Experiment: FE-KB2-T1 (Control KB Rep 2 Time 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_02040 and OLJFJH_02045 are separated by 122 nucleotides OLJFJH_02045 and OLJFJH_02050 are separated by 85 nucleotides
OLJFJH_02040: OLJFJH_02040 - phospholipase D family protein, at 361,077 to 361,601
_02040
OLJFJH_02045: OLJFJH_02045 - hypothetical protein, at 361,724 to 361,906
_02045
OLJFJH_02050: OLJFJH_02050 - hypothetical protein, at 361,992 to 362,189
_02050
Position (kb) 361
362 Strain fitness (log2 ratio) -1
0
1
2 at 360.736 kb on - strand at 360.736 kb on - strand at 360.786 kb on + strand at 360.787 kb on - strand at 360.787 kb on - strand at 360.859 kb on + strand at 360.860 kb on - strand at 360.860 kb on - strand at 360.860 kb on - strand at 360.956 kb on + strand at 361.012 kb on + strand at 361.242 kb on + strand, within OLJFJH_02040 at 361.242 kb on + strand, within OLJFJH_02040 at 361.340 kb on + strand, within OLJFJH_02040 at 361.341 kb on - strand, within OLJFJH_02040 at 361.344 kb on + strand, within OLJFJH_02040 at 361.344 kb on + strand, within OLJFJH_02040 at 361.345 kb on - strand, within OLJFJH_02040 at 361.345 kb on - strand, within OLJFJH_02040 at 361.345 kb on - strand, within OLJFJH_02040 at 361.401 kb on + strand, within OLJFJH_02040 at 361.401 kb on + strand, within OLJFJH_02040 at 361.402 kb on - strand, within OLJFJH_02040 at 361.402 kb on - strand, within OLJFJH_02040 at 361.418 kb on + strand, within OLJFJH_02040 at 361.419 kb on - strand, within OLJFJH_02040 at 361.442 kb on + strand, within OLJFJH_02040 at 361.443 kb on - strand, within OLJFJH_02040 at 361.467 kb on + strand, within OLJFJH_02040 at 361.467 kb on + strand, within OLJFJH_02040 at 361.542 kb on + strand, within OLJFJH_02040 at 361.784 kb on + strand, within OLJFJH_02045 at 361.851 kb on - strand, within OLJFJH_02045 at 361.895 kb on + strand at 361.937 kb on + strand at 361.938 kb on - strand at 362.278 kb on - strand at 362.318 kb on + strand at 362.319 kb on - strand at 362.319 kb on - strand at 362.332 kb on + strand at 362.333 kb on - strand at 362.338 kb on - strand at 362.384 kb on - strand at 362.418 kb on - strand at 362.463 kb on + strand at 362.474 kb on + strand at 362.475 kb on - strand at 362.475 kb on - strand at 362.786 kb on + strand at 362.786 kb on + strand at 362.786 kb on + strand at 362.786 kb on + strand at 362.786 kb on + strand at 362.786 kb on + strand at 362.786 kb on + strand at 362.787 kb on - strand at 362.787 kb on - strand at 362.873 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction FE-KB2-T1 (Control KB Rep 2 Time 1) remove 360,736 - -0.8 360,736 - +1.8 360,786 + +0.2 360,787 - +0.2 360,787 - +0.4 360,859 + +0.1 360,860 - +0.1 360,860 - -0.3 360,860 - +0.2 360,956 + +0.1 361,012 + +0.1 361,242 + OLJFJH_02040 0.31 -0.3 361,242 + OLJFJH_02040 0.31 -0.1 361,340 + OLJFJH_02040 0.50 -0.0 361,341 - OLJFJH_02040 0.50 +0.1 361,344 + OLJFJH_02040 0.51 -0.5 361,344 + OLJFJH_02040 0.51 +0.2 361,345 - OLJFJH_02040 0.51 +0.8 361,345 - OLJFJH_02040 0.51 -0.0 361,345 - OLJFJH_02040 0.51 -0.3 361,401 + OLJFJH_02040 0.62 -0.0 361,401 + OLJFJH_02040 0.62 +0.1 361,402 - OLJFJH_02040 0.62 -0.1 361,402 - OLJFJH_02040 0.62 +0.4 361,418 + OLJFJH_02040 0.65 +0.0 361,419 - OLJFJH_02040 0.65 +1.4 361,442 + OLJFJH_02040 0.70 +0.4 361,443 - OLJFJH_02040 0.70 -0.1 361,467 + OLJFJH_02040 0.74 -0.0 361,467 + OLJFJH_02040 0.74 -0.1 361,542 + OLJFJH_02040 0.89 -0.1 361,784 + OLJFJH_02045 0.33 -0.5 361,851 - OLJFJH_02045 0.69 -0.6 361,895 + +0.1 361,937 + -0.1 361,938 - +0.1 362,278 - -0.5 362,318 + -1.2 362,319 - -0.1 362,319 - -0.1 362,332 + +0.1 362,333 - -0.4 362,338 - -0.3 362,384 - -0.9 362,418 - +0.5 362,463 + +1.5 362,474 + +0.2 362,475 - +0.1 362,475 - -0.8 362,786 + +0.1 362,786 + -0.3 362,786 + -1.3 362,786 + +0.5 362,786 + +0.3 362,786 + +0.1 362,786 + +0.3 362,787 - -0.0 362,787 - -0.4 362,873 + -0.2
Or see this region's nucleotide sequence