Experiment: FE-KB2-T1 (Control KB Rep 2 Time 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_05625 and OLJFJH_05630 are separated by 214 nucleotides OLJFJH_05630 and OLJFJH_05635 are separated by 35 nucleotides OLJFJH_05635 and OLJFJH_05640 are separated by 10 nucleotides OLJFJH_05640 and OLJFJH_05645 overlap by 4 nucleotides
OLJFJH_05625: OLJFJH_05625 - type II toxin-antitoxin system PemK/MazF family toxin, at 1,145,735 to 1,146,616
_05625
OLJFJH_05630: OLJFJH_05630 - sce7726 family protein, at 1,146,831 to 1,147,526
_05630
OLJFJH_05635: OLJFJH_05635 - beta family protein, at 1,147,562 to 1,148,674
_05635
OLJFJH_05640: OLJFJH_05640 - ImmA/IrrE family metallo-endopeptidase, at 1,148,685 to 1,149,179
_05640
OLJFJH_05645: OLJFJH_05645 - hypothetical protein, at 1,149,176 to 1,149,763
_05645
Position (kb) 1147
1148
1149 Strain fitness (log2 ratio) -2
-1
0
1 at 1146.740 kb on - strand at 1147.031 kb on + strand, within OLJFJH_05630 at 1147.311 kb on - strand, within OLJFJH_05630 at 1147.707 kb on - strand, within OLJFJH_05635 at 1147.780 kb on + strand, within OLJFJH_05635 at 1147.983 kb on + strand, within OLJFJH_05635 at 1148.221 kb on + strand, within OLJFJH_05635 at 1148.648 kb on + strand at 1148.649 kb on - strand at 1148.898 kb on + strand, within OLJFJH_05640 at 1148.901 kb on - strand, within OLJFJH_05640 at 1149.070 kb on - strand, within OLJFJH_05640 at 1149.203 kb on + strand at 1149.308 kb on + strand, within OLJFJH_05645 at 1149.345 kb on - strand, within OLJFJH_05645 at 1149.424 kb on + strand, within OLJFJH_05645
Per-strain Table
Position Strand Gene LocusTag Fraction FE-KB2-T1 (Control KB Rep 2 Time 1) remove 1,146,740 - +0.3 1,147,031 + OLJFJH_05630 0.29 -1.5 1,147,311 - OLJFJH_05630 0.69 -2.0 1,147,707 - OLJFJH_05635 0.13 -0.2 1,147,780 + OLJFJH_05635 0.20 -1.4 1,147,983 + OLJFJH_05635 0.38 -1.2 1,148,221 + OLJFJH_05635 0.59 -1.0 1,148,648 + -1.0 1,148,649 - -1.2 1,148,898 + OLJFJH_05640 0.43 -1.0 1,148,901 - OLJFJH_05640 0.44 -0.6 1,149,070 - OLJFJH_05640 0.78 -0.0 1,149,203 + -0.0 1,149,308 + OLJFJH_05645 0.22 -0.3 1,149,345 - OLJFJH_05645 0.29 +0.7 1,149,424 + OLJFJH_05645 0.42 -0.3
Or see this region's nucleotide sequence