Experiment: FE-KB2-T1 (Control KB Rep 2 Time 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_01955 and OLJFJH_01960 are separated by 218 nucleotides OLJFJH_01960 and OLJFJH_01965 are separated by 76 nucleotides
OLJFJH_01955: OLJFJH_01955 - Putative metabolite transport protein, at 345,528 to 345,971
_01955
OLJFJH_01960: OLJFJH_01960 - DUF2946 domain-containing protein, at 346,190 to 346,636
_01960
OLJFJH_01965: OLJFJH_01965 - PepSY-associated TM region, at 346,713 to 348,113
_01965
Position (kb) 346
347 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 345.191 kb on - strand at 345.191 kb on - strand at 345.497 kb on + strand at 345.498 kb on - strand at 345.531 kb on + strand at 345.532 kb on - strand at 345.808 kb on + strand, within OLJFJH_01955 at 345.815 kb on - strand, within OLJFJH_01955 at 345.815 kb on - strand, within OLJFJH_01955 at 345.815 kb on - strand, within OLJFJH_01955 at 345.886 kb on - strand, within OLJFJH_01955 at 346.087 kb on + strand at 346.088 kb on - strand at 346.107 kb on + strand at 346.123 kb on + strand at 346.133 kb on + strand at 346.134 kb on - strand at 346.171 kb on - strand at 346.367 kb on - strand, within OLJFJH_01960 at 346.515 kb on + strand, within OLJFJH_01960 at 346.515 kb on + strand, within OLJFJH_01960 at 346.515 kb on + strand, within OLJFJH_01960 at 346.646 kb on + strand at 346.646 kb on + strand at 346.647 kb on - strand at 346.681 kb on + strand at 346.681 kb on + strand at 346.682 kb on - strand at 346.712 kb on + strand at 346.713 kb on - strand at 346.713 kb on - strand at 346.713 kb on - strand at 346.854 kb on + strand, within OLJFJH_01965 at 346.854 kb on + strand, within OLJFJH_01965 at 346.855 kb on - strand, within OLJFJH_01965 at 346.855 kb on - strand, within OLJFJH_01965 at 347.137 kb on + strand, within OLJFJH_01965 at 347.137 kb on + strand, within OLJFJH_01965 at 347.137 kb on + strand, within OLJFJH_01965 at 347.138 kb on - strand, within OLJFJH_01965 at 347.138 kb on - strand, within OLJFJH_01965 at 347.138 kb on - strand, within OLJFJH_01965 at 347.140 kb on + strand, within OLJFJH_01965 at 347.205 kb on + strand, within OLJFJH_01965 at 347.206 kb on - strand, within OLJFJH_01965 at 347.206 kb on - strand, within OLJFJH_01965 at 347.206 kb on - strand, within OLJFJH_01965 at 347.430 kb on - strand, within OLJFJH_01965 at 347.554 kb on + strand, within OLJFJH_01965 at 347.555 kb on - strand, within OLJFJH_01965
Per-strain Table
Position Strand Gene LocusTag Fraction FE-KB2-T1 (Control KB Rep 2 Time 1) remove 345,191 - -0.3 345,191 - -0.1 345,497 + +0.1 345,498 - +0.2 345,531 + +0.2 345,532 - +0.1 345,808 + OLJFJH_01955 0.63 -0.2 345,815 - OLJFJH_01955 0.65 -0.6 345,815 - OLJFJH_01955 0.65 +0.2 345,815 - OLJFJH_01955 0.65 -0.5 345,886 - OLJFJH_01955 0.81 +0.8 346,087 + -0.5 346,088 - +0.1 346,107 + +0.0 346,123 + +0.7 346,133 + +0.2 346,134 - -0.6 346,171 - -1.0 346,367 - OLJFJH_01960 0.40 -1.5 346,515 + OLJFJH_01960 0.73 -0.3 346,515 + OLJFJH_01960 0.73 -0.1 346,515 + OLJFJH_01960 0.73 -0.2 346,646 + +0.5 346,646 + -0.3 346,647 - -1.0 346,681 + +0.3 346,681 + -0.2 346,682 - -1.5 346,712 + -0.3 346,713 - -0.8 346,713 - -0.4 346,713 - +0.3 346,854 + OLJFJH_01965 0.10 -1.0 346,854 + OLJFJH_01965 0.10 -1.0 346,855 - OLJFJH_01965 0.10 -0.5 346,855 - OLJFJH_01965 0.10 +0.1 347,137 + OLJFJH_01965 0.30 -0.2 347,137 + OLJFJH_01965 0.30 -1.0 347,137 + OLJFJH_01965 0.30 -0.6 347,138 - OLJFJH_01965 0.30 +1.4 347,138 - OLJFJH_01965 0.30 +0.3 347,138 - OLJFJH_01965 0.30 -0.2 347,140 + OLJFJH_01965 0.30 +0.1 347,205 + OLJFJH_01965 0.35 -1.1 347,206 - OLJFJH_01965 0.35 -1.5 347,206 - OLJFJH_01965 0.35 -0.8 347,206 - OLJFJH_01965 0.35 -0.2 347,430 - OLJFJH_01965 0.51 -2.8 347,554 + OLJFJH_01965 0.60 -0.3 347,555 - OLJFJH_01965 0.60 -1.4
Or see this region's nucleotide sequence