Experiment: FE-KB2-T1 (Control KB Rep 2 Time 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_06095 and OLJFJH_06100 are separated by 2 nucleotides OLJFJH_06100 and OLJFJH_06105 are separated by 253 nucleotides
OLJFJH_06095: OLJFJH_06095 - cystathionine gamma-synthase, at 1,227,201 to 1,228,361
_06095
OLJFJH_06100: OLJFJH_06100 - bifunctional aspartate kinase/homoserine dehydrogenase II, at 1,228,364 to 1,230,799
_06100
OLJFJH_06105: OLJFJH_06105 - methylenetetrahydrofolate reductase, at 1,231,053 to 1,231,958
_06105
Position (kb) 1228
1229
1230
1231 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1227.420 kb on - strand, within OLJFJH_06095 at 1227.536 kb on + strand, within OLJFJH_06095 at 1227.665 kb on + strand, within OLJFJH_06095 at 1227.796 kb on - strand, within OLJFJH_06095 at 1227.893 kb on - strand, within OLJFJH_06095 at 1227.915 kb on + strand, within OLJFJH_06095 at 1227.915 kb on + strand, within OLJFJH_06095 at 1227.971 kb on + strand, within OLJFJH_06095 at 1227.971 kb on + strand, within OLJFJH_06095 at 1227.971 kb on + strand, within OLJFJH_06095 at 1227.972 kb on - strand, within OLJFJH_06095 at 1227.972 kb on - strand, within OLJFJH_06095 at 1227.972 kb on - strand, within OLJFJH_06095 at 1228.070 kb on + strand, within OLJFJH_06095 at 1228.070 kb on + strand, within OLJFJH_06095 at 1228.071 kb on - strand, within OLJFJH_06095 at 1228.099 kb on + strand, within OLJFJH_06095 at 1228.099 kb on + strand, within OLJFJH_06095 at 1228.099 kb on + strand, within OLJFJH_06095 at 1228.100 kb on - strand, within OLJFJH_06095 at 1228.159 kb on + strand, within OLJFJH_06095 at 1228.370 kb on + strand at 1228.478 kb on + strand at 1228.479 kb on - strand at 1228.479 kb on - strand at 1228.479 kb on - strand at 1228.935 kb on + strand, within OLJFJH_06100 at 1229.070 kb on + strand, within OLJFJH_06100 at 1229.071 kb on - strand, within OLJFJH_06100 at 1229.071 kb on - strand, within OLJFJH_06100 at 1229.072 kb on + strand, within OLJFJH_06100 at 1229.073 kb on - strand, within OLJFJH_06100 at 1229.073 kb on - strand, within OLJFJH_06100 at 1229.073 kb on - strand, within OLJFJH_06100 at 1229.227 kb on + strand, within OLJFJH_06100 at 1229.227 kb on + strand, within OLJFJH_06100 at 1229.227 kb on + strand, within OLJFJH_06100 at 1229.227 kb on + strand, within OLJFJH_06100 at 1229.228 kb on - strand, within OLJFJH_06100 at 1229.456 kb on + strand, within OLJFJH_06100 at 1229.456 kb on + strand, within OLJFJH_06100 at 1229.457 kb on - strand, within OLJFJH_06100 at 1229.473 kb on - strand, within OLJFJH_06100 at 1229.520 kb on + strand, within OLJFJH_06100 at 1229.520 kb on + strand, within OLJFJH_06100 at 1229.521 kb on - strand, within OLJFJH_06100 at 1229.633 kb on - strand, within OLJFJH_06100 at 1229.633 kb on - strand, within OLJFJH_06100 at 1229.698 kb on + strand, within OLJFJH_06100 at 1229.841 kb on - strand, within OLJFJH_06100 at 1229.841 kb on - strand, within OLJFJH_06100 at 1229.842 kb on + strand, within OLJFJH_06100 at 1229.843 kb on - strand, within OLJFJH_06100 at 1229.843 kb on - strand, within OLJFJH_06100 at 1229.886 kb on - strand, within OLJFJH_06100 at 1229.886 kb on - strand, within OLJFJH_06100 at 1229.940 kb on + strand, within OLJFJH_06100 at 1229.941 kb on - strand, within OLJFJH_06100 at 1230.038 kb on + strand, within OLJFJH_06100 at 1230.039 kb on - strand, within OLJFJH_06100 at 1230.083 kb on - strand, within OLJFJH_06100 at 1230.114 kb on - strand, within OLJFJH_06100 at 1230.161 kb on + strand, within OLJFJH_06100 at 1230.161 kb on + strand, within OLJFJH_06100 at 1230.161 kb on + strand, within OLJFJH_06100 at 1230.162 kb on - strand, within OLJFJH_06100 at 1230.199 kb on + strand, within OLJFJH_06100 at 1230.245 kb on - strand, within OLJFJH_06100 at 1230.245 kb on - strand, within OLJFJH_06100 at 1230.282 kb on + strand, within OLJFJH_06100 at 1230.706 kb on + strand at 1230.797 kb on + strand at 1230.797 kb on + strand at 1230.798 kb on - strand at 1230.798 kb on - strand at 1230.801 kb on - strand at 1230.801 kb on - strand at 1230.809 kb on - strand at 1230.827 kb on - strand at 1230.836 kb on + strand at 1230.837 kb on - strand at 1230.900 kb on - strand at 1230.957 kb on + strand at 1230.957 kb on + strand at 1230.958 kb on - strand at 1230.958 kb on - strand at 1230.958 kb on - strand at 1230.972 kb on + strand at 1231.268 kb on + strand, within OLJFJH_06105 at 1231.268 kb on + strand, within OLJFJH_06105 at 1231.269 kb on - strand, within OLJFJH_06105 at 1231.272 kb on - strand, within OLJFJH_06105 at 1231.281 kb on - strand, within OLJFJH_06105 at 1231.281 kb on - strand, within OLJFJH_06105 at 1231.281 kb on - strand, within OLJFJH_06105 at 1231.348 kb on + strand, within OLJFJH_06105 at 1231.348 kb on + strand, within OLJFJH_06105 at 1231.349 kb on - strand, within OLJFJH_06105 at 1231.352 kb on + strand, within OLJFJH_06105 at 1231.353 kb on - strand, within OLJFJH_06105 at 1231.353 kb on - strand, within OLJFJH_06105 at 1231.382 kb on + strand, within OLJFJH_06105 at 1231.382 kb on + strand, within OLJFJH_06105 at 1231.491 kb on - strand, within OLJFJH_06105 at 1231.559 kb on + strand, within OLJFJH_06105 at 1231.559 kb on + strand, within OLJFJH_06105 at 1231.560 kb on - strand, within OLJFJH_06105 at 1231.565 kb on + strand, within OLJFJH_06105 at 1231.566 kb on - strand, within OLJFJH_06105 at 1231.566 kb on - strand, within OLJFJH_06105 at 1231.566 kb on - strand, within OLJFJH_06105 at 1231.566 kb on - strand, within OLJFJH_06105 at 1231.593 kb on - strand, within OLJFJH_06105 at 1231.624 kb on - strand, within OLJFJH_06105 at 1231.728 kb on - strand, within OLJFJH_06105
Per-strain Table
Position Strand Gene LocusTag Fraction FE-KB2-T1 (Control KB Rep 2 Time 1) remove 1,227,420 - OLJFJH_06095 0.19 -0.8 1,227,536 + OLJFJH_06095 0.29 -0.2 1,227,665 + OLJFJH_06095 0.40 -0.9 1,227,796 - OLJFJH_06095 0.51 -0.7 1,227,893 - OLJFJH_06095 0.60 -1.3 1,227,915 + OLJFJH_06095 0.61 -0.1 1,227,915 + OLJFJH_06095 0.61 +0.0 1,227,971 + OLJFJH_06095 0.66 +0.1 1,227,971 + OLJFJH_06095 0.66 +0.0 1,227,971 + OLJFJH_06095 0.66 +0.2 1,227,972 - OLJFJH_06095 0.66 -0.4 1,227,972 - OLJFJH_06095 0.66 -0.1 1,227,972 - OLJFJH_06095 0.66 -0.0 1,228,070 + OLJFJH_06095 0.75 +0.1 1,228,070 + OLJFJH_06095 0.75 -0.4 1,228,071 - OLJFJH_06095 0.75 -1.8 1,228,099 + OLJFJH_06095 0.77 +0.1 1,228,099 + OLJFJH_06095 0.77 +0.5 1,228,099 + OLJFJH_06095 0.77 +0.5 1,228,100 - OLJFJH_06095 0.77 -1.4 1,228,159 + OLJFJH_06095 0.83 +0.4 1,228,370 + -1.6 1,228,478 + -2.9 1,228,479 - -1.5 1,228,479 - -1.3 1,228,479 - -0.1 1,228,935 + OLJFJH_06100 0.23 -2.6 1,229,070 + OLJFJH_06100 0.29 -1.7 1,229,071 - OLJFJH_06100 0.29 -0.9 1,229,071 - OLJFJH_06100 0.29 -1.1 1,229,072 + OLJFJH_06100 0.29 -1.4 1,229,073 - OLJFJH_06100 0.29 -1.6 1,229,073 - OLJFJH_06100 0.29 -1.6 1,229,073 - OLJFJH_06100 0.29 -2.1 1,229,227 + OLJFJH_06100 0.35 -1.7 1,229,227 + OLJFJH_06100 0.35 -2.0 1,229,227 + OLJFJH_06100 0.35 -1.2 1,229,227 + OLJFJH_06100 0.35 -1.3 1,229,228 - OLJFJH_06100 0.35 -1.1 1,229,456 + OLJFJH_06100 0.45 -1.7 1,229,456 + OLJFJH_06100 0.45 -1.1 1,229,457 - OLJFJH_06100 0.45 -1.4 1,229,473 - OLJFJH_06100 0.46 -1.1 1,229,520 + OLJFJH_06100 0.47 -1.7 1,229,520 + OLJFJH_06100 0.47 -0.5 1,229,521 - OLJFJH_06100 0.47 -1.1 1,229,633 - OLJFJH_06100 0.52 -2.1 1,229,633 - OLJFJH_06100 0.52 -1.5 1,229,698 + OLJFJH_06100 0.55 -1.6 1,229,841 - OLJFJH_06100 0.61 -1.3 1,229,841 - OLJFJH_06100 0.61 -0.9 1,229,842 + OLJFJH_06100 0.61 -1.8 1,229,843 - OLJFJH_06100 0.61 -0.9 1,229,843 - OLJFJH_06100 0.61 -2.0 1,229,886 - OLJFJH_06100 0.62 -0.6 1,229,886 - OLJFJH_06100 0.62 -1.1 1,229,940 + OLJFJH_06100 0.65 -1.1 1,229,941 - OLJFJH_06100 0.65 -0.8 1,230,038 + OLJFJH_06100 0.69 -1.1 1,230,039 - OLJFJH_06100 0.69 -1.8 1,230,083 - OLJFJH_06100 0.71 -0.6 1,230,114 - OLJFJH_06100 0.72 -0.6 1,230,161 + OLJFJH_06100 0.74 -2.2 1,230,161 + OLJFJH_06100 0.74 +0.5 1,230,161 + OLJFJH_06100 0.74 -1.1 1,230,162 - OLJFJH_06100 0.74 -1.1 1,230,199 + OLJFJH_06100 0.75 -1.4 1,230,245 - OLJFJH_06100 0.77 -2.0 1,230,245 - OLJFJH_06100 0.77 -0.6 1,230,282 + OLJFJH_06100 0.79 -0.8 1,230,706 + -0.0 1,230,797 + +0.6 1,230,797 + -0.2 1,230,798 - +0.1 1,230,798 - +0.0 1,230,801 - -0.2 1,230,801 - -1.6 1,230,809 - -0.3 1,230,827 - +0.0 1,230,836 + +0.1 1,230,837 - +0.2 1,230,900 - +0.1 1,230,957 + -0.2 1,230,957 + +1.4 1,230,958 - +0.3 1,230,958 - -0.6 1,230,958 - -0.2 1,230,972 + +0.7 1,231,268 + OLJFJH_06105 0.24 -0.1 1,231,268 + OLJFJH_06105 0.24 +0.0 1,231,269 - OLJFJH_06105 0.24 +0.4 1,231,272 - OLJFJH_06105 0.24 +0.2 1,231,281 - OLJFJH_06105 0.25 +0.2 1,231,281 - OLJFJH_06105 0.25 -0.1 1,231,281 - OLJFJH_06105 0.25 +1.9 1,231,348 + OLJFJH_06105 0.33 -0.0 1,231,348 + OLJFJH_06105 0.33 -0.0 1,231,349 - OLJFJH_06105 0.33 -0.6 1,231,352 + OLJFJH_06105 0.33 +0.1 1,231,353 - OLJFJH_06105 0.33 +0.1 1,231,353 - OLJFJH_06105 0.33 +0.1 1,231,382 + OLJFJH_06105 0.36 +1.2 1,231,382 + OLJFJH_06105 0.36 +0.9 1,231,491 - OLJFJH_06105 0.48 +0.1 1,231,559 + OLJFJH_06105 0.56 -0.1 1,231,559 + OLJFJH_06105 0.56 +0.4 1,231,560 - OLJFJH_06105 0.56 -0.3 1,231,565 + OLJFJH_06105 0.57 +0.1 1,231,566 - OLJFJH_06105 0.57 +0.3 1,231,566 - OLJFJH_06105 0.57 +0.0 1,231,566 - OLJFJH_06105 0.57 +1.4 1,231,566 - OLJFJH_06105 0.57 +0.1 1,231,593 - OLJFJH_06105 0.60 -0.3 1,231,624 - OLJFJH_06105 0.63 +0.2 1,231,728 - OLJFJH_06105 0.75 +0.7
Or see this region's nucleotide sequence