,812	+				+0.9
4,411,813	-				-0.9
4,411,873	+		OHPLBJKB_04193	0.16	-0.3
4,411,874	-		OHPLBJKB_04193	0.16	-1.6
4,411,996	+		OHPLBJKB_04193	0.35	+1.1
4,412,009	-		OHPLBJKB_04193	0.37	-1.1
4,412,012	+		OHPLBJKB_04193	0.38	-0.1
4,412,012	+		OHPLBJKB_04193	0.38	-1.6
4,412,012	+		OHPLBJKB_04193	0.38	-1.0
4,412,012	+		OHPLBJKB_04193	0.38	+0.1
4,412,013	-		OHPLBJKB_04193	0.38	+0.3
4,412,169	+		OHPLBJKB_04193	0.63	+1.9
4,412,169	+		OHPLBJKB_04193	0.63	-0.1
4,412,170	-		OHPLBJKB_04193	0.63	-1.2
4,412,170	-		OHPLBJKB_04193	0.63	-1.7
4,412,173	+		OHPLBJKB_04193	0.63	-0.9
4,412,174	-		OHPLBJKB_04193	0.64	-1.2
4,412,213	-		OHPLBJKB_04193	0.70	-0.9
4,412,221	+		OHPLBJKB_04193	0.71	-0.2
4,412,221	+		OHPLBJKB_04193	0.71	+0.7
4,412,222	-		OHPLBJKB_04193	0.71	-0.1
4,412,314	+		OHPLBJKB_04193	0.86	+1.9
4,412,314	+		OHPLBJKB_04193	0.86	-0.7
4,412,315	-		OHPLBJKB_04193	0.86	-0.9
4,412,315	-		OHPLBJKB_04193	0.86	+0.3
4,412,319	+		OHPLBJKB_04193	0.87	+0.3
4,412,320	-		OHPLBJKB_04193	0.87	-0.4
4,412,320	-		OHPLBJKB_04193	0.87	-0.3
4,412,320	-		OHPLBJKB_04193	0.87	-0.8
4,412,326	+		OHPLBJKB_04193	0.88	-1.3
4,412,326	+		OHPLBJKB_04193	0.88	-0.6
4,412,327	-		OHPLBJKB_04193	0.88	-1.3
4,412,338	-		OHPLBJKB_04193	0.90	+0.9
4,412,406	+				-1.4
4,412,406	+				-2.0
4,412,406	+				+0.1
4,412,406	+				-1.3
4,412,407	-				-0.1
4,412,407	-				-1.2
4,412,407	-				+0.7
4,412,407	-				-1.6
4,412,422	+				-0.9
4,412,422	+				-0.1
4,412,422	+				+1.0
4,412,422	+				+0.5
4,412,423	-				+0.0
4,412,423	-				+0.6
4,412,423	-				-0.4
4,412,423	-				-0.4
4,412,423	-				+0.1
4,412,423	-				-0.5
4,412,423	-				+0.9
4,412,426	+				-0.1
4,412,426	+				+1.3
4,412,426	+				+0.5
4,412,426	+				+0.7
4,412,426	+				-1.3
4,412,426	+				+0.4
4,412,426	+				+0.0
4,412,426	+				-2.2
4,412,426	+				+0.6
4,412,426	+				-1.1
4,412,426	+				+0.6
4,412,426	+				-0.4
4,412,426	+				+0.1
4,412,426	+				+1.5
4,412,426	+				-1.4
4,412,426	+				-0.1
4,412,426	+				+0.6
4,412,426	+				-0.9
4,412,427	-				-0.7
4,412,427	-				+0.7
4,412,427	-				+0.8
4,412,427	-				+0.1
4,412,427	-				+1.5
4,412,427	-				-0.6
4,412,427	-				-0.7
4,412,433	+				+0.4
4,412,434	-				-0.4
4,412,474	+				-0.4
4,412,500	+				+0.0
4,412,575	+		OHPLBJKB_04194	0.16	-0.3
4,412,661	-		OHPLBJKB_04194	0.25	-0.6
4,412,664	-		OHPLBJKB_04194	0.25	+0.6
4,412,738	+		OHPLBJKB_04194	0.32	-1.0
4,412,738	+		OHPLBJKB_04194	0.32	-0.2
4,412,739	-		OHPLBJKB_04194	0.33	+0.2
4,412,739	-		OHPLBJKB_04194	0.33	-0.8
4,412,739	-		OHPLBJKB_04194	0.33	-0.0
4,412,812	-		OHPLBJKB_04194	0.40	+0.5
4,412,907	+		OHPLBJKB_04194	0.50	+0.4
4,412,916	-		OHPLBJKB_04194	0.50	-0.4
4,412,950	+		OHPLBJKB_04194	0.54	-1.0
4,412,950	+		OHPLBJKB_04194	0.54	+0.2
4,412,951	-		OHPLBJKB_04194	0.54	-0.5
4,413,012	-		OHPLBJKB_04194	0.60	+0.3
4,413,012	-		OHPLBJKB_04194	0.60	-0.0
4,413,012	-		OHPLBJKB_04194	0.60	-0.8
4,413,019	-		OHPLBJKB_04194	0.61	-0.1
4,413,019	-		OHPLBJKB_04194	0.61	-0.1
4,413,022	+		OHPLBJKB_04194	0.61	-0.2
4,413,022	+		OHPLBJKB_04194	0.61	-0.6
4,413,053	+		OHPLBJKB_04194	0.64	-0.2
4,413,053	+		OHPLBJKB_04194	0.64	+0.2
4,413,172	-		OHPLBJKB_04194	0.76	-0.0
4,413,295	+		OHPLBJKB_04194	0.89	-0.1
4,413,296	-		OHPLBJKB_04194	0.89	+0.6
4,413,296	-		OHPLBJKB_04194	0.89	-1.7
4,413,312	-				-0.1
4,413,386	+				-0.3
4,413,425	-				-0.7
4,413,472	+				-0.6
4,413,489	+				-0.3
4,413,489	+				+0.0
4,413,490	-				-0.0
4,413,490	-				-0.0
4,413,536	+		OHPLBJKB_04195	0.20	-0.2
4,413,596	+		OHPLBJKB_04195	0.43	+1.1
4,413,596	+		OHPLBJKB_04195	0.43	-0.8
4,413,596	+		OHPLBJKB_04195	0.43	-0.3
4,413,596	+		OHPLBJKB_04195	0.43	+0.8
4,413,597	-		OHPLBJKB_04195	0.43	-0.8
4,413,681	+		OHPLBJKB_04195	0.74	-0.9
4,413,723	+		OHPLBJKB_04195	0.90	-0.2
4,413,723	+		OHPLBJKB_04195	0.90	-3.2
4,413,724	-				-0.2
4,413,741	+				-0.3
4,413,742	-				+0.9
4,413,751	-				+0.1
4,413,753	+				+0.5
4,413,754	-				-1.5
4,413,754	-				+0.0
4,413,754	-				-1.2
4,413,763	+				-0.4
4,413,839	+				-0.1
4,413,840	-				-0.4
4,413,887	+		OHPLBJKB_04196	0.11	+0.9
4,413,924	-		OHPLBJKB_04196	0.18	+0.1
4,413,949	-		OHPLBJKB_04196	0.22	+1.2
4,413,949	-		OHPLBJKB_04196	0.22	-0.4
4,414,130	-		OHPLBJKB_04196	0.53	+0.1
4,414,130	-		OHPLBJKB_04196	0.53	-0.4
4,414,130	-		OHPLBJKB_04196	0.53	-1.0
4,414,232	+		OHPLBJKB_04196	0.70	-0.1
4,414,254	-		OHPLBJKB_04196	0.74	-0.3
4,414,254	-		OHPLBJKB_04196	0.74	+1.3
4,414,256	+		OHPLBJKB_04196	0.75	+0.0
4,414,256	+		OHPLBJKB_04196	0.75	+0.1
4,414,257	-		OHPLBJKB_04196	0.75	-0.2
4,414,264	+		OHPLBJKB_04196	0.76	+0.5
4,414,264	+		OHPLBJKB_04196	0.76	+0.0
4,414,264	+		OHPLBJKB_04196	0.76	-0.5
4,414,265	-		OHPLBJKB_04196	0.76	-0.7
4,414,265	-		OHPLBJKB_04196	0.76	+1.1
4,414,299	+		OHPLBJKB_04196	0.82	+1.3
4,414,299	+		OHPLBJKB_04196	0.82	+0.0
4,414,300	-		OHPLBJKB_04196	0.82	+0.6
4,414,300	-		OHPLBJKB_04196	0.82	-0.6
4,414,300	-		OHPLBJKB_04196	0.82	-0.8
4,414,341	+		OHPLBJKB_04196	0.89	-0.1
4,414,365	+				+0.2