Strain Fitness in Methylophilus sp. DMC18 around GFF770

Experiment: D-Glucose and casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose and casaminos (C)
7,274	+				+0.3
7,282	+				-1.4
7,282	+				-0.9
7,283	-				-1.2
7,300	+				-2.3
7,300	+				-0.7
7,301	-				-1.7
7,301	-				+0.9
7,301	-				-0.1
7,304	+				-1.4
7,304	+				-1.3
7,308	-				-1.7
7,319	+		GFF767	0.10	-0.7
7,319	+		GFF767	0.10	-1.0
7,319	+		GFF767	0.10	-1.3
7,319	+		GFF767	0.10	+0.0
7,319	+		GFF767	0.10	-1.1
7,320	-		GFF767	0.11	-0.5
7,320	-		GFF767	0.11	+0.6
7,320	-		GFF767	0.11	-0.4
7,320	-		GFF767	0.11	-0.6
7,320	-		GFF767	0.11	-1.6
7,320	-		GFF767	0.11	-0.5
7,320	-		GFF767	0.11	-0.0
7,320	-		GFF767	0.11	-0.4
7,322	+		GFF767	0.11	-0.7
7,322	+		GFF767	0.11	-1.7
7,426	-		GFF767	0.52	-1.4
7,431	-		GFF767	0.54	-0.6
7,518	+		GFF767	0.88	-0.5
7,519	-		GFF767	0.89	-1.8
7,546	-				-1.1
7,563	+				-0.5
7,563	+				+0.4
7,563	+				-0.8
7,618	+				-1.4
7,619	-				+0.5
7,619	-				-0.3
7,619	-				-0.1
7,619	-				-1.8
7,619	-				+1.4
7,622	+				-0.6
7,622	+				+0.6
7,622	+				+0.5
7,622	+				-0.7
7,623	-				-1.1
7,623	-				-0.2
7,665	+		GFF768	0.14	-1.9
7,666	-		GFF768	0.14	-0.6
7,666	-		GFF768	0.14	-1.1
7,667	+		GFF768	0.14	-1.0
7,668	-		GFF768	0.15	+0.7
7,668	-		GFF768	0.15	-0.3
7,676	-		GFF768	0.17	-2.0
7,724	+		GFF768	0.28	-0.7
7,725	-		GFF768	0.29	-0.3
7,744	-		GFF768	0.33	-0.7
7,749	-		GFF768	0.35	-0.5
7,755	+		GFF768	0.36	+0.4
7,755	+		GFF768	0.36	-0.7
7,782	+		GFF768	0.43	-0.2
7,782	+		GFF768	0.43	-0.1
7,782	+		GFF768	0.43	-0.9
7,782	+		GFF768	0.43	-0.2
7,782	+		GFF768	0.43	-0.1
7,782	+		GFF768	0.43	-1.1
7,782	+		GFF768	0.43	-2.2
7,782	+		GFF768	0.43	-1.6
7,783	-		GFF768	0.43	-0.0
7,783	-		GFF768	0.43	-0.9
7,783	-		GFF768	0.43	-0.6
7,783	-		GFF768	0.43	+1.5
7,803	+		GFF768	0.48	-0.8
7,803	+		GFF768	0.48	-0.6
7,803	+		GFF768	0.48	-1.1
7,803	+		GFF768	0.48	-0.3
7,803	+		GFF768	0.48	-0.4
7,803	+		GFF768	0.48	+0.7
7,803	+		GFF768	0.48	-0.1
7,804	-		GFF768	0.48	+0.9
7,804	-		GFF768	0.48	-0.5
7,804	-		GFF768	0.48	-0.9
7,804	-		GFF768	0.48	+0.9
7,829	+		GFF768	0.54	-1.9
7,829	+		GFF768	0.54	-0.6
7,829	+		GFF768	0.54	+0.9
7,854	+		GFF768	0.60	-0.2
7,854	+		GFF768	0.60	-0.4
7,855	-		GFF768	0.61	+0.2
7,855	-		GFF768	0.61	-1.3
7,855	-		GFF768	0.61	+0.3
7,855	-		GFF768	0.61	-0.4
7,855	-		GFF768	0.61	-0.3
7,856	+		GFF768	0.61	-0.5
7,856	+		GFF768	0.61	-0.5
7,856	+		GFF768	0.61	-0.7
7,857	-		GFF768	0.61	-0.4
7,857	-		GFF768	0.61	-2.1
7,962	+		GFF768	0.87	-0.7
7,964	+		GFF768	0.87	-0.3
7,998	+				-1.1
8,027	+				-1.0
8,092	+		GFF769	0.33	-1.1
8,092	+		GFF769	0.33	-0.1
8,092	+		GFF769	0.33	-0.4
8,092	+		GFF769	0.33	-1.7
8,093	-		GFF769	0.33	+0.7
8,093	-		GFF769	0.33	+0.3
8,093	-		GFF769	0.33	-0.6
8,093	-		GFF769	0.33	-0.1
8,094	+		GFF769	0.34	-0.1
8,095	-		GFF769	0.34	+0.1
8,095	-		GFF769	0.34	-0.4
8,095	-		GFF769	0.34	-0.1
8,117	+		GFF769	0.43	-2.6
8,117	+		GFF769	0.43	-1.0
8,117	+		GFF769	0.43	+1.4
8,117	+		GFF769	0.43	-2.5
8,118	-		GFF769	0.43	-0.1
8,118	-		GFF769	0.43	+0.1
8,118	-		GFF769	0.43	-1.7
8,126	+		GFF769	0.46	+0.1
8,127	-		GFF769	0.47	+0.3
8,127	-		GFF769	0.47	-0.6
8,133	+		GFF769	0.49	-0.4
8,134	-		GFF769	0.49	-0.1
8,138	+		GFF769	0.51	-1.1
8,138	+		GFF769	0.51	-0.9
8,138	+		GFF769	0.51	-0.4
8,157	+		GFF769	0.58	-3.1
8,157	+		GFF769	0.58	-0.2
8,157	+		GFF769	0.58	+0.4
8,164	+		GFF769	0.61	-0.9
8,170	+		GFF769	0.64	-2.2
8,170	+		GFF769	0.64	-2.2
8,170	+		GFF769	0.64	-0.7
8,170	+		GFF769	0.64	-0.5
8,170	+		GFF769	0.64	+0.3
8,171	-		GFF769	0.64	-0.6
8,171	-		GFF769	0.64	+0.6
8,171	-		GFF769	0.64	-0.4
8,267	+				-0.3
8,267	+				+0.3
8,267	+				-0.7
8,267	+				-0.9
8,267	+				-0.2
8,267	+				-0.4
8,268	-				-0.1
8,268	-				-0.4
8,268	-				-1.0
8,268	-				+0.1
8,271	+				-1.4
8,271	+				+0.2
8,271	+				-2.3
8,271	+				-1.7
8,271	+				-0.6
8,272	-				-0.8
8,272	-				+0.6
8,272	-				-0.7
8,272	-				+0.8
8,332	+		GFF770	0.28	-1.1
8,332	+		GFF770	0.28	-1.6
8,332	+		GFF770	0.28	-1.9
8,363	+		GFF770	0.42	-0.9
8,363	+		GFF770	0.42	-1.3
8,364	-		GFF770	0.42	-0.2
8,364	-		GFF770	0.42	-2.8
8,497	+				+0.1
8,497	+				-0.7
8,497	+				-2.6
8,497	+				-0.1
8,498	-				-2.4
8,498	-				+0.9
8,498	-				-2.1
8,498	-				-1.1
8,498	-				-1.1
8,498	-				-0.5
8,500	+				+1.1
8,500	+				+0.3
8,500	+				-1.7
8,501	-				-1.1
8,501	-				-1.1
8,529	-				-0.7
8,547	-				-2.0
8,702	+				-1.6
8,702	+				-0.5
8,703	-				-0.2
8,704	+				-1.1
8,795	+				+0.9
8,795	+				+0.6
8,796	-				-0.7
8,796	-				+0.3
8,796	-				+0.1
8,796	-				-1.3
8,846	+				+0.5
8,875	-				-1.0
8,875	-				+0.9
9,005	+				+0.5
9,005	+				-2.3
9,005	+				-1.2
9,005	+				-0.3
9,045	+				-1.7
9,045	+				-2.1
9,059	+				-1.0
9,059	+				-1.0
9,059	+				-0.7
9,059	+				-1.1
9,059	+				-1.1
9,059	+				-1.1
9,073	+				-1.1
9,073	+				-0.1
9,074	-				+0.5
9,074	-				-1.3
9,074	-				+0.0
9,141	+		GFF771	0.12	+0.1
9,141	+		GFF771	0.12	+0.1
9,141	+		GFF771	0.12	-0.3
9,142	-		GFF771	0.12	-0.7
9,279	+		GFF771	0.17	+1.1
9,421	+		GFF771	0.22	-0.3
9,421	+		GFF771	0.22	+0.6
9,466	+		GFF771	0.23	-0.2
9,466	+		GFF771	0.23	-0.9
9,477	+		GFF771	0.24	-1.4
9,477	+		GFF771	0.24	-0.6
9,477	+		GFF771	0.24	+0.1
9,478	-		GFF771	0.24	-0.1
9,478	-		GFF771	0.24	-0.7
9,478	-		GFF771	0.24	-0.1
9,485	+		GFF771	0.24	-0.4
9,485	+		GFF771	0.24	-1.4
9,485	+		GFF771	0.24	-0.4
9,485	+		GFF771	0.24	-0.4
9,485	+		GFF771	0.24	+0.9
9,485	+		GFF771	0.24	-0.3
9,486	-		GFF771	0.24	-0.4
9,486	-		GFF771	0.24	+0.1
9,486	-		GFF771	0.24	-1.6
9,486	-		GFF771	0.24	-0.8
9,486	-		GFF771	0.24	+0.5
9,486	-		GFF771	0.24	-0.5
9,486	-		GFF771	0.24	+0.9