Experiment: FE-KB2-T1 (Control KB Rep 2 Time 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_06620 and OLJFJH_06625 are separated by 12 nucleotides OLJFJH_06625 and OLJFJH_06630 are separated by 217 nucleotides OLJFJH_06630 and OLJFJH_06635 are separated by 6 nucleotides OLJFJH_06635 and OLJFJH_06640 are separated by 113 nucleotides OLJFJH_06640 and OLJFJH_06645 are separated by 269 nucleotides OLJFJH_06645 and OLJFJH_06650 are separated by 1 nucleotides
OLJFJH_06620: OLJFJH_06620 - tRNA-Thr, at 1,343,628 to 1,343,703
_06620
OLJFJH_06625: OLJFJH_06625 - tRNA-Tyr, at 1,343,716 to 1,343,800
_06625
OLJFJH_06630: OLJFJH_06630 - tRNA-Gly, at 1,344,018 to 1,344,092
_06630
OLJFJH_06635: OLJFJH_06635 - tRNA-Thr, at 1,344,099 to 1,344,174
_06635
OLJFJH_06640: OLJFJH_06640 - elongation factor Tu, at 1,344,288 to 1,345,472
_06640
OLJFJH_06645: OLJFJH_06645 - preprotein translocase subunit SecE, at 1,345,742 to 1,346,125
_06645
OLJFJH_06650: OLJFJH_06650 - transcription termination/antitermination protein NusG, at 1,346,127 to 1,346,672
_06650
Position (kb) 1344
1345
1346 Strain fitness (log2 ratio) -1
0
1 at 1343.315 kb on - strand at 1343.328 kb on + strand at 1343.336 kb on - strand at 1343.339 kb on + strand at 1343.339 kb on + strand at 1343.422 kb on + strand at 1343.551 kb on - strand at 1343.551 kb on - strand at 1343.560 kb on - strand at 1344.274 kb on + strand at 1344.335 kb on + strand at 1344.336 kb on - strand at 1344.883 kb on - strand, within OLJFJH_06640 at 1344.883 kb on - strand, within OLJFJH_06640 at 1344.883 kb on - strand, within OLJFJH_06640 at 1344.883 kb on - strand, within OLJFJH_06640 at 1344.982 kb on + strand, within OLJFJH_06640 at 1344.982 kb on + strand, within OLJFJH_06640
Per-strain Table
Position Strand Gene LocusTag Fraction FE-KB2-T1 (Control KB Rep 2 Time 1) remove 1,343,315 - -0.2 1,343,328 + -0.0 1,343,336 - -0.2 1,343,339 + +0.1 1,343,339 + -0.9 1,343,422 + -0.0 1,343,551 - -0.3 1,343,551 - +0.9 1,343,560 - +0.9 1,344,274 + -0.4 1,344,335 + -0.9 1,344,336 - -0.6 1,344,883 - OLJFJH_06640 0.50 -0.6 1,344,883 - OLJFJH_06640 0.50 -1.6 1,344,883 - OLJFJH_06640 0.50 -1.1 1,344,883 - OLJFJH_06640 0.50 -0.4 1,344,982 + OLJFJH_06640 0.59 -0.2 1,344,982 + OLJFJH_06640 0.59 -0.7
Or see this region's nucleotide sequence