Experiment: FE-KB2-T1 (Control KB Rep 2 Time 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_07005 and OLJFJH_07010 are separated by 15 nucleotides OLJFJH_07010 and OLJFJH_07015 are separated by 308 nucleotides OLJFJH_07015 and OLJFJH_07020 are separated by 4 nucleotides OLJFJH_07020 and OLJFJH_07025 are separated by 143 nucleotides
OLJFJH_07005: OLJFJH_07005 - 50S ribosomal protein L13, at 1,427,307 to 1,427,735
_07005
OLJFJH_07010: OLJFJH_07010 - 30S ribosomal protein S9, at 1,427,751 to 1,428,143
_07010
OLJFJH_07015: OLJFJH_07015 - stringent starvation protein A, at 1,428,452 to 1,429,093
_07015
OLJFJH_07020: OLJFJH_07020 - ClpXP protease specificity-enhancing factor, at 1,429,098 to 1,429,595
_07020
OLJFJH_07025: OLJFJH_07025 - sulfite reductase subunit alpha, at 1,429,739 to 1,431,496
_07025
Position (kb)
1428
1429
1430 Strain fitness (log2 ratio)
-2
-1
0
1 at 1428.248 kb on - strand at 1428.308 kb on - strand at 1428.308 kb on - strand at 1428.525 kb on + strand, within OLJFJH_07015 at 1428.525 kb on + strand, within OLJFJH_07015 at 1428.534 kb on + strand, within OLJFJH_07015 at 1428.535 kb on - strand, within OLJFJH_07015 at 1428.726 kb on - strand, within OLJFJH_07015 at 1428.839 kb on - strand, within OLJFJH_07015 at 1428.886 kb on + strand, within OLJFJH_07015 at 1428.898 kb on + strand, within OLJFJH_07015 at 1428.899 kb on - strand, within OLJFJH_07015 at 1428.975 kb on + strand, within OLJFJH_07015 at 1429.007 kb on + strand, within OLJFJH_07015 at 1429.008 kb on - strand, within OLJFJH_07015 at 1429.010 kb on - strand, within OLJFJH_07015 at 1429.010 kb on - strand, within OLJFJH_07015 at 1429.094 kb on + strand at 1429.094 kb on + strand at 1429.095 kb on - strand at 1429.132 kb on - strand at 1429.149 kb on + strand, within OLJFJH_07020 at 1429.150 kb on - strand, within OLJFJH_07020 at 1429.291 kb on + strand, within OLJFJH_07020 at 1429.377 kb on + strand, within OLJFJH_07020 at 1429.425 kb on + strand, within OLJFJH_07020 at 1429.426 kb on - strand, within OLJFJH_07020 at 1429.639 kb on + strand at 1429.683 kb on + strand at 1429.741 kb on - strand at 1429.743 kb on + strand at 1429.743 kb on + strand at 1429.743 kb on + strand at 1429.759 kb on - strand at 1429.788 kb on + strand at 1429.789 kb on - strand at 1429.789 kb on - strand at 1429.839 kb on + strand at 1429.839 kb on + strand at 1429.840 kb on - strand at 1429.890 kb on + strand at 1429.890 kb on + strand at 1429.891 kb on - strand at 1429.891 kb on - strand at 1429.891 kb on - strand at 1429.911 kb on - strand at 1429.956 kb on - strand, within OLJFJH_07025 at 1430.046 kb on + strand, within OLJFJH_07025 at 1430.050 kb on + strand, within OLJFJH_07025 at 1430.050 kb on + strand, within OLJFJH_07025 at 1430.050 kb on + strand, within OLJFJH_07025 at 1430.050 kb on + strand, within OLJFJH_07025 at 1430.050 kb on + strand, within OLJFJH_07025 at 1430.050 kb on + strand, within OLJFJH_07025 at 1430.050 kb on + strand, within OLJFJH_07025 at 1430.050 kb on + strand, within OLJFJH_07025 at 1430.050 kb on + strand, within OLJFJH_07025 at 1430.050 kb on + strand, within OLJFJH_07025 at 1430.050 kb on + strand, within OLJFJH_07025 at 1430.050 kb on + strand, within OLJFJH_07025 at 1430.051 kb on - strand, within OLJFJH_07025 at 1430.051 kb on - strand, within OLJFJH_07025 at 1430.051 kb on - strand, within OLJFJH_07025 at 1430.051 kb on - strand, within OLJFJH_07025 at 1430.051 kb on - strand, within OLJFJH_07025 at 1430.051 kb on - strand, within OLJFJH_07025 at 1430.052 kb on + strand, within OLJFJH_07025 at 1430.052 kb on + strand, within OLJFJH_07025 at 1430.052 kb on + strand, within OLJFJH_07025 at 1430.052 kb on + strand, within OLJFJH_07025 at 1430.052 kb on + strand, within OLJFJH_07025 at 1430.053 kb on - strand, within OLJFJH_07025 at 1430.053 kb on - strand, within OLJFJH_07025 at 1430.053 kb on - strand, within OLJFJH_07025 at 1430.053 kb on - strand, within OLJFJH_07025 at 1430.053 kb on - strand, within OLJFJH_07025
Per-strain Table
Position Strand Gene LocusTag Fraction FE-KB2-T1 (Control KB Rep 2 Time 1) remove 1,428,248 - -0.2 1,428,308 - -0.6 1,428,308 - +0.9 1,428,525 + OLJFJH_07015 0.11 -0.1 1,428,525 + OLJFJH_07015 0.11 -0.6 1,428,534 + OLJFJH_07015 0.13 -1.6 1,428,535 - OLJFJH_07015 0.13 +0.9 1,428,726 - OLJFJH_07015 0.43 -0.6 1,428,839 - OLJFJH_07015 0.60 -0.6 1,428,886 + OLJFJH_07015 0.68 +0.9 1,428,898 + OLJFJH_07015 0.69 -0.1 1,428,899 - OLJFJH_07015 0.70 +0.9 1,428,975 + OLJFJH_07015 0.81 -0.6 1,429,007 + OLJFJH_07015 0.86 -1.1 1,429,008 - OLJFJH_07015 0.87 +0.9 1,429,010 - OLJFJH_07015 0.87 -0.1 1,429,010 - OLJFJH_07015 0.87 +0.9 1,429,094 + -0.1 1,429,094 + +0.5 1,429,095 - +0.4 1,429,132 - -0.1 1,429,149 + OLJFJH_07020 0.10 +0.1 1,429,150 - OLJFJH_07020 0.10 -0.1 1,429,291 + OLJFJH_07020 0.39 +0.3 1,429,377 + OLJFJH_07020 0.56 -1.0 1,429,425 + OLJFJH_07020 0.66 +0.3 1,429,426 - OLJFJH_07020 0.66 -0.2 1,429,639 + -0.1 1,429,683 + +0.2 1,429,741 - -0.3 1,429,743 + +1.3 1,429,743 + -0.1 1,429,743 + -1.5 1,429,759 - -0.5 1,429,788 + -0.0 1,429,789 - -2.1 1,429,789 - -0.1 1,429,839 + -0.1 1,429,839 + -0.3 1,429,840 - -0.1 1,429,890 + -0.3 1,429,890 + +0.2 1,429,891 - -0.4 1,429,891 - -0.3 1,429,891 - -0.1 1,429,911 - +0.1 1,429,956 - OLJFJH_07025 0.12 +1.4 1,430,046 + OLJFJH_07025 0.17 +0.6 1,430,050 + OLJFJH_07025 0.18 -0.3 1,430,050 + OLJFJH_07025 0.18 +0.2 1,430,050 + OLJFJH_07025 0.18 -0.7 1,430,050 + OLJFJH_07025 0.18 -0.5 1,430,050 + OLJFJH_07025 0.18 -0.0 1,430,050 + OLJFJH_07025 0.18 +0.1 1,430,050 + OLJFJH_07025 0.18 -0.5 1,430,050 + OLJFJH_07025 0.18 -0.4 1,430,050 + OLJFJH_07025 0.18 -0.3 1,430,050 + OLJFJH_07025 0.18 -0.2 1,430,050 + OLJFJH_07025 0.18 +0.7 1,430,050 + OLJFJH_07025 0.18 +0.2 1,430,051 - OLJFJH_07025 0.18 -0.3 1,430,051 - OLJFJH_07025 0.18 -0.4 1,430,051 - OLJFJH_07025 0.18 -0.7 1,430,051 - OLJFJH_07025 0.18 -1.2 1,430,051 - OLJFJH_07025 0.18 -0.7 1,430,051 - OLJFJH_07025 0.18 +0.2 1,430,052 + OLJFJH_07025 0.18 -0.0 1,430,052 + OLJFJH_07025 0.18 -0.4 1,430,052 + OLJFJH_07025 0.18 +0.6 1,430,052 + OLJFJH_07025 0.18 +0.0 1,430,052 + OLJFJH_07025 0.18 -0.5 1,430,053 - OLJFJH_07025 0.18 +0.2 1,430,053 - OLJFJH_07025 0.18 -0.6 1,430,053 - OLJFJH_07025 0.18 -0.4 1,430,053 - OLJFJH_07025 0.18 -0.0 1,430,053 - OLJFJH_07025 0.18 -0.6
Or see this region's nucleotide sequence