Experiment: FE-KB2-T1 (Control KB Rep 2 Time 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_01700 and OLJFJH_01705 are separated by 5 nucleotides OLJFJH_01705 and OLJFJH_01710 are separated by 316 nucleotides OLJFJH_01710 and OLJFJH_01715 are separated by 3 nucleotides
OLJFJH_01700: OLJFJH_01700 - hypothetical protein, at 290,494 to 290,700
_01700
OLJFJH_01705: OLJFJH_01705 - hypothetical protein, at 290,706 to 291,089
_01705
OLJFJH_01710: OLJFJH_01710 - hypothetical protein, at 291,406 to 291,885
_01710
OLJFJH_01715: OLJFJH_01715 - RHS domain-containing protein, at 291,889 to 293,946
_01715
Position (kb) 291
292 Strain fitness (log2 ratio) -1
0
1 at 290.512 kb on + strand at 291.065 kb on + strand at 291.746 kb on + strand, within OLJFJH_01710 at 291.810 kb on + strand, within OLJFJH_01710 at 291.938 kb on + strand at 292.051 kb on + strand at 292.282 kb on - strand, within OLJFJH_01715 at 292.282 kb on - strand, within OLJFJH_01715 at 292.299 kb on + strand, within OLJFJH_01715 at 292.300 kb on - strand, within OLJFJH_01715 at 292.300 kb on - strand, within OLJFJH_01715 at 292.358 kb on + strand, within OLJFJH_01715 at 292.359 kb on - strand, within OLJFJH_01715 at 292.364 kb on + strand, within OLJFJH_01715 at 292.364 kb on + strand, within OLJFJH_01715 at 292.369 kb on - strand, within OLJFJH_01715 at 292.369 kb on - strand, within OLJFJH_01715
Per-strain Table
Position Strand Gene LocusTag Fraction FE-KB2-T1 (Control KB Rep 2 Time 1) remove 290,512 + -0.2 291,065 + +0.2 291,746 + OLJFJH_01710 0.71 -0.2 291,810 + OLJFJH_01710 0.84 -0.5 291,938 + -0.6 292,051 + +0.2 292,282 - OLJFJH_01715 0.19 -0.3 292,282 - OLJFJH_01715 0.19 -0.2 292,299 + OLJFJH_01715 0.20 +0.5 292,300 - OLJFJH_01715 0.20 +0.0 292,300 - OLJFJH_01715 0.20 -0.1 292,358 + OLJFJH_01715 0.23 +0.6 292,359 - OLJFJH_01715 0.23 +0.6 292,364 + OLJFJH_01715 0.23 -0.1 292,364 + OLJFJH_01715 0.23 +0.0 292,369 - OLJFJH_01715 0.23 -0.5 292,369 - OLJFJH_01715 0.23 -0.1
Or see this region's nucleotide sequence