Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01224

Experiment: HB-P24 MOI10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	HB-P24 MOI10
1,261,086	-		OHPLBJKB_01223	0.41	-0.5
1,261,086	-		OHPLBJKB_01223	0.41	+0.3
1,261,091	+		OHPLBJKB_01223	0.42	+0.5
1,261,114	+		OHPLBJKB_01223	0.43	-0.3
1,261,115	-		OHPLBJKB_01223	0.43	-0.7
1,261,115	-		OHPLBJKB_01223	0.43	+0.5
1,261,115	-		OHPLBJKB_01223	0.43	+0.1
1,261,118	+		OHPLBJKB_01223	0.43	+0.8
1,261,118	+		OHPLBJKB_01223	0.43	-0.5
1,261,118	+		OHPLBJKB_01223	0.43	+1.1
1,261,118	+		OHPLBJKB_01223	0.43	-0.1
1,261,118	+		OHPLBJKB_01223	0.43	-0.5
1,261,137	+		OHPLBJKB_01223	0.45	-0.6
1,261,138	-		OHPLBJKB_01223	0.45	+0.4
1,261,138	-		OHPLBJKB_01223	0.45	-0.2
1,261,142	-		OHPLBJKB_01223	0.45	+0.1
1,261,184	-		OHPLBJKB_01223	0.48	-1.2
1,261,205	+		OHPLBJKB_01223	0.49	+0.4
1,261,205	+		OHPLBJKB_01223	0.49	+0.7
1,261,206	-		OHPLBJKB_01223	0.49	+0.1
1,261,323	-		OHPLBJKB_01223	0.57	-0.7
1,261,323	-		OHPLBJKB_01223	0.57	+0.3
1,261,379	-		OHPLBJKB_01223	0.60	-0.5
1,261,445	-		OHPLBJKB_01223	0.64	+0.8
1,261,445	-		OHPLBJKB_01223	0.64	+0.1
1,261,445	-		OHPLBJKB_01223	0.64	-0.1
1,261,456	+		OHPLBJKB_01223	0.65	+0.3
1,261,501	+		OHPLBJKB_01223	0.68	-0.2
1,261,565	-		OHPLBJKB_01223	0.72	-1.0
1,261,592	-		OHPLBJKB_01223	0.74	+1.0
1,261,612	+		OHPLBJKB_01223	0.75	-0.2
1,261,612	+		OHPLBJKB_01223	0.75	+0.6
1,261,612	+		OHPLBJKB_01223	0.75	-1.0
1,261,630	+		OHPLBJKB_01223	0.76	+0.3
1,261,630	+		OHPLBJKB_01223	0.76	-0.3
1,261,631	-		OHPLBJKB_01223	0.76	-0.4
1,261,668	+		OHPLBJKB_01223	0.79	+0.1
1,261,715	+		OHPLBJKB_01223	0.82	-0.9
1,261,715	+		OHPLBJKB_01223	0.82	-0.8
1,261,716	-		OHPLBJKB_01223	0.82	+0.5
1,261,777	+		OHPLBJKB_01223	0.86	-0.4
1,261,789	+		OHPLBJKB_01223	0.87	-0.0
1,261,790	-		OHPLBJKB_01223	0.87	+0.3
1,261,799	+		OHPLBJKB_01223	0.87	+0.7
1,261,862	+				+0.8
1,261,862	+				+0.7
1,261,863	-				-0.3
1,261,913	+				-0.7
1,261,913	+				+0.5
1,261,913	+				-0.2
1,261,913	+				-1.2
1,261,913	+				-0.5
1,261,914	-				-0.5
1,261,914	-				+0.4
1,261,914	-				-0.7
1,261,916	-				-0.4
1,261,916	-				-0.6
1,261,925	+				-1.4
1,261,930	+				-2.4
1,261,957	+				-0.4
1,261,998	+				+0.4
1,262,055	+				+0.1
1,262,056	-				-0.2
1,262,243	-		OHPLBJKB_01224	0.13	+0.5
1,262,248	+		OHPLBJKB_01224	0.14	-0.3
1,262,249	-		OHPLBJKB_01224	0.14	+0.3
1,262,263	+		OHPLBJKB_01224	0.15	-1.5
1,262,263	+		OHPLBJKB_01224	0.15	-0.3
1,262,263	+		OHPLBJKB_01224	0.15	-0.6
1,262,264	-		OHPLBJKB_01224	0.15	-0.4
1,262,264	-		OHPLBJKB_01224	0.15	-0.6
1,262,264	-		OHPLBJKB_01224	0.15	+0.0
1,262,264	-		OHPLBJKB_01224	0.15	-0.0
1,262,264	-		OHPLBJKB_01224	0.15	-2.4
1,262,295	+		OHPLBJKB_01224	0.17	+0.7
1,262,305	-		OHPLBJKB_01224	0.18	-1.6
1,262,546	+		OHPLBJKB_01224	0.33	-0.3
1,262,547	-		OHPLBJKB_01224	0.33	-1.0
1,262,600	+		OHPLBJKB_01224	0.37	+0.0
1,262,631	+		OHPLBJKB_01224	0.39	+0.6
1,262,632	-		OHPLBJKB_01224	0.39	-0.2
1,262,674	+		OHPLBJKB_01224	0.41	+0.7
1,262,675	-		OHPLBJKB_01224	0.42	+0.3
1,262,675	-		OHPLBJKB_01224	0.42	-0.9
1,262,817	+		OHPLBJKB_01224	0.51	+0.3
1,262,918	-		OHPLBJKB_01224	0.57	+0.5
1,262,918	-		OHPLBJKB_01224	0.57	-0.5
1,263,050	+		OHPLBJKB_01224	0.66	-0.1
1,263,051	-		OHPLBJKB_01224	0.66	-1.0
1,263,051	-		OHPLBJKB_01224	0.66	+0.3
1,263,133	-		OHPLBJKB_01224	0.71	+0.5
1,263,133	-		OHPLBJKB_01224	0.71	-0.3
1,263,183	+		OHPLBJKB_01224	0.74	+0.6
1,263,184	-		OHPLBJKB_01224	0.75	-1.1
1,263,307	-		OHPLBJKB_01224	0.82	+0.2
1,263,321	+		OHPLBJKB_01224	0.83	-0.7
1,263,322	-		OHPLBJKB_01224	0.83	-1.1
1,263,350	-		OHPLBJKB_01224	0.85	-0.2
1,263,411	+		OHPLBJKB_01224	0.89	-0.1
1,263,411	+		OHPLBJKB_01224	0.89	-0.7
1,263,412	-		OHPLBJKB_01224	0.89	-1.3
1,263,412	-		OHPLBJKB_01224	0.89	-0.9
1,263,415	-		OHPLBJKB_01224	0.89	+0.6
1,263,561	+				+0.6
1,263,561	+				+0.2
1,263,562	-				+0.0
1,263,569	-				-0.8
1,263,569	-				-1.1
1,263,616	-				+0.1
1,263,688	+				+0.3
1,263,689	-				+0.1
1,263,690	+				+0.6
1,263,691	-				-0.5
1,263,719	+				-0.0
1,263,719	+				-0.2
1,263,719	+				-0.4
1,263,720	-				-0.4
1,263,720	-				-0.5
1,263,720	-				-0.6
1,263,796	+		OHPLBJKB_01225	0.10	-0.4
1,263,862	-		OHPLBJKB_01225	0.14	+0.4
1,263,882	+		OHPLBJKB_01225	0.15	-0.6
1,263,882	+		OHPLBJKB_01225	0.15	-0.7
1,263,895	+		OHPLBJKB_01225	0.15	+0.4
1,263,896	-		OHPLBJKB_01225	0.15	-0.6
1,263,999	+		OHPLBJKB_01225	0.20	+0.5
1,264,000	-		OHPLBJKB_01225	0.20	+0.5
1,264,033	+		OHPLBJKB_01225	0.22	+2.4
1,264,033	+		OHPLBJKB_01225	0.22	-0.3
1,264,033	+		OHPLBJKB_01225	0.22	+0.4
1,264,034	-		OHPLBJKB_01225	0.22	+0.4
1,264,034	-		OHPLBJKB_01225	0.22	+0.1
1,264,038	-		OHPLBJKB_01225	0.22	-0.0
1,264,094	+		OHPLBJKB_01225	0.25	+0.4
1,264,104	+		OHPLBJKB_01225	0.25	+0.2
1,264,104	+		OHPLBJKB_01225	0.25	+0.0
1,264,105	-		OHPLBJKB_01225	0.25	-0.8
1,264,105	-		OHPLBJKB_01225	0.25	+0.5
1,264,105	-		OHPLBJKB_01225	0.25	+0.3
1,264,106	+		OHPLBJKB_01225	0.25	-0.1
1,264,106	+		OHPLBJKB_01225	0.25	-0.7
1,264,107	-		OHPLBJKB_01225	0.25	-0.0
1,264,139	+		OHPLBJKB_01225	0.27	-0.2
1,264,183	+		OHPLBJKB_01225	0.29	-0.3
1,264,184	-		OHPLBJKB_01225	0.29	-0.3
1,264,236	+		OHPLBJKB_01225	0.32	-0.2
1,264,243	+		OHPLBJKB_01225	0.32	+1.5
1,264,245	+		OHPLBJKB_01225	0.32	-1.7
1,264,294	-		OHPLBJKB_01225	0.34	-0.9
1,264,372	+		OHPLBJKB_01225	0.38	-0.6
1,264,373	-		OHPLBJKB_01225	0.38	-0.0
1,264,550	+		OHPLBJKB_01225	0.47	+0.3