Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF688 and GFF689 are separated by 1 nucleotides GFF689 and GFF690 are separated by 7 nucleotides GFF690 and GFF691 overlap by 8 nucleotides
GFF688 - hypothetical protein, at 765,889 to 767,289
GFF688
GFF689 - hypothetical protein, at 767,291 to 768,163
GFF689
GFF690 - hypothetical protein, at 768,171 to 769,058
GFF690
GFF691 - hypothetical protein, at 769,051 to 769,740
GFF691
Position (kb) 767
768
769 Strain fitness (log2 ratio) -2
-1
0
1 at 766.568 kb on + strand, within GFF688 at 766.812 kb on + strand, within GFF688 at 766.812 kb on + strand, within GFF688 at 766.859 kb on + strand, within GFF688 at 766.963 kb on + strand, within GFF688 at 766.965 kb on + strand, within GFF688 at 766.965 kb on + strand, within GFF688 at 767.000 kb on + strand, within GFF688 at 767.000 kb on + strand, within GFF688 at 767.048 kb on + strand, within GFF688 at 767.081 kb on + strand, within GFF688 at 767.120 kb on + strand, within GFF688 at 767.120 kb on + strand, within GFF688 at 767.120 kb on + strand, within GFF688 at 767.199 kb on + strand at 767.216 kb on + strand at 767.219 kb on + strand at 767.238 kb on + strand at 767.244 kb on + strand at 767.271 kb on + strand at 767.271 kb on + strand at 767.283 kb on + strand at 767.335 kb on + strand at 767.338 kb on + strand at 767.361 kb on + strand at 767.507 kb on + strand, within GFF689 at 767.595 kb on + strand, within GFF689 at 767.877 kb on + strand, within GFF689 at 767.973 kb on + strand, within GFF689 at 768.192 kb on - strand at 768.197 kb on + strand at 768.197 kb on + strand at 768.252 kb on + strand at 768.252 kb on + strand at 768.252 kb on + strand at 768.252 kb on + strand at 768.252 kb on + strand at 768.252 kb on + strand at 768.252 kb on + strand at 768.252 kb on + strand at 768.254 kb on + strand at 768.254 kb on + strand at 768.268 kb on + strand, within GFF690 at 768.323 kb on + strand, within GFF690 at 768.431 kb on - strand, within GFF690 at 768.435 kb on + strand, within GFF690 at 768.470 kb on - strand, within GFF690 at 768.613 kb on + strand, within GFF690 at 768.640 kb on + strand, within GFF690 at 768.641 kb on - strand, within GFF690 at 768.721 kb on + strand, within GFF690 at 768.749 kb on + strand, within GFF690 at 768.749 kb on + strand, within GFF690 at 768.750 kb on - strand, within GFF690 at 768.788 kb on + strand, within GFF690 at 768.886 kb on + strand, within GFF690 at 768.886 kb on + strand, within GFF690 at 768.900 kb on + strand, within GFF690 at 768.900 kb on + strand, within GFF690 at 768.900 kb on + strand, within GFF690 at 768.901 kb on - strand, within GFF690 at 768.904 kb on - strand, within GFF690 at 769.019 kb on + strand at 769.050 kb on + strand at 769.050 kb on + strand at 769.050 kb on + strand at 769.050 kb on + strand at 769.066 kb on + strand at 769.082 kb on + strand at 769.098 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 766,568 + GFF688 0.48 -0.5 766,812 + GFF688 0.66 +0.5 766,812 + GFF688 0.66 +0.9 766,859 + GFF688 0.69 -1.7 766,963 + GFF688 0.77 -0.1 766,965 + GFF688 0.77 -0.5 766,965 + GFF688 0.77 -0.5 767,000 + GFF688 0.79 -0.4 767,000 + GFF688 0.79 -1.5 767,048 + GFF688 0.83 -0.7 767,081 + GFF688 0.85 -1.1 767,120 + GFF688 0.88 -1.1 767,120 + GFF688 0.88 -1.5 767,120 + GFF688 0.88 -0.1 767,199 + -0.9 767,216 + +0.5 767,219 + -0.1 767,238 + +1.4 767,244 + -0.9 767,271 + +0.1 767,271 + -0.3 767,283 + -1.7 767,335 + -1.5 767,338 + -1.1 767,361 + -1.1 767,507 + GFF689 0.25 +0.5 767,595 + GFF689 0.35 -2.3 767,877 + GFF689 0.67 -1.1 767,973 + GFF689 0.78 -1.1 768,192 - +0.5 768,197 + -2.3 768,197 + -1.1 768,252 + +0.1 768,252 + -0.1 768,252 + -0.1 768,252 + -0.1 768,252 + -2.1 768,252 + -0.7 768,252 + -1.1 768,252 + -1.1 768,254 + +0.1 768,254 + -0.9 768,268 + GFF690 0.11 -1.5 768,323 + GFF690 0.17 -1.7 768,431 - GFF690 0.29 -1.0 768,435 + GFF690 0.30 -1.7 768,470 - GFF690 0.34 -2.1 768,613 + GFF690 0.50 -1.1 768,640 + GFF690 0.53 -1.1 768,641 - GFF690 0.53 -1.1 768,721 + GFF690 0.62 -0.1 768,749 + GFF690 0.65 -0.5 768,749 + GFF690 0.65 -1.6 768,750 - GFF690 0.65 -2.3 768,788 + GFF690 0.69 -1.3 768,886 + GFF690 0.81 -1.9 768,886 + GFF690 0.81 -1.7 768,900 + GFF690 0.82 +0.1 768,900 + GFF690 0.82 -1.5 768,900 + GFF690 0.82 -1.1 768,901 - GFF690 0.82 -1.5 768,904 - GFF690 0.83 -0.1 769,019 + -1.5 769,050 + -1.5 769,050 + -1.0 769,050 + +0.1 769,050 + -0.9 769,066 + -2.6 769,082 + -1.9 769,098 + -1.5
Or see this region's nucleotide sequence