Experiment: FE-KB2-T1 (Control KB Rep 2 Time 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04710 and OLJFJH_04715 are separated by 176 nucleotides OLJFJH_04715 and OLJFJH_04720 are separated by 123 nucleotides
OLJFJH_04710: OLJFJH_04710 - nucleoside hydrolase, at 920,719 to 921,630
_04710
OLJFJH_04715: OLJFJH_04715 - DUF1471 domain-containing protein, at 921,807 to 922,028
_04715
OLJFJH_04720: OLJFJH_04720 - peptidase, at 922,152 to 923,540
_04720
Position (kb) 921
922
923 Strain fitness (log2 ratio) -1
0
1 at 920.811 kb on + strand, within OLJFJH_04710 at 920.816 kb on + strand, within OLJFJH_04710 at 920.888 kb on + strand, within OLJFJH_04710 at 920.896 kb on + strand, within OLJFJH_04710 at 921.042 kb on + strand, within OLJFJH_04710 at 921.189 kb on + strand, within OLJFJH_04710 at 921.189 kb on + strand, within OLJFJH_04710 at 921.189 kb on + strand, within OLJFJH_04710 at 921.190 kb on - strand, within OLJFJH_04710 at 921.321 kb on - strand, within OLJFJH_04710 at 921.364 kb on + strand, within OLJFJH_04710 at 921.364 kb on + strand, within OLJFJH_04710 at 921.374 kb on - strand, within OLJFJH_04710 at 921.374 kb on - strand, within OLJFJH_04710 at 921.374 kb on - strand, within OLJFJH_04710 at 921.375 kb on + strand, within OLJFJH_04710 at 921.375 kb on + strand, within OLJFJH_04710 at 921.375 kb on + strand, within OLJFJH_04710 at 921.375 kb on + strand, within OLJFJH_04710 at 921.376 kb on - strand, within OLJFJH_04710 at 921.376 kb on - strand, within OLJFJH_04710 at 921.557 kb on + strand at 921.749 kb on + strand at 921.749 kb on + strand at 921.749 kb on + strand at 921.750 kb on - strand at 921.758 kb on - strand at 921.758 kb on - strand at 921.776 kb on + strand at 921.776 kb on + strand at 921.776 kb on + strand at 921.777 kb on - strand at 921.777 kb on - strand at 921.954 kb on + strand, within OLJFJH_04715 at 921.955 kb on - strand, within OLJFJH_04715 at 921.957 kb on - strand, within OLJFJH_04715 at 921.993 kb on - strand, within OLJFJH_04715 at 922.258 kb on + strand at 922.259 kb on - strand at 922.259 kb on - strand at 922.259 kb on - strand at 922.259 kb on - strand at 922.264 kb on + strand at 922.265 kb on - strand at 922.265 kb on - strand at 922.297 kb on + strand, within OLJFJH_04720 at 922.485 kb on - strand, within OLJFJH_04720 at 922.578 kb on + strand, within OLJFJH_04720 at 922.579 kb on - strand, within OLJFJH_04720 at 922.989 kb on - strand, within OLJFJH_04720 at 922.989 kb on - strand, within OLJFJH_04720 at 923.021 kb on + strand, within OLJFJH_04720 at 923.022 kb on - strand, within OLJFJH_04720 at 923.022 kb on - strand, within OLJFJH_04720 at 923.023 kb on + strand, within OLJFJH_04720 at 923.024 kb on - strand, within OLJFJH_04720 at 923.024 kb on - strand, within OLJFJH_04720
Per-strain Table
Position Strand Gene LocusTag Fraction FE-KB2-T1 (Control KB Rep 2 Time 1) remove 920,811 + OLJFJH_04710 0.10 -0.2 920,816 + OLJFJH_04710 0.11 -0.1 920,888 + OLJFJH_04710 0.19 -0.2 920,896 + OLJFJH_04710 0.19 -0.0 921,042 + OLJFJH_04710 0.35 -0.6 921,189 + OLJFJH_04710 0.52 -0.1 921,189 + OLJFJH_04710 0.52 +0.5 921,189 + OLJFJH_04710 0.52 -0.7 921,190 - OLJFJH_04710 0.52 -0.3 921,321 - OLJFJH_04710 0.66 +0.2 921,364 + OLJFJH_04710 0.71 -0.1 921,364 + OLJFJH_04710 0.71 -0.0 921,374 - OLJFJH_04710 0.72 -0.2 921,374 - OLJFJH_04710 0.72 +0.6 921,374 - OLJFJH_04710 0.72 +0.1 921,375 + OLJFJH_04710 0.72 +0.3 921,375 + OLJFJH_04710 0.72 -0.2 921,375 + OLJFJH_04710 0.72 +0.4 921,375 + OLJFJH_04710 0.72 -0.3 921,376 - OLJFJH_04710 0.72 -0.1 921,376 - OLJFJH_04710 0.72 -0.9 921,557 + +0.4 921,749 + -0.1 921,749 + -0.2 921,749 + -0.0 921,750 - -0.3 921,758 - +0.5 921,758 - -0.1 921,776 + +0.1 921,776 + +0.1 921,776 + -0.5 921,777 - -0.2 921,777 - -0.3 921,954 + OLJFJH_04715 0.66 -0.0 921,955 - OLJFJH_04715 0.67 -1.4 921,957 - OLJFJH_04715 0.68 +0.0 921,993 - OLJFJH_04715 0.84 -0.4 922,258 + +0.1 922,259 - +0.3 922,259 - +0.3 922,259 - +0.2 922,259 - -0.2 922,264 + +0.3 922,265 - -0.3 922,265 - +0.3 922,297 + OLJFJH_04720 0.10 +0.2 922,485 - OLJFJH_04720 0.24 -0.1 922,578 + OLJFJH_04720 0.31 +1.0 922,579 - OLJFJH_04720 0.31 +0.0 922,989 - OLJFJH_04720 0.60 -0.1 922,989 - OLJFJH_04720 0.60 +0.1 923,021 + OLJFJH_04720 0.63 -0.1 923,022 - OLJFJH_04720 0.63 -0.3 923,022 - OLJFJH_04720 0.63 +0.6 923,023 + OLJFJH_04720 0.63 -0.1 923,024 - OLJFJH_04720 0.63 -0.2 923,024 - OLJFJH_04720 0.63 -0.0
Or see this region's nucleotide sequence