Experiment: FE-KB2-T1 (Control KB Rep 2 Time 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_07180 and OLJFJH_07185 are separated by 291 nucleotides OLJFJH_07185 and OLJFJH_07190 are separated by 296 nucleotides OLJFJH_07190 and OLJFJH_07195 are separated by 127 nucleotides
OLJFJH_07180: OLJFJH_07180 - serine-type D-Ala-D-Ala carboxypeptidase, at 1,461,586 to 1,462,977
_07180
OLJFJH_07185: OLJFJH_07185 - transcription elongation factor GreA, at 1,463,269 to 1,463,751
_07185
OLJFJH_07190: OLJFJH_07190 - ribosome assembly RNA-binding protein YhbY, at 1,464,048 to 1,464,341
_07190
OLJFJH_07195: OLJFJH_07195 - 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE, at 1,464,469 to 1,465,098
_07195
Position (kb) 1463
1464 Strain fitness (log2 ratio) -1
0
1
2 at 1462.436 kb on + strand, within OLJFJH_07180 at 1462.436 kb on + strand, within OLJFJH_07180 at 1462.436 kb on + strand, within OLJFJH_07180 at 1462.437 kb on - strand, within OLJFJH_07180 at 1462.484 kb on + strand, within OLJFJH_07180 at 1462.484 kb on + strand, within OLJFJH_07180 at 1462.484 kb on + strand, within OLJFJH_07180 at 1462.485 kb on - strand, within OLJFJH_07180 at 1462.485 kb on - strand, within OLJFJH_07180 at 1462.485 kb on - strand, within OLJFJH_07180 at 1462.485 kb on - strand, within OLJFJH_07180 at 1462.485 kb on - strand, within OLJFJH_07180 at 1462.507 kb on - strand, within OLJFJH_07180 at 1462.507 kb on - strand, within OLJFJH_07180 at 1462.605 kb on + strand, within OLJFJH_07180 at 1462.605 kb on + strand, within OLJFJH_07180 at 1462.606 kb on - strand, within OLJFJH_07180 at 1462.620 kb on + strand, within OLJFJH_07180 at 1462.659 kb on - strand, within OLJFJH_07180 at 1462.665 kb on + strand, within OLJFJH_07180 at 1462.866 kb on - strand at 1462.935 kb on - strand at 1462.943 kb on + strand at 1462.944 kb on - strand at 1462.978 kb on - strand at 1462.978 kb on - strand at 1462.990 kb on - strand at 1463.052 kb on + strand at 1463.052 kb on + strand at 1463.055 kb on + strand at 1463.055 kb on + strand at 1463.056 kb on - strand at 1463.056 kb on - strand at 1463.112 kb on - strand at 1463.116 kb on - strand at 1463.216 kb on + strand at 1463.356 kb on - strand, within OLJFJH_07185 at 1463.411 kb on - strand, within OLJFJH_07185 at 1463.411 kb on - strand, within OLJFJH_07185 at 1463.489 kb on + strand, within OLJFJH_07185 at 1463.583 kb on + strand, within OLJFJH_07185 at 1463.584 kb on - strand, within OLJFJH_07185 at 1463.697 kb on + strand, within OLJFJH_07185 at 1463.697 kb on + strand, within OLJFJH_07185 at 1463.698 kb on - strand, within OLJFJH_07185 at 1463.744 kb on - strand at 1463.858 kb on + strand at 1463.858 kb on + strand at 1463.858 kb on + strand at 1463.859 kb on - strand at 1463.880 kb on + strand at 1463.881 kb on - strand at 1464.044 kb on + strand at 1464.045 kb on - strand at 1464.045 kb on - strand at 1464.147 kb on - strand, within OLJFJH_07190 at 1464.203 kb on + strand, within OLJFJH_07190 at 1464.203 kb on + strand, within OLJFJH_07190 at 1464.203 kb on + strand, within OLJFJH_07190 at 1464.204 kb on - strand, within OLJFJH_07190 at 1464.351 kb on + strand at 1464.355 kb on + strand at 1464.355 kb on + strand at 1464.382 kb on + strand at 1464.399 kb on + strand at 1464.455 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction FE-KB2-T1 (Control KB Rep 2 Time 1) remove 1,462,436 + OLJFJH_07180 0.61 +0.4 1,462,436 + OLJFJH_07180 0.61 -0.5 1,462,436 + OLJFJH_07180 0.61 +0.5 1,462,437 - OLJFJH_07180 0.61 +1.0 1,462,484 + OLJFJH_07180 0.65 -0.4 1,462,484 + OLJFJH_07180 0.65 -0.9 1,462,484 + OLJFJH_07180 0.65 +0.0 1,462,485 - OLJFJH_07180 0.65 +0.0 1,462,485 - OLJFJH_07180 0.65 -0.1 1,462,485 - OLJFJH_07180 0.65 -0.1 1,462,485 - OLJFJH_07180 0.65 -0.2 1,462,485 - OLJFJH_07180 0.65 +0.1 1,462,507 - OLJFJH_07180 0.66 +0.0 1,462,507 - OLJFJH_07180 0.66 -0.2 1,462,605 + OLJFJH_07180 0.73 -0.1 1,462,605 + OLJFJH_07180 0.73 +0.2 1,462,606 - OLJFJH_07180 0.73 -0.1 1,462,620 + OLJFJH_07180 0.74 +0.1 1,462,659 - OLJFJH_07180 0.77 -0.0 1,462,665 + OLJFJH_07180 0.78 -0.5 1,462,866 - +0.5 1,462,935 - -0.2 1,462,943 + -0.0 1,462,944 - -0.4 1,462,978 - +0.1 1,462,978 - -0.0 1,462,990 - -0.6 1,463,052 + -0.4 1,463,052 + -0.3 1,463,055 + +0.3 1,463,055 + -0.1 1,463,056 - +0.2 1,463,056 - -0.1 1,463,112 - +0.1 1,463,116 - +0.0 1,463,216 + +0.1 1,463,356 - OLJFJH_07185 0.18 -0.8 1,463,411 - OLJFJH_07185 0.29 +1.3 1,463,411 - OLJFJH_07185 0.29 -0.6 1,463,489 + OLJFJH_07185 0.46 -0.5 1,463,583 + OLJFJH_07185 0.65 -0.3 1,463,584 - OLJFJH_07185 0.65 -0.4 1,463,697 + OLJFJH_07185 0.89 -0.5 1,463,697 + OLJFJH_07185 0.89 +0.4 1,463,698 - OLJFJH_07185 0.89 -1.1 1,463,744 - +0.2 1,463,858 + -0.4 1,463,858 + +0.3 1,463,858 + +0.1 1,463,859 - +0.1 1,463,880 + -0.2 1,463,881 - +0.2 1,464,044 + +0.1 1,464,045 - -0.1 1,464,045 - +0.0 1,464,147 - OLJFJH_07190 0.34 -0.1 1,464,203 + OLJFJH_07190 0.53 +0.8 1,464,203 + OLJFJH_07190 0.53 -0.1 1,464,203 + OLJFJH_07190 0.53 -0.1 1,464,204 - OLJFJH_07190 0.53 +0.4 1,464,351 + +0.7 1,464,355 + -0.1 1,464,355 + -0.6 1,464,382 + +0.2 1,464,399 + +0.0 1,464,455 + +2.5
Or see this region's nucleotide sequence