Experiment: FE-KB2-T1 (Control KB Rep 2 Time 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_16770 and OLJFJH_16775 are separated by 40 nucleotides OLJFJH_16775 and OLJFJH_16780 are separated by 84 nucleotides OLJFJH_16780 and OLJFJH_16785 are separated by 137 nucleotides OLJFJH_16785 and OLJFJH_16790 are separated by 30 nucleotides
OLJFJH_16770: OLJFJH_16770 - NADP-dependent oxidoreductase, at 3,541,881 to 3,542,936
_16770
OLJFJH_16775: OLJFJH_16775 - kinase inhibitor, at 3,542,977 to 3,543,453
_16775
OLJFJH_16780: OLJFJH_16780 - 6-phosphogluconolactonase, at 3,543,538 to 3,544,530
_16780
OLJFJH_16785: OLJFJH_16785 - pyridoxal phosphatase, at 3,544,668 to 3,545,486
_16785
OLJFJH_16790: OLJFJH_16790 - molybdenum ABC transporter ATP-binding protein ModC, at 3,545,517 to 3,546,575
_16790
Position (kb) 3543
3544
3545 Strain fitness (log2 ratio) -2
-1
0
1 at 3542.547 kb on + strand, within OLJFJH_16770 at 3542.573 kb on - strand, within OLJFJH_16770 at 3542.577 kb on - strand, within OLJFJH_16770 at 3542.640 kb on + strand, within OLJFJH_16770 at 3542.697 kb on - strand, within OLJFJH_16770 at 3542.840 kb on + strand at 3542.939 kb on + strand at 3543.017 kb on + strand at 3543.032 kb on + strand, within OLJFJH_16775 at 3543.093 kb on - strand, within OLJFJH_16775 at 3543.093 kb on - strand, within OLJFJH_16775 at 3543.127 kb on + strand, within OLJFJH_16775 at 3543.128 kb on - strand, within OLJFJH_16775 at 3543.204 kb on - strand, within OLJFJH_16775 at 3543.323 kb on - strand, within OLJFJH_16775 at 3543.399 kb on + strand, within OLJFJH_16775 at 3543.400 kb on - strand, within OLJFJH_16775 at 3543.445 kb on + strand at 3543.445 kb on + strand at 3543.445 kb on + strand at 3543.445 kb on + strand at 3543.446 kb on - strand at 3543.446 kb on - strand at 3543.446 kb on - strand at 3543.446 kb on - strand at 3543.447 kb on + strand at 3543.832 kb on - strand, within OLJFJH_16780 at 3543.837 kb on + strand, within OLJFJH_16780 at 3543.838 kb on - strand, within OLJFJH_16780 at 3543.991 kb on - strand, within OLJFJH_16780 at 3544.232 kb on + strand, within OLJFJH_16780 at 3544.232 kb on + strand, within OLJFJH_16780 at 3544.270 kb on - strand, within OLJFJH_16780 at 3544.273 kb on + strand, within OLJFJH_16780 at 3544.273 kb on + strand, within OLJFJH_16780 at 3544.273 kb on + strand, within OLJFJH_16780 at 3544.274 kb on - strand, within OLJFJH_16780 at 3544.274 kb on - strand, within OLJFJH_16780 at 3544.276 kb on - strand, within OLJFJH_16780 at 3544.276 kb on - strand, within OLJFJH_16780 at 3544.276 kb on - strand, within OLJFJH_16780 at 3544.276 kb on - strand, within OLJFJH_16780 at 3544.380 kb on - strand, within OLJFJH_16780 at 3544.514 kb on + strand at 3544.608 kb on + strand at 3544.608 kb on + strand at 3544.632 kb on + strand at 3544.633 kb on - strand at 3544.633 kb on - strand at 3544.667 kb on + strand at 3544.679 kb on + strand at 3544.679 kb on + strand at 3544.680 kb on - strand at 3544.744 kb on + strand at 3544.744 kb on + strand at 3544.744 kb on + strand at 3544.875 kb on + strand, within OLJFJH_16785 at 3544.906 kb on + strand, within OLJFJH_16785 at 3544.986 kb on + strand, within OLJFJH_16785 at 3544.986 kb on + strand, within OLJFJH_16785 at 3544.986 kb on + strand, within OLJFJH_16785 at 3544.986 kb on + strand, within OLJFJH_16785 at 3545.043 kb on - strand, within OLJFJH_16785 at 3545.043 kb on - strand, within OLJFJH_16785 at 3545.043 kb on - strand, within OLJFJH_16785 at 3545.340 kb on + strand, within OLJFJH_16785 at 3545.340 kb on + strand, within OLJFJH_16785 at 3545.507 kb on + strand at 3545.508 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction FE-KB2-T1 (Control KB Rep 2 Time 1) remove 3,542,547 + OLJFJH_16770 0.63 +0.6 3,542,573 - OLJFJH_16770 0.66 -0.0 3,542,577 - OLJFJH_16770 0.66 +1.2 3,542,640 + OLJFJH_16770 0.72 +0.4 3,542,697 - OLJFJH_16770 0.77 +1.2 3,542,840 + -0.1 3,542,939 + -0.2 3,543,017 + -0.1 3,543,032 + OLJFJH_16775 0.12 +0.4 3,543,093 - OLJFJH_16775 0.24 +0.7 3,543,093 - OLJFJH_16775 0.24 -0.1 3,543,127 + OLJFJH_16775 0.31 -0.1 3,543,128 - OLJFJH_16775 0.32 -0.3 3,543,204 - OLJFJH_16775 0.48 +1.0 3,543,323 - OLJFJH_16775 0.73 -0.2 3,543,399 + OLJFJH_16775 0.88 -0.7 3,543,400 - OLJFJH_16775 0.89 -0.1 3,543,445 + +0.0 3,543,445 + -0.4 3,543,445 + +0.1 3,543,445 + -0.2 3,543,446 - -0.3 3,543,446 - -0.3 3,543,446 - -0.0 3,543,446 - +0.1 3,543,447 + -0.1 3,543,832 - OLJFJH_16780 0.30 +1.0 3,543,837 + OLJFJH_16780 0.30 -0.3 3,543,838 - OLJFJH_16780 0.30 -2.0 3,543,991 - OLJFJH_16780 0.46 -0.6 3,544,232 + OLJFJH_16780 0.70 -1.5 3,544,232 + OLJFJH_16780 0.70 -1.0 3,544,270 - OLJFJH_16780 0.74 -0.3 3,544,273 + OLJFJH_16780 0.74 -0.4 3,544,273 + OLJFJH_16780 0.74 -0.2 3,544,273 + OLJFJH_16780 0.74 -0.6 3,544,274 - OLJFJH_16780 0.74 -0.0 3,544,274 - OLJFJH_16780 0.74 -1.8 3,544,276 - OLJFJH_16780 0.74 -0.6 3,544,276 - OLJFJH_16780 0.74 -1.8 3,544,276 - OLJFJH_16780 0.74 +1.0 3,544,276 - OLJFJH_16780 0.74 -1.7 3,544,380 - OLJFJH_16780 0.85 +0.7 3,544,514 + -1.8 3,544,608 + +0.0 3,544,608 + -0.1 3,544,632 + +0.7 3,544,633 - +0.2 3,544,633 - -0.2 3,544,667 + +1.6 3,544,679 + -0.2 3,544,679 + -1.2 3,544,680 - +0.2 3,544,744 + +0.1 3,544,744 + +0.1 3,544,744 + +0.6 3,544,875 + OLJFJH_16785 0.25 +0.4 3,544,906 + OLJFJH_16785 0.29 -0.1 3,544,986 + OLJFJH_16785 0.39 -0.7 3,544,986 + OLJFJH_16785 0.39 +0.1 3,544,986 + OLJFJH_16785 0.39 +0.2 3,544,986 + OLJFJH_16785 0.39 +0.1 3,545,043 - OLJFJH_16785 0.46 +0.3 3,545,043 - OLJFJH_16785 0.46 -0.3 3,545,043 - OLJFJH_16785 0.46 +0.2 3,545,340 + OLJFJH_16785 0.82 -0.1 3,545,340 + OLJFJH_16785 0.82 -0.2 3,545,507 + +0.2 3,545,508 - +0.6
Or see this region's nucleotide sequence