Experiment: FE-KB2-T1 (Control KB Rep 2 Time 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04985 and OLJFJH_04990 are separated by 97 nucleotides OLJFJH_04990 and OLJFJH_04995 are separated by 71 nucleotides OLJFJH_04995 and OLJFJH_05000 are separated by 73 nucleotides
OLJFJH_04985: OLJFJH_04985 - PTS mannitol transporter subunit IICBA, at 988,861 to 990,792
_04985
OLJFJH_04990: OLJFJH_04990 - mannitol-1-phosphate 5-dehydrogenase, at 990,890 to 992,038
_04990
OLJFJH_04995: OLJFJH_04995 - MltR family transcriptional regulator, at 992,110 to 992,655
_04995
OLJFJH_05000: OLJFJH_05000 - YibL family ribosome-associated protein, at 992,729 to 993,091
_05000
Position (kb) 990
991
992
993 Strain fitness (log2 ratio) -1
0
1
2 at 990.018 kb on - strand, within OLJFJH_04985 at 990.222 kb on + strand, within OLJFJH_04985 at 990.222 kb on + strand, within OLJFJH_04985 at 990.244 kb on + strand, within OLJFJH_04985 at 990.244 kb on + strand, within OLJFJH_04985 at 990.244 kb on + strand, within OLJFJH_04985 at 990.336 kb on + strand, within OLJFJH_04985 at 990.337 kb on - strand, within OLJFJH_04985 at 990.375 kb on - strand, within OLJFJH_04985 at 990.375 kb on - strand, within OLJFJH_04985 at 990.506 kb on - strand, within OLJFJH_04985 at 990.542 kb on + strand, within OLJFJH_04985 at 990.542 kb on + strand, within OLJFJH_04985 at 990.542 kb on + strand, within OLJFJH_04985 at 990.542 kb on + strand, within OLJFJH_04985 at 990.543 kb on - strand, within OLJFJH_04985 at 990.549 kb on + strand, within OLJFJH_04985 at 990.550 kb on - strand, within OLJFJH_04985 at 990.550 kb on - strand, within OLJFJH_04985 at 990.672 kb on + strand at 990.672 kb on + strand at 990.672 kb on + strand at 990.672 kb on + strand at 990.672 kb on + strand at 990.673 kb on - strand at 990.673 kb on - strand at 990.673 kb on - strand at 990.749 kb on + strand at 990.749 kb on + strand at 990.749 kb on + strand at 990.777 kb on + strand at 990.790 kb on + strand at 990.855 kb on + strand at 990.856 kb on - strand at 990.885 kb on + strand at 990.997 kb on - strand at 991.108 kb on + strand, within OLJFJH_04990 at 991.290 kb on + strand, within OLJFJH_04990 at 991.522 kb on + strand, within OLJFJH_04990 at 991.612 kb on + strand, within OLJFJH_04990 at 991.707 kb on - strand, within OLJFJH_04990 at 991.856 kb on - strand, within OLJFJH_04990 at 992.026 kb on + strand at 992.120 kb on + strand at 992.180 kb on + strand, within OLJFJH_04995 at 992.250 kb on - strand, within OLJFJH_04995 at 992.259 kb on - strand, within OLJFJH_04995 at 992.275 kb on + strand, within OLJFJH_04995 at 992.287 kb on + strand, within OLJFJH_04995 at 992.295 kb on - strand, within OLJFJH_04995 at 992.351 kb on + strand, within OLJFJH_04995 at 992.373 kb on + strand, within OLJFJH_04995 at 992.386 kb on + strand, within OLJFJH_04995 at 992.386 kb on + strand, within OLJFJH_04995 at 992.553 kb on + strand, within OLJFJH_04995 at 992.629 kb on - strand at 992.658 kb on + strand at 992.659 kb on - strand at 992.742 kb on + strand at 992.863 kb on - strand, within OLJFJH_05000
Per-strain Table
Position Strand Gene LocusTag Fraction FE-KB2-T1 (Control KB Rep 2 Time 1) remove 990,018 - OLJFJH_04985 0.60 +0.0 990,222 + OLJFJH_04985 0.70 -0.0 990,222 + OLJFJH_04985 0.70 -0.5 990,244 + OLJFJH_04985 0.72 +1.9 990,244 + OLJFJH_04985 0.72 -0.1 990,244 + OLJFJH_04985 0.72 +0.1 990,336 + OLJFJH_04985 0.76 -0.4 990,337 - OLJFJH_04985 0.76 +0.3 990,375 - OLJFJH_04985 0.78 -0.1 990,375 - OLJFJH_04985 0.78 -0.4 990,506 - OLJFJH_04985 0.85 +0.5 990,542 + OLJFJH_04985 0.87 -0.2 990,542 + OLJFJH_04985 0.87 +0.1 990,542 + OLJFJH_04985 0.87 +0.2 990,542 + OLJFJH_04985 0.87 -1.4 990,543 - OLJFJH_04985 0.87 -0.4 990,549 + OLJFJH_04985 0.87 +0.0 990,550 - OLJFJH_04985 0.87 +0.7 990,550 - OLJFJH_04985 0.87 -0.6 990,672 + +1.5 990,672 + -0.2 990,672 + +0.4 990,672 + -0.4 990,672 + +0.2 990,673 - -0.1 990,673 - -0.1 990,673 - +0.5 990,749 + -0.5 990,749 + +0.4 990,749 + -0.1 990,777 + +0.0 990,790 + +0.0 990,855 + -0.1 990,856 - -0.1 990,885 + -0.9 990,997 - -1.6 991,108 + OLJFJH_04990 0.19 -0.4 991,290 + OLJFJH_04990 0.35 -0.1 991,522 + OLJFJH_04990 0.55 -0.8 991,612 + OLJFJH_04990 0.63 +1.3 991,707 - OLJFJH_04990 0.71 +0.5 991,856 - OLJFJH_04990 0.84 -1.1 992,026 + +0.0 992,120 + -0.1 992,180 + OLJFJH_04995 0.13 -0.3 992,250 - OLJFJH_04995 0.26 -0.1 992,259 - OLJFJH_04995 0.27 -0.4 992,275 + OLJFJH_04995 0.30 -0.4 992,287 + OLJFJH_04995 0.32 +0.2 992,295 - OLJFJH_04995 0.34 +0.2 992,351 + OLJFJH_04995 0.44 +0.7 992,373 + OLJFJH_04995 0.48 +0.3 992,386 + OLJFJH_04995 0.51 +0.3 992,386 + OLJFJH_04995 0.51 -0.0 992,553 + OLJFJH_04995 0.81 -0.1 992,629 - -0.1 992,658 + -0.1 992,659 - -0.3 992,742 + -0.1 992,863 - OLJFJH_05000 0.37 +0.1
Or see this region's nucleotide sequence