Experiment: FE-KB2-T1 (Control KB Rep 2 Time 1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_00770 and OLJFJH_00775 are separated by 133 nucleotides OLJFJH_00775 and OLJFJH_00780 overlap by 4 nucleotides OLJFJH_00780 and OLJFJH_00785 are separated by 77 nucleotides
OLJFJH_00770: OLJFJH_00770 - tRNA glutamyl-Q(34) synthetase GluQRS, at 73,951 to 74,859
_00770
OLJFJH_00775: OLJFJH_00775 - polynucleotide adenylyltransferase PcnB, at 74,993 to 76,342
_00775
OLJFJH_00780: OLJFJH_00780 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase, at 76,339 to 76,821
_00780
OLJFJH_00785: OLJFJH_00785 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 76,899 to 77,693
_00785
Position (kb) 74
75
76
77 Strain fitness (log2 ratio) -1
0
1 at 74.035 kb on + strand at 74.036 kb on - strand at 74.036 kb on - strand at 74.036 kb on - strand at 74.085 kb on + strand, within OLJFJH_00770 at 74.086 kb on - strand, within OLJFJH_00770 at 74.086 kb on - strand, within OLJFJH_00770 at 74.201 kb on - strand, within OLJFJH_00770 at 74.242 kb on + strand, within OLJFJH_00770 at 74.243 kb on - strand, within OLJFJH_00770 at 74.250 kb on + strand, within OLJFJH_00770 at 74.290 kb on + strand, within OLJFJH_00770 at 74.352 kb on - strand, within OLJFJH_00770 at 74.352 kb on - strand, within OLJFJH_00770 at 74.355 kb on + strand, within OLJFJH_00770 at 74.355 kb on + strand, within OLJFJH_00770 at 74.355 kb on + strand, within OLJFJH_00770 at 74.364 kb on - strand, within OLJFJH_00770 at 74.462 kb on - strand, within OLJFJH_00770 at 74.594 kb on + strand, within OLJFJH_00770 at 74.594 kb on + strand, within OLJFJH_00770 at 74.595 kb on - strand, within OLJFJH_00770 at 74.628 kb on + strand, within OLJFJH_00770 at 74.629 kb on - strand, within OLJFJH_00770 at 74.759 kb on + strand, within OLJFJH_00770 at 74.760 kb on - strand, within OLJFJH_00770 at 74.790 kb on + strand at 74.790 kb on + strand at 74.793 kb on + strand at 74.793 kb on + strand at 74.794 kb on - strand at 74.794 kb on - strand at 74.823 kb on + strand at 74.823 kb on + strand at 74.824 kb on - strand at 74.824 kb on - strand at 74.863 kb on - strand at 74.888 kb on + strand at 75.196 kb on + strand, within OLJFJH_00775 at 75.431 kb on + strand, within OLJFJH_00775 at 75.431 kb on + strand, within OLJFJH_00775 at 75.431 kb on + strand, within OLJFJH_00775 at 75.709 kb on + strand, within OLJFJH_00775 at 75.709 kb on + strand, within OLJFJH_00775 at 75.709 kb on + strand, within OLJFJH_00775 at 75.709 kb on + strand, within OLJFJH_00775 at 75.709 kb on + strand, within OLJFJH_00775 at 75.718 kb on + strand, within OLJFJH_00775 at 75.731 kb on + strand, within OLJFJH_00775 at 75.793 kb on + strand, within OLJFJH_00775 at 75.793 kb on + strand, within OLJFJH_00775 at 75.947 kb on + strand, within OLJFJH_00775 at 75.947 kb on + strand, within OLJFJH_00775 at 75.950 kb on + strand, within OLJFJH_00775 at 76.021 kb on + strand, within OLJFJH_00775 at 76.021 kb on + strand, within OLJFJH_00775 at 76.111 kb on + strand, within OLJFJH_00775 at 76.111 kb on + strand, within OLJFJH_00775 at 76.800 kb on + strand at 76.819 kb on + strand at 76.862 kb on + strand at 76.896 kb on - strand at 76.949 kb on + strand at 76.950 kb on - strand at 77.051 kb on - strand, within OLJFJH_00785 at 77.097 kb on + strand, within OLJFJH_00785 at 77.098 kb on - strand, within OLJFJH_00785 at 77.160 kb on - strand, within OLJFJH_00785 at 77.160 kb on - strand, within OLJFJH_00785 at 77.167 kb on - strand, within OLJFJH_00785 at 77.167 kb on - strand, within OLJFJH_00785
Per-strain Table
Position Strand Gene LocusTag Fraction FE-KB2-T1 (Control KB Rep 2 Time 1) remove 74,035 + -0.3 74,036 - -1.4 74,036 - +0.2 74,036 - +0.5 74,085 + OLJFJH_00770 0.15 -0.2 74,086 - OLJFJH_00770 0.15 +0.8 74,086 - OLJFJH_00770 0.15 -0.1 74,201 - OLJFJH_00770 0.28 -0.2 74,242 + OLJFJH_00770 0.32 -1.2 74,243 - OLJFJH_00770 0.32 +0.2 74,250 + OLJFJH_00770 0.33 -0.6 74,290 + OLJFJH_00770 0.37 -0.8 74,352 - OLJFJH_00770 0.44 -0.4 74,352 - OLJFJH_00770 0.44 +0.2 74,355 + OLJFJH_00770 0.44 +0.0 74,355 + OLJFJH_00770 0.44 +0.2 74,355 + OLJFJH_00770 0.44 -0.0 74,364 - OLJFJH_00770 0.45 +0.3 74,462 - OLJFJH_00770 0.56 +0.3 74,594 + OLJFJH_00770 0.71 -1.5 74,594 + OLJFJH_00770 0.71 -0.9 74,595 - OLJFJH_00770 0.71 +0.2 74,628 + OLJFJH_00770 0.74 +0.4 74,629 - OLJFJH_00770 0.75 -0.1 74,759 + OLJFJH_00770 0.89 +0.4 74,760 - OLJFJH_00770 0.89 +0.3 74,790 + -1.0 74,790 + -0.3 74,793 + -0.0 74,793 + -0.3 74,794 - +0.1 74,794 - -0.2 74,823 + +0.1 74,823 + -0.3 74,824 - +0.4 74,824 - +0.0 74,863 - -0.0 74,888 + -0.3 75,196 + OLJFJH_00775 0.15 -0.5 75,431 + OLJFJH_00775 0.32 -0.4 75,431 + OLJFJH_00775 0.32 -1.4 75,431 + OLJFJH_00775 0.32 -0.5 75,709 + OLJFJH_00775 0.53 -0.4 75,709 + OLJFJH_00775 0.53 +0.1 75,709 + OLJFJH_00775 0.53 -1.1 75,709 + OLJFJH_00775 0.53 -1.0 75,709 + OLJFJH_00775 0.53 -0.6 75,718 + OLJFJH_00775 0.54 -0.4 75,731 + OLJFJH_00775 0.55 -0.2 75,793 + OLJFJH_00775 0.59 -0.0 75,793 + OLJFJH_00775 0.59 -0.5 75,947 + OLJFJH_00775 0.71 -0.4 75,947 + OLJFJH_00775 0.71 -0.6 75,950 + OLJFJH_00775 0.71 -1.4 76,021 + OLJFJH_00775 0.76 +1.2 76,021 + OLJFJH_00775 0.76 -0.5 76,111 + OLJFJH_00775 0.83 -0.4 76,111 + OLJFJH_00775 0.83 -0.7 76,800 + -0.2 76,819 + +0.5 76,862 + +0.3 76,896 - +0.3 76,949 + -0.1 76,950 - +0.3 77,051 - OLJFJH_00785 0.19 +0.6 77,097 + OLJFJH_00785 0.25 +0.2 77,098 - OLJFJH_00785 0.25 +0.5 77,160 - OLJFJH_00785 0.33 -0.2 77,160 - OLJFJH_00785 0.33 -0.0 77,167 - OLJFJH_00785 0.34 -0.2 77,167 - OLJFJH_00785 0.34 -0.2
Or see this region's nucleotide sequence