Experiment: FE-KB2-T1 (Control KB Rep 2 Time 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04300 and OLJFJH_04305 are separated by 159 nucleotides OLJFJH_04305 and OLJFJH_04310 are separated by 72 nucleotides OLJFJH_04310 and OLJFJH_04315 overlap by 4 nucleotides
OLJFJH_04300: OLJFJH_04300 - gamma-glutamyltransferase, at 828,267 to 830,018
_04300
OLJFJH_04305: OLJFJH_04305 - DUF2756 domain-containing protein, at 830,178 to 830,465
_04305
OLJFJH_04310: OLJFJH_04310 - glycerophosphodiester phosphodiesterase, at 830,538 to 831,278
_04310
OLJFJH_04315: OLJFJH_04315 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 831,275 to 832,348
_04315
Position (kb) 830
831 Strain fitness (log2 ratio) -2
-1
0
1 at 829.184 kb on + strand, within OLJFJH_04300 at 829.191 kb on + strand, within OLJFJH_04300 at 829.202 kb on - strand, within OLJFJH_04300 at 829.282 kb on + strand, within OLJFJH_04300 at 829.283 kb on - strand, within OLJFJH_04300 at 829.283 kb on - strand, within OLJFJH_04300 at 829.283 kb on - strand, within OLJFJH_04300 at 829.428 kb on - strand, within OLJFJH_04300 at 829.432 kb on + strand, within OLJFJH_04300 at 829.531 kb on + strand, within OLJFJH_04300 at 829.640 kb on + strand, within OLJFJH_04300 at 829.640 kb on + strand, within OLJFJH_04300 at 829.640 kb on + strand, within OLJFJH_04300 at 829.640 kb on + strand, within OLJFJH_04300 at 829.692 kb on - strand, within OLJFJH_04300 at 829.718 kb on + strand, within OLJFJH_04300 at 829.718 kb on + strand, within OLJFJH_04300 at 829.929 kb on - strand at 830.034 kb on - strand at 830.046 kb on - strand at 830.070 kb on + strand at 830.071 kb on - strand at 830.077 kb on - strand at 830.144 kb on + strand at 830.145 kb on - strand at 830.156 kb on + strand at 830.381 kb on + strand, within OLJFJH_04305 at 830.556 kb on + strand at 830.557 kb on - strand at 830.567 kb on + strand at 830.567 kb on + strand at 830.567 kb on + strand at 830.627 kb on + strand, within OLJFJH_04310 at 830.720 kb on + strand, within OLJFJH_04310 at 830.720 kb on + strand, within OLJFJH_04310 at 831.210 kb on - strand at 831.448 kb on + strand, within OLJFJH_04315 at 831.449 kb on - strand, within OLJFJH_04315
Per-strain Table
Position Strand Gene LocusTag Fraction FE-KB2-T1 (Control KB Rep 2 Time 1) remove 829,184 + OLJFJH_04300 0.52 -0.1 829,191 + OLJFJH_04300 0.53 +1.1 829,202 - OLJFJH_04300 0.53 +0.7 829,282 + OLJFJH_04300 0.58 +0.0 829,283 - OLJFJH_04300 0.58 -0.0 829,283 - OLJFJH_04300 0.58 -1.8 829,283 - OLJFJH_04300 0.58 -0.7 829,428 - OLJFJH_04300 0.66 -0.3 829,432 + OLJFJH_04300 0.66 +0.1 829,531 + OLJFJH_04300 0.72 +0.4 829,640 + OLJFJH_04300 0.78 -0.4 829,640 + OLJFJH_04300 0.78 -0.0 829,640 + OLJFJH_04300 0.78 +0.2 829,640 + OLJFJH_04300 0.78 +0.2 829,692 - OLJFJH_04300 0.81 -0.3 829,718 + OLJFJH_04300 0.83 +0.7 829,718 + OLJFJH_04300 0.83 -0.5 829,929 - -0.1 830,034 - -0.4 830,046 - +0.1 830,070 + -0.2 830,071 - +0.4 830,077 - -0.1 830,144 + -0.1 830,145 - +0.1 830,156 + -0.2 830,381 + OLJFJH_04305 0.70 -0.4 830,556 + +0.0 830,557 - -0.3 830,567 + -0.7 830,567 + -0.7 830,567 + +0.1 830,627 + OLJFJH_04310 0.12 -0.2 830,720 + OLJFJH_04310 0.25 +1.1 830,720 + OLJFJH_04310 0.25 -0.3 831,210 - -0.4 831,448 + OLJFJH_04315 0.16 +0.2 831,449 - OLJFJH_04315 0.16 +0.1
Or see this region's nucleotide sequence