Experiment: FE-KB2-T1 (Control KB Rep 2 Time 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04225 and OLJFJH_04230 are separated by 128 nucleotides OLJFJH_04230 and OLJFJH_04235 are separated by 367 nucleotides OLJFJH_04235 and OLJFJH_04240 are separated by 172 nucleotides
OLJFJH_04225: OLJFJH_04225 - glycerol-3-phosphate dehydrogenase, at 808,717 to 810,222
_04225
OLJFJH_04230: OLJFJH_04230 - hypothetical protein, at 810,351 to 810,797
_04230
OLJFJH_04235: OLJFJH_04235 - hypothetical protein, at 811,165 to 812,052
_04235
OLJFJH_04240: OLJFJH_04240 - glycogen phosphorylase, at 812,225 to 814,672
_04240
Position (kb) 811
812
813 Strain fitness (log2 ratio) -1
0
1 at 810.262 kb on - strand at 810.264 kb on + strand at 810.264 kb on + strand at 810.327 kb on - strand at 810.432 kb on - strand, within OLJFJH_04230 at 810.434 kb on + strand, within OLJFJH_04230 at 810.435 kb on - strand, within OLJFJH_04230 at 810.522 kb on + strand, within OLJFJH_04230 at 810.522 kb on + strand, within OLJFJH_04230 at 810.523 kb on - strand, within OLJFJH_04230 at 810.735 kb on - strand, within OLJFJH_04230 at 810.901 kb on + strand at 810.902 kb on - strand at 811.059 kb on + strand at 811.139 kb on + strand at 811.161 kb on - strand at 811.166 kb on + strand at 811.500 kb on + strand, within OLJFJH_04235 at 811.525 kb on - strand, within OLJFJH_04235 at 811.615 kb on - strand, within OLJFJH_04235 at 812.125 kb on - strand at 812.311 kb on + strand at 812.314 kb on + strand at 812.314 kb on + strand at 812.314 kb on + strand at 812.315 kb on - strand at 812.385 kb on + strand at 812.386 kb on - strand at 812.447 kb on - strand at 812.447 kb on - strand at 812.447 kb on - strand at 812.533 kb on - strand, within OLJFJH_04240 at 812.536 kb on - strand, within OLJFJH_04240 at 812.588 kb on - strand, within OLJFJH_04240 at 812.605 kb on + strand, within OLJFJH_04240 at 812.606 kb on - strand, within OLJFJH_04240 at 812.606 kb on - strand, within OLJFJH_04240 at 812.656 kb on + strand, within OLJFJH_04240 at 812.657 kb on - strand, within OLJFJH_04240 at 812.695 kb on + strand, within OLJFJH_04240 at 812.784 kb on + strand, within OLJFJH_04240 at 812.784 kb on + strand, within OLJFJH_04240 at 812.785 kb on - strand, within OLJFJH_04240 at 812.785 kb on - strand, within OLJFJH_04240 at 812.836 kb on + strand, within OLJFJH_04240 at 812.872 kb on + strand, within OLJFJH_04240 at 812.884 kb on + strand, within OLJFJH_04240 at 812.886 kb on + strand, within OLJFJH_04240 at 812.886 kb on + strand, within OLJFJH_04240 at 812.886 kb on + strand, within OLJFJH_04240 at 812.886 kb on + strand, within OLJFJH_04240 at 812.887 kb on - strand, within OLJFJH_04240 at 812.887 kb on - strand, within OLJFJH_04240 at 812.889 kb on + strand, within OLJFJH_04240 at 812.889 kb on + strand, within OLJFJH_04240 at 812.889 kb on + strand, within OLJFJH_04240 at 812.889 kb on + strand, within OLJFJH_04240 at 812.889 kb on + strand, within OLJFJH_04240 at 812.993 kb on - strand, within OLJFJH_04240 at 813.008 kb on - strand, within OLJFJH_04240 at 813.009 kb on + strand, within OLJFJH_04240 at 813.009 kb on + strand, within OLJFJH_04240 at 813.019 kb on + strand, within OLJFJH_04240
Per-strain Table
Position Strand Gene LocusTag Fraction FE-KB2-T1 (Control KB Rep 2 Time 1) remove 810,262 - -0.0 810,264 + +0.5 810,264 + +0.1 810,327 - +0.9 810,432 - OLJFJH_04230 0.18 -0.0 810,434 + OLJFJH_04230 0.19 -0.2 810,435 - OLJFJH_04230 0.19 +0.3 810,522 + OLJFJH_04230 0.38 +0.1 810,522 + OLJFJH_04230 0.38 -0.6 810,523 - OLJFJH_04230 0.38 -0.2 810,735 - OLJFJH_04230 0.86 +0.2 810,901 + -0.1 810,902 - -0.9 811,059 + -0.1 811,139 + -0.2 811,161 - -0.5 811,166 + +0.6 811,500 + OLJFJH_04235 0.38 -0.2 811,525 - OLJFJH_04235 0.41 -0.7 811,615 - OLJFJH_04235 0.51 -0.5 812,125 - +0.1 812,311 + -0.5 812,314 + -0.1 812,314 + -0.0 812,314 + -0.1 812,315 - -0.2 812,385 + +0.1 812,386 - -1.7 812,447 - -0.1 812,447 - -0.4 812,447 - +0.2 812,533 - OLJFJH_04240 0.13 -0.1 812,536 - OLJFJH_04240 0.13 +1.2 812,588 - OLJFJH_04240 0.15 -0.1 812,605 + OLJFJH_04240 0.16 -0.4 812,606 - OLJFJH_04240 0.16 +0.3 812,606 - OLJFJH_04240 0.16 +0.3 812,656 + OLJFJH_04240 0.18 -0.4 812,657 - OLJFJH_04240 0.18 -0.1 812,695 + OLJFJH_04240 0.19 -1.1 812,784 + OLJFJH_04240 0.23 -0.5 812,784 + OLJFJH_04240 0.23 +0.2 812,785 - OLJFJH_04240 0.23 +0.3 812,785 - OLJFJH_04240 0.23 +0.2 812,836 + OLJFJH_04240 0.25 -0.1 812,872 + OLJFJH_04240 0.26 +0.2 812,884 + OLJFJH_04240 0.27 -0.2 812,886 + OLJFJH_04240 0.27 +0.3 812,886 + OLJFJH_04240 0.27 -0.2 812,886 + OLJFJH_04240 0.27 -0.6 812,886 + OLJFJH_04240 0.27 -0.1 812,887 - OLJFJH_04240 0.27 -0.2 812,887 - OLJFJH_04240 0.27 -0.1 812,889 + OLJFJH_04240 0.27 -0.1 812,889 + OLJFJH_04240 0.27 -0.5 812,889 + OLJFJH_04240 0.27 -0.5 812,889 + OLJFJH_04240 0.27 +1.2 812,889 + OLJFJH_04240 0.27 +0.1 812,993 - OLJFJH_04240 0.31 -0.3 813,008 - OLJFJH_04240 0.32 -0.2 813,009 + OLJFJH_04240 0.32 +0.0 813,009 + OLJFJH_04240 0.32 +0.1 813,019 + OLJFJH_04240 0.32 -0.4
Or see this region's nucleotide sequence