Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF923 and GFF924 are separated by 23 nucleotides GFF924 and GFF925 are separated by 72 nucleotides
GFF923 - Release factor glutamine methyltransferase, at 159,346 to 160,473
GFF923
GFF924 - Beta-hexosaminidase, at 160,497 to 161,543
GFF924
GFF925 - hypothetical protein, at 161,616 to 162,515
GFF925
Position (kb) 160
161
162 Strain fitness (log2 ratio) -2
-1
0
1 at 159.500 kb on + strand, within GFF923 at 159.500 kb on + strand, within GFF923 at 159.500 kb on + strand, within GFF923 at 159.500 kb on + strand, within GFF923 at 159.500 kb on + strand, within GFF923 at 159.500 kb on + strand, within GFF923 at 159.500 kb on + strand, within GFF923 at 159.500 kb on + strand, within GFF923 at 159.501 kb on - strand, within GFF923 at 159.501 kb on - strand, within GFF923 at 159.501 kb on - strand, within GFF923 at 159.501 kb on - strand, within GFF923 at 159.502 kb on + strand, within GFF923 at 159.546 kb on + strand, within GFF923 at 159.640 kb on - strand, within GFF923 at 159.648 kb on + strand, within GFF923 at 159.648 kb on + strand, within GFF923 at 159.648 kb on + strand, within GFF923 at 159.648 kb on + strand, within GFF923 at 159.649 kb on - strand, within GFF923 at 159.649 kb on - strand, within GFF923 at 159.649 kb on - strand, within GFF923 at 159.653 kb on + strand, within GFF923 at 159.656 kb on + strand, within GFF923 at 159.666 kb on + strand, within GFF923 at 159.667 kb on - strand, within GFF923 at 159.667 kb on - strand, within GFF923 at 159.667 kb on - strand, within GFF923 at 159.670 kb on + strand, within GFF923 at 159.670 kb on + strand, within GFF923 at 159.670 kb on + strand, within GFF923 at 159.670 kb on + strand, within GFF923 at 159.671 kb on - strand, within GFF923 at 159.671 kb on - strand, within GFF923 at 159.671 kb on - strand, within GFF923 at 159.792 kb on - strand, within GFF923 at 159.792 kb on - strand, within GFF923 at 159.855 kb on + strand, within GFF923 at 159.855 kb on + strand, within GFF923 at 159.855 kb on + strand, within GFF923 at 159.855 kb on + strand, within GFF923 at 159.856 kb on - strand, within GFF923 at 159.856 kb on - strand, within GFF923 at 159.857 kb on + strand, within GFF923 at 159.857 kb on + strand, within GFF923 at 159.857 kb on + strand, within GFF923 at 159.857 kb on + strand, within GFF923 at 159.857 kb on + strand, within GFF923 at 159.857 kb on + strand, within GFF923 at 159.857 kb on + strand, within GFF923 at 159.857 kb on + strand, within GFF923 at 159.857 kb on + strand, within GFF923 at 159.857 kb on + strand, within GFF923 at 159.857 kb on + strand, within GFF923 at 159.858 kb on - strand, within GFF923 at 159.858 kb on - strand, within GFF923 at 159.858 kb on - strand, within GFF923 at 159.858 kb on - strand, within GFF923 at 159.858 kb on - strand, within GFF923 at 159.858 kb on - strand, within GFF923 at 159.858 kb on - strand, within GFF923 at 159.858 kb on - strand, within GFF923 at 159.858 kb on - strand, within GFF923 at 159.858 kb on - strand, within GFF923 at 159.858 kb on - strand, within GFF923 at 159.868 kb on + strand, within GFF923 at 159.877 kb on + strand, within GFF923 at 159.877 kb on + strand, within GFF923 at 159.878 kb on - strand, within GFF923 at 159.878 kb on - strand, within GFF923 at 159.898 kb on + strand, within GFF923 at 159.898 kb on + strand, within GFF923 at 159.927 kb on + strand, within GFF923 at 159.927 kb on + strand, within GFF923 at 159.928 kb on - strand, within GFF923 at 159.930 kb on + strand, within GFF923 at 159.986 kb on + strand, within GFF923 at 160.086 kb on + strand, within GFF923 at 160.086 kb on + strand, within GFF923 at 160.086 kb on + strand, within GFF923 at 160.086 kb on + strand, within GFF923 at 160.143 kb on + strand, within GFF923 at 160.144 kb on - strand, within GFF923 at 160.195 kb on + strand, within GFF923 at 160.195 kb on + strand, within GFF923 at 160.195 kb on + strand, within GFF923 at 160.196 kb on - strand, within GFF923 at 160.196 kb on - strand, within GFF923 at 160.229 kb on + strand, within GFF923 at 160.229 kb on + strand, within GFF923 at 160.229 kb on + strand, within GFF923 at 160.250 kb on + strand, within GFF923 at 160.250 kb on + strand, within GFF923 at 160.250 kb on + strand, within GFF923 at 160.250 kb on + strand, within GFF923 at 160.251 kb on - strand, within GFF923 at 160.277 kb on + strand, within GFF923 at 160.284 kb on + strand, within GFF923 at 160.284 kb on + strand, within GFF923 at 160.284 kb on + strand, within GFF923 at 160.329 kb on + strand, within GFF923 at 160.329 kb on + strand, within GFF923 at 160.329 kb on + strand, within GFF923 at 160.329 kb on + strand, within GFF923 at 160.329 kb on + strand, within GFF923 at 160.329 kb on + strand, within GFF923 at 160.329 kb on + strand, within GFF923 at 160.329 kb on + strand, within GFF923 at 160.329 kb on + strand, within GFF923 at 160.330 kb on - strand, within GFF923 at 160.330 kb on - strand, within GFF923 at 160.330 kb on - strand, within GFF923 at 160.418 kb on + strand at 160.419 kb on - strand at 160.420 kb on + strand at 160.420 kb on + strand at 160.420 kb on + strand at 160.421 kb on - strand at 160.421 kb on - strand at 160.421 kb on - strand at 160.421 kb on - strand at 160.421 kb on - strand at 160.421 kb on - strand at 160.421 kb on - strand at 160.421 kb on - strand at 160.421 kb on - strand at 160.421 kb on - strand at 160.421 kb on - strand at 160.442 kb on + strand at 160.442 kb on + strand at 160.443 kb on - strand at 160.443 kb on - strand at 160.460 kb on + strand at 160.485 kb on + strand at 160.485 kb on + strand at 160.496 kb on + strand at 160.497 kb on - strand at 160.504 kb on + strand at 160.504 kb on + strand at 160.505 kb on - strand at 160.646 kb on + strand, within GFF924 at 160.648 kb on + strand, within GFF924 at 160.648 kb on + strand, within GFF924 at 160.648 kb on + strand, within GFF924 at 160.648 kb on + strand, within GFF924 at 160.760 kb on + strand, within GFF924 at 160.761 kb on - strand, within GFF924 at 160.859 kb on + strand, within GFF924 at 160.881 kb on + strand, within GFF924 at 160.881 kb on + strand, within GFF924 at 160.882 kb on - strand, within GFF924 at 160.971 kb on - strand, within GFF924 at 161.090 kb on + strand, within GFF924 at 161.113 kb on + strand, within GFF924 at 161.114 kb on - strand, within GFF924 at 161.155 kb on - strand, within GFF924 at 161.341 kb on + strand, within GFF924 at 161.341 kb on + strand, within GFF924 at 161.408 kb on + strand, within GFF924 at 161.426 kb on + strand, within GFF924 at 161.426 kb on + strand, within GFF924 at 161.426 kb on + strand, within GFF924 at 161.426 kb on + strand, within GFF924 at 161.426 kb on + strand, within GFF924 at 161.427 kb on - strand, within GFF924 at 161.453 kb on + strand at 161.454 kb on - strand at 161.464 kb on + strand at 161.465 kb on - strand at 161.485 kb on + strand at 161.485 kb on + strand at 161.485 kb on + strand at 161.485 kb on + strand at 161.485 kb on + strand at 161.485 kb on + strand at 161.485 kb on + strand at 161.486 kb on - strand at 161.486 kb on - strand at 161.566 kb on - strand at 161.573 kb on + strand at 161.573 kb on + strand at 161.573 kb on + strand at 161.573 kb on + strand at 161.573 kb on + strand at 161.587 kb on + strand at 161.587 kb on + strand at 161.587 kb on + strand at 161.588 kb on - strand at 161.598 kb on + strand at 161.616 kb on - strand at 161.616 kb on - strand at 161.658 kb on + strand at 161.658 kb on + strand at 161.658 kb on + strand at 161.658 kb on + strand at 161.659 kb on - strand at 161.659 kb on - strand at 161.681 kb on + strand at 161.694 kb on + strand at 161.704 kb on + strand at 161.704 kb on + strand at 161.740 kb on + strand, within GFF925 at 161.746 kb on + strand, within GFF925 at 161.748 kb on + strand, within GFF925 at 161.748 kb on + strand, within GFF925 at 161.748 kb on + strand, within GFF925 at 161.778 kb on + strand, within GFF925 at 161.779 kb on - strand, within GFF925 at 161.853 kb on + strand, within GFF925 at 161.853 kb on + strand, within GFF925 at 161.853 kb on + strand, within GFF925 at 161.853 kb on + strand, within GFF925 at 161.853 kb on + strand, within GFF925 at 161.853 kb on + strand, within GFF925 at 161.854 kb on - strand, within GFF925 at 161.854 kb on - strand, within GFF925 at 161.854 kb on - strand, within GFF925 at 161.858 kb on - strand, within GFF925 at 161.909 kb on + strand, within GFF925 at 161.909 kb on + strand, within GFF925 at 161.943 kb on + strand, within GFF925 at 161.944 kb on - strand, within GFF925 at 161.948 kb on + strand, within GFF925 at 161.948 kb on + strand, within GFF925 at 161.948 kb on + strand, within GFF925 at 161.948 kb on + strand, within GFF925 at 161.948 kb on + strand, within GFF925 at 161.948 kb on + strand, within GFF925 at 161.955 kb on + strand, within GFF925 at 161.955 kb on + strand, within GFF925 at 161.985 kb on + strand, within GFF925 at 161.985 kb on + strand, within GFF925 at 161.985 kb on + strand, within GFF925 at 161.985 kb on + strand, within GFF925 at 161.986 kb on - strand, within GFF925 at 161.986 kb on - strand, within GFF925 at 161.986 kb on - strand, within GFF925 at 162.090 kb on + strand, within GFF925 at 162.115 kb on + strand, within GFF925 at 162.149 kb on + strand, within GFF925 at 162.149 kb on + strand, within GFF925 at 162.213 kb on + strand, within GFF925 at 162.213 kb on + strand, within GFF925 at 162.213 kb on + strand, within GFF925 at 162.213 kb on + strand, within GFF925 at 162.213 kb on + strand, within GFF925 at 162.213 kb on + strand, within GFF925 at 162.214 kb on - strand, within GFF925 at 162.214 kb on - strand, within GFF925 at 162.214 kb on - strand, within GFF925 at 162.228 kb on + strand, within GFF925 at 162.228 kb on + strand, within GFF925 at 162.229 kb on - strand, within GFF925 at 162.336 kb on - strand, within GFF925 at 162.400 kb on - strand, within GFF925 at 162.487 kb on + strand at 162.513 kb on + strand at 162.513 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 159,500 + GFF923 0.14 -1.5 159,500 + GFF923 0.14 +0.5 159,500 + GFF923 0.14 -0.4 159,500 + GFF923 0.14 -0.1 159,500 + GFF923 0.14 -0.1 159,500 + GFF923 0.14 -0.7 159,500 + GFF923 0.14 -1.6 159,500 + GFF923 0.14 +1.5 159,501 - GFF923 0.14 -0.3 159,501 - GFF923 0.14 -1.1 159,501 - GFF923 0.14 -0.5 159,501 - GFF923 0.14 -0.9 159,502 + GFF923 0.14 -1.1 159,546 + GFF923 0.18 +0.5 159,640 - GFF923 0.26 -0.9 159,648 + GFF923 0.27 -0.6 159,648 + GFF923 0.27 +0.0 159,648 + GFF923 0.27 -1.1 159,648 + GFF923 0.27 -2.4 159,649 - GFF923 0.27 -0.1 159,649 - GFF923 0.27 +0.6 159,649 - GFF923 0.27 +0.0 159,653 + GFF923 0.27 -1.4 159,656 + GFF923 0.27 -1.6 159,666 + GFF923 0.28 -0.4 159,667 - GFF923 0.28 +0.6 159,667 - GFF923 0.28 -1.0 159,667 - GFF923 0.28 +1.1 159,670 + GFF923 0.29 -1.1 159,670 + GFF923 0.29 -1.4 159,670 + GFF923 0.29 -0.1 159,670 + GFF923 0.29 -0.1 159,671 - GFF923 0.29 -0.8 159,671 - GFF923 0.29 -0.7 159,671 - GFF923 0.29 -0.2 159,792 - GFF923 0.40 -0.3 159,792 - GFF923 0.40 -1.3 159,855 + GFF923 0.45 -0.4 159,855 + GFF923 0.45 +0.5 159,855 + GFF923 0.45 -0.1 159,855 + GFF923 0.45 +0.1 159,856 - GFF923 0.45 -0.3 159,856 - GFF923 0.45 -0.7 159,857 + GFF923 0.45 -1.4 159,857 + GFF923 0.45 -0.2 159,857 + GFF923 0.45 -0.6 159,857 + GFF923 0.45 -1.4 159,857 + GFF923 0.45 -1.1 159,857 + GFF923 0.45 -1.4 159,857 + GFF923 0.45 +0.1 159,857 + GFF923 0.45 -0.9 159,857 + GFF923 0.45 -0.2 159,857 + GFF923 0.45 +0.7 159,857 + GFF923 0.45 -0.5 159,858 - GFF923 0.45 -0.4 159,858 - GFF923 0.45 -1.9 159,858 - GFF923 0.45 -1.1 159,858 - GFF923 0.45 -0.7 159,858 - GFF923 0.45 -0.7 159,858 - GFF923 0.45 -0.3 159,858 - GFF923 0.45 +0.1 159,858 - GFF923 0.45 -0.1 159,858 - GFF923 0.45 -1.1 159,858 - GFF923 0.45 -2.4 159,858 - GFF923 0.45 -1.4 159,868 + GFF923 0.46 -1.1 159,877 + GFF923 0.47 -0.8 159,877 + GFF923 0.47 -0.8 159,878 - GFF923 0.47 -0.9 159,878 - GFF923 0.47 -0.9 159,898 + GFF923 0.49 -0.7 159,898 + GFF923 0.49 +0.7 159,927 + GFF923 0.52 -1.9 159,927 + GFF923 0.52 +0.3 159,928 - GFF923 0.52 -0.9 159,930 + GFF923 0.52 -0.7 159,986 + GFF923 0.57 -0.2 160,086 + GFF923 0.66 -0.4 160,086 + GFF923 0.66 +0.2 160,086 + GFF923 0.66 -0.2 160,086 + GFF923 0.66 -1.4 160,143 + GFF923 0.71 -0.1 160,144 - GFF923 0.71 -0.1 160,195 + GFF923 0.75 -0.8 160,195 + GFF923 0.75 -0.4 160,195 + GFF923 0.75 -0.1 160,196 - GFF923 0.75 +0.1 160,196 - GFF923 0.75 -0.3 160,229 + GFF923 0.78 -2.4 160,229 + GFF923 0.78 -1.9 160,229 + GFF923 0.78 +0.4 160,250 + GFF923 0.80 -1.0 160,250 + GFF923 0.80 -0.1 160,250 + GFF923 0.80 -0.8 160,250 + GFF923 0.80 -0.9 160,251 - GFF923 0.80 -1.6 160,277 + GFF923 0.83 -0.1 160,284 + GFF923 0.83 -0.1 160,284 + GFF923 0.83 -2.1 160,284 + GFF923 0.83 -1.4 160,329 + GFF923 0.87 -1.1 160,329 + GFF923 0.87 -0.4 160,329 + GFF923 0.87 -1.6 160,329 + GFF923 0.87 -1.0 160,329 + GFF923 0.87 -0.6 160,329 + GFF923 0.87 +0.4 160,329 + GFF923 0.87 -1.4 160,329 + GFF923 0.87 -0.6 160,329 + GFF923 0.87 -0.7 160,330 - GFF923 0.87 -0.6 160,330 - GFF923 0.87 -0.1 160,330 - GFF923 0.87 -1.1 160,418 + +0.3 160,419 - -1.1 160,420 + -0.2 160,420 + -0.8 160,420 + -0.4 160,421 - -1.6 160,421 - -0.4 160,421 - -0.4 160,421 - -2.1 160,421 - -0.6 160,421 - -2.3 160,421 - -1.1 160,421 - +0.3 160,421 - -0.8 160,421 - +0.6 160,421 - -1.9 160,442 + -1.3 160,442 + -1.1 160,443 - +0.2 160,443 - -0.6 160,460 + -0.4 160,485 + -0.6 160,485 + -0.9 160,496 + -0.1 160,497 - -1.1 160,504 + -1.1 160,504 + -1.7 160,505 - -1.1 160,646 + GFF924 0.14 -0.9 160,648 + GFF924 0.14 -1.4 160,648 + GFF924 0.14 -1.7 160,648 + GFF924 0.14 -0.9 160,648 + GFF924 0.14 -1.4 160,760 + GFF924 0.25 -0.9 160,761 - GFF924 0.25 -1.4 160,859 + GFF924 0.35 -1.4 160,881 + GFF924 0.37 -0.1 160,881 + GFF924 0.37 -1.1 160,882 - GFF924 0.37 -0.1 160,971 - GFF924 0.45 -1.4 161,090 + GFF924 0.57 +1.1 161,113 + GFF924 0.59 -1.7 161,114 - GFF924 0.59 -0.4 161,155 - GFF924 0.63 -0.7 161,341 + GFF924 0.81 -2.4 161,341 + GFF924 0.81 +0.2 161,408 + GFF924 0.87 -1.1 161,426 + GFF924 0.89 -1.1 161,426 + GFF924 0.89 -0.1 161,426 + GFF924 0.89 -1.1 161,426 + GFF924 0.89 -0.4 161,426 + GFF924 0.89 -1.0 161,427 - GFF924 0.89 +0.3 161,453 + +0.2 161,454 - -0.5 161,464 + +0.9 161,465 - -0.4 161,485 + +0.6 161,485 + +0.6 161,485 + -1.0 161,485 + -1.7 161,485 + -1.0 161,485 + -2.6 161,485 + -0.8 161,486 - -1.7 161,486 - +0.1 161,566 - -1.9 161,573 + -0.5 161,573 + -0.9 161,573 + -0.1 161,573 + -0.3 161,573 + -1.1 161,587 + -1.4 161,587 + +0.8 161,587 + +0.5 161,588 - +0.6 161,598 + +0.1 161,616 - -0.5 161,616 - -1.7 161,658 + -2.6 161,658 + -1.1 161,658 + +0.0 161,658 + -0.1 161,659 - -0.1 161,659 - -1.7 161,681 + -0.9 161,694 + -0.7 161,704 + -0.9 161,704 + -1.1 161,740 + GFF925 0.14 -0.1 161,746 + GFF925 0.14 -1.4 161,748 + GFF925 0.15 +0.6 161,748 + GFF925 0.15 +0.5 161,748 + GFF925 0.15 +0.6 161,778 + GFF925 0.18 -1.7 161,779 - GFF925 0.18 -0.5 161,853 + GFF925 0.26 -1.7 161,853 + GFF925 0.26 -2.1 161,853 + GFF925 0.26 -0.1 161,853 + GFF925 0.26 -2.0 161,853 + GFF925 0.26 -1.1 161,853 + GFF925 0.26 -1.2 161,854 - GFF925 0.26 -0.6 161,854 - GFF925 0.26 -2.1 161,854 - GFF925 0.26 -0.8 161,858 - GFF925 0.27 -1.9 161,909 + GFF925 0.33 +0.1 161,909 + GFF925 0.33 -0.5 161,943 + GFF925 0.36 -0.7 161,944 - GFF925 0.36 -1.1 161,948 + GFF925 0.37 -1.1 161,948 + GFF925 0.37 -0.3 161,948 + GFF925 0.37 -0.4 161,948 + GFF925 0.37 -0.3 161,948 + GFF925 0.37 -0.4 161,948 + GFF925 0.37 -1.1 161,955 + GFF925 0.38 +0.1 161,955 + GFF925 0.38 -0.9 161,985 + GFF925 0.41 -1.9 161,985 + GFF925 0.41 -1.1 161,985 + GFF925 0.41 -0.2 161,985 + GFF925 0.41 -0.4 161,986 - GFF925 0.41 -0.4 161,986 - GFF925 0.41 -1.0 161,986 - GFF925 0.41 -0.1 162,090 + GFF925 0.53 -1.1 162,115 + GFF925 0.55 -0.7 162,149 + GFF925 0.59 -1.4 162,149 + GFF925 0.59 -1.1 162,213 + GFF925 0.66 -0.9 162,213 + GFF925 0.66 -0.8 162,213 + GFF925 0.66 -0.4 162,213 + GFF925 0.66 -1.9 162,213 + GFF925 0.66 -1.4 162,213 + GFF925 0.66 -0.3 162,214 - GFF925 0.66 +0.1 162,214 - GFF925 0.66 -1.1 162,214 - GFF925 0.66 -0.7 162,228 + GFF925 0.68 -0.7 162,228 + GFF925 0.68 -0.1 162,229 - GFF925 0.68 +0.1 162,336 - GFF925 0.80 -2.4 162,400 - GFF925 0.87 -1.7 162,487 + -1.1 162,513 + +0.5 162,513 + +0.7
Or see this region's nucleotide sequence