Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF684 and GFF685 are separated by 351 nucleotides GFF685 and GFF686 are separated by 51 nucleotides
GFF684 - hypothetical protein, at 760,926 to 762,329
GFF684
GFF685 - hypothetical protein, at 762,681 to 763,826
GFF685
GFF686 - hypothetical protein, at 763,878 to 764,783
GFF686
Position (kb) 762
763
764 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 761.697 kb on - strand, within GFF684 at 761.697 kb on - strand, within GFF684 at 761.697 kb on - strand, within GFF684 at 761.699 kb on - strand, within GFF684 at 761.706 kb on - strand, within GFF684 at 761.706 kb on - strand, within GFF684 at 761.710 kb on - strand, within GFF684 at 761.710 kb on - strand, within GFF684 at 761.710 kb on - strand, within GFF684 at 761.725 kb on - strand, within GFF684 at 761.737 kb on - strand, within GFF684 at 761.746 kb on - strand, within GFF684 at 761.751 kb on - strand, within GFF684 at 761.755 kb on - strand, within GFF684 at 761.755 kb on - strand, within GFF684 at 761.819 kb on + strand, within GFF684 at 761.823 kb on - strand, within GFF684 at 761.823 kb on - strand, within GFF684 at 761.826 kb on - strand, within GFF684 at 761.826 kb on - strand, within GFF684 at 761.834 kb on - strand, within GFF684 at 761.837 kb on - strand, within GFF684 at 761.848 kb on - strand, within GFF684 at 761.888 kb on + strand, within GFF684 at 761.975 kb on + strand, within GFF684 at 761.975 kb on + strand, within GFF684 at 761.975 kb on + strand, within GFF684 at 761.976 kb on - strand, within GFF684 at 761.976 kb on - strand, within GFF684 at 761.976 kb on - strand, within GFF684 at 761.976 kb on - strand, within GFF684 at 761.976 kb on - strand, within GFF684 at 762.028 kb on + strand, within GFF684 at 762.029 kb on - strand, within GFF684 at 762.040 kb on + strand, within GFF684 at 762.040 kb on + strand, within GFF684 at 762.041 kb on - strand, within GFF684 at 762.055 kb on - strand, within GFF684 at 762.202 kb on + strand at 762.206 kb on + strand at 762.207 kb on - strand at 762.207 kb on - strand at 762.228 kb on + strand at 762.229 kb on - strand at 762.229 kb on - strand at 762.229 kb on - strand at 762.265 kb on + strand at 762.266 kb on - strand at 762.364 kb on + strand at 762.364 kb on + strand at 762.365 kb on - strand at 762.365 kb on - strand at 762.381 kb on + strand at 762.384 kb on - strand at 762.384 kb on - strand at 762.400 kb on + strand at 762.401 kb on - strand at 762.425 kb on + strand at 762.425 kb on + strand at 762.425 kb on + strand at 762.426 kb on - strand at 762.452 kb on - strand at 762.492 kb on + strand at 762.522 kb on + strand at 762.523 kb on - strand at 762.530 kb on - strand at 762.549 kb on + strand at 762.550 kb on - strand at 762.578 kb on + strand at 762.581 kb on + strand at 762.590 kb on + strand at 762.590 kb on + strand at 762.601 kb on + strand at 762.601 kb on + strand at 762.635 kb on - strand at 762.637 kb on + strand at 762.702 kb on + strand at 762.734 kb on + strand at 762.734 kb on + strand at 762.747 kb on - strand at 762.825 kb on + strand, within GFF685 at 762.825 kb on + strand, within GFF685 at 762.826 kb on - strand, within GFF685 at 762.896 kb on + strand, within GFF685 at 762.930 kb on - strand, within GFF685 at 763.035 kb on - strand, within GFF685 at 763.156 kb on + strand, within GFF685 at 763.215 kb on + strand, within GFF685 at 763.230 kb on - strand, within GFF685 at 763.232 kb on + strand, within GFF685 at 763.232 kb on + strand, within GFF685 at 763.344 kb on - strand, within GFF685 at 763.367 kb on - strand, within GFF685 at 763.367 kb on - strand, within GFF685 at 763.399 kb on - strand, within GFF685 at 763.462 kb on + strand, within GFF685 at 763.474 kb on + strand, within GFF685 at 763.524 kb on + strand, within GFF685 at 763.525 kb on - strand, within GFF685 at 763.533 kb on + strand, within GFF685 at 763.533 kb on + strand, within GFF685 at 763.533 kb on + strand, within GFF685 at 763.533 kb on + strand, within GFF685 at 763.533 kb on + strand, within GFF685 at 763.534 kb on - strand, within GFF685 at 763.535 kb on + strand, within GFF685 at 763.536 kb on - strand, within GFF685 at 763.559 kb on - strand, within GFF685 at 763.559 kb on - strand, within GFF685 at 763.694 kb on - strand, within GFF685 at 763.782 kb on + strand at 763.782 kb on + strand at 763.830 kb on + strand at 763.831 kb on - strand at 763.834 kb on + strand at 763.834 kb on + strand at 763.835 kb on - strand at 763.837 kb on + strand at 763.837 kb on + strand at 763.837 kb on + strand at 763.837 kb on + strand at 763.838 kb on - strand at 763.839 kb on + strand at 763.839 kb on + strand at 763.839 kb on + strand at 763.840 kb on - strand at 763.853 kb on + strand at 763.853 kb on + strand at 763.853 kb on + strand at 763.854 kb on - strand at 763.855 kb on + strand at 763.856 kb on - strand at 763.894 kb on + strand at 763.909 kb on + strand at 763.909 kb on + strand at 763.931 kb on + strand at 763.931 kb on + strand at 763.963 kb on + strand at 763.963 kb on + strand at 763.963 kb on + strand at 763.963 kb on + strand at 763.964 kb on - strand at 763.966 kb on + strand at 763.967 kb on - strand at 763.970 kb on + strand, within GFF686 at 763.975 kb on + strand, within GFF686 at 763.975 kb on + strand, within GFF686 at 763.975 kb on + strand, within GFF686 at 764.006 kb on + strand, within GFF686 at 764.006 kb on + strand, within GFF686 at 764.006 kb on + strand, within GFF686 at 764.006 kb on + strand, within GFF686 at 764.007 kb on - strand, within GFF686 at 764.010 kb on - strand, within GFF686 at 764.026 kb on + strand, within GFF686 at 764.026 kb on + strand, within GFF686 at 764.043 kb on - strand, within GFF686 at 764.071 kb on + strand, within GFF686 at 764.075 kb on + strand, within GFF686 at 764.075 kb on + strand, within GFF686 at 764.076 kb on - strand, within GFF686 at 764.098 kb on + strand, within GFF686 at 764.111 kb on + strand, within GFF686 at 764.120 kb on + strand, within GFF686 at 764.120 kb on + strand, within GFF686 at 764.120 kb on + strand, within GFF686 at 764.132 kb on + strand, within GFF686 at 764.152 kb on + strand, within GFF686 at 764.152 kb on + strand, within GFF686 at 764.152 kb on + strand, within GFF686 at 764.190 kb on + strand, within GFF686 at 764.190 kb on + strand, within GFF686 at 764.191 kb on - strand, within GFF686 at 764.191 kb on - strand, within GFF686 at 764.210 kb on + strand, within GFF686 at 764.210 kb on + strand, within GFF686 at 764.210 kb on + strand, within GFF686 at 764.210 kb on + strand, within GFF686 at 764.210 kb on + strand, within GFF686 at 764.210 kb on + strand, within GFF686 at 764.210 kb on + strand, within GFF686 at 764.210 kb on + strand, within GFF686 at 764.211 kb on - strand, within GFF686 at 764.211 kb on - strand, within GFF686 at 764.211 kb on - strand, within GFF686 at 764.215 kb on + strand, within GFF686 at 764.215 kb on + strand, within GFF686 at 764.215 kb on + strand, within GFF686 at 764.269 kb on + strand, within GFF686 at 764.270 kb on - strand, within GFF686 at 764.270 kb on - strand, within GFF686 at 764.273 kb on + strand, within GFF686 at 764.273 kb on + strand, within GFF686 at 764.291 kb on + strand, within GFF686 at 764.291 kb on + strand, within GFF686 at 764.291 kb on + strand, within GFF686 at 764.291 kb on + strand, within GFF686 at 764.306 kb on + strand, within GFF686 at 764.307 kb on - strand, within GFF686 at 764.327 kb on + strand, within GFF686 at 764.342 kb on + strand, within GFF686 at 764.343 kb on - strand, within GFF686 at 764.485 kb on + strand, within GFF686 at 764.494 kb on + strand, within GFF686 at 764.494 kb on + strand, within GFF686 at 764.494 kb on + strand, within GFF686 at 764.501 kb on + strand, within GFF686 at 764.502 kb on - strand, within GFF686 at 764.609 kb on + strand, within GFF686 at 764.638 kb on + strand, within GFF686 at 764.638 kb on + strand, within GFF686 at 764.639 kb on - strand, within GFF686 at 764.770 kb on + strand at 764.781 kb on + strand at 764.781 kb on + strand at 764.781 kb on + strand at 764.781 kb on + strand at 764.781 kb on + strand at 764.809 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 761,697 - GFF684 0.55 +0.5 761,697 - GFF684 0.55 +0.2 761,697 - GFF684 0.55 +0.1 761,699 - GFF684 0.55 +0.5 761,706 - GFF684 0.56 -0.1 761,706 - GFF684 0.56 +1.1 761,710 - GFF684 0.56 -0.1 761,710 - GFF684 0.56 -0.9 761,710 - GFF684 0.56 -1.1 761,725 - GFF684 0.57 -0.1 761,737 - GFF684 0.58 -1.1 761,746 - GFF684 0.58 -1.1 761,751 - GFF684 0.59 -0.1 761,755 - GFF684 0.59 -1.1 761,755 - GFF684 0.59 +0.3 761,819 + GFF684 0.64 -1.7 761,823 - GFF684 0.64 -1.0 761,823 - GFF684 0.64 -1.1 761,826 - GFF684 0.64 -1.0 761,826 - GFF684 0.64 -0.7 761,834 - GFF684 0.65 +0.2 761,837 - GFF684 0.65 -1.7 761,848 - GFF684 0.66 +0.1 761,888 + GFF684 0.69 -0.9 761,975 + GFF684 0.75 -1.5 761,975 + GFF684 0.75 -0.7 761,975 + GFF684 0.75 -0.1 761,976 - GFF684 0.75 +0.5 761,976 - GFF684 0.75 -2.1 761,976 - GFF684 0.75 -0.1 761,976 - GFF684 0.75 -0.5 761,976 - GFF684 0.75 -1.1 762,028 + GFF684 0.78 -1.5 762,029 - GFF684 0.79 -1.1 762,040 + GFF684 0.79 -1.7 762,040 + GFF684 0.79 -0.1 762,041 - GFF684 0.79 +1.2 762,055 - GFF684 0.80 +0.0 762,202 + -1.7 762,206 + -0.9 762,207 - -0.7 762,207 - -0.1 762,228 + -1.5 762,229 - -1.7 762,229 - -1.1 762,229 - +0.9 762,265 + -1.1 762,266 - +0.5 762,364 + -0.1 762,364 + -1.1 762,365 - -0.9 762,365 - +0.3 762,381 + -0.7 762,384 - -1.1 762,384 - -2.6 762,400 + -0.1 762,401 - -0.5 762,425 + -1.9 762,425 + -0.3 762,425 + -0.1 762,426 - +0.2 762,452 - -0.5 762,492 + +1.1 762,522 + -2.1 762,523 - +0.5 762,530 - -1.5 762,549 + +0.9 762,550 - -0.4 762,578 + +0.5 762,581 + -2.1 762,590 + -0.4 762,590 + -0.1 762,601 + -0.7 762,601 + -3.5 762,635 - -1.7 762,637 + -1.5 762,702 + -1.1 762,734 + +0.1 762,734 + -1.1 762,747 - -1.1 762,825 + GFF685 0.13 -1.1 762,825 + GFF685 0.13 -0.5 762,826 - GFF685 0.13 -1.7 762,896 + GFF685 0.19 -1.1 762,930 - GFF685 0.22 +0.5 763,035 - GFF685 0.31 -1.5 763,156 + GFF685 0.41 -1.9 763,215 + GFF685 0.47 -0.5 763,230 - GFF685 0.48 -1.5 763,232 + GFF685 0.48 -0.9 763,232 + GFF685 0.48 -0.7 763,344 - GFF685 0.58 -1.1 763,367 - GFF685 0.60 -1.1 763,367 - GFF685 0.60 -1.1 763,399 - GFF685 0.63 +0.2 763,462 + GFF685 0.68 -1.5 763,474 + GFF685 0.69 -1.1 763,524 + GFF685 0.74 -1.5 763,525 - GFF685 0.74 -0.5 763,533 + GFF685 0.74 -0.1 763,533 + GFF685 0.74 -0.5 763,533 + GFF685 0.74 +0.1 763,533 + GFF685 0.74 -1.1 763,533 + GFF685 0.74 -0.7 763,534 - GFF685 0.74 -1.1 763,535 + GFF685 0.75 -0.1 763,536 - GFF685 0.75 -0.1 763,559 - GFF685 0.77 -1.1 763,559 - GFF685 0.77 -1.1 763,694 - GFF685 0.88 -1.7 763,782 + -0.5 763,782 + -0.1 763,830 + -0.6 763,831 - -1.1 763,834 + -1.7 763,834 + -1.5 763,835 - -0.0 763,837 + +0.5 763,837 + -1.1 763,837 + +0.7 763,837 + -2.0 763,838 - +1.0 763,839 + -0.1 763,839 + +0.5 763,839 + -0.9 763,840 - -0.1 763,853 + +0.5 763,853 + -0.1 763,853 + -0.9 763,854 - -0.1 763,855 + +0.1 763,856 - +0.9 763,894 + -0.1 763,909 + -1.5 763,909 + -0.7 763,931 + -1.5 763,931 + -0.3 763,963 + +0.1 763,963 + -0.7 763,963 + -0.8 763,963 + +0.1 763,964 - +0.2 763,966 + +0.1 763,967 - -0.9 763,970 + GFF686 0.10 +0.3 763,975 + GFF686 0.11 -0.7 763,975 + GFF686 0.11 -0.1 763,975 + GFF686 0.11 +0.9 764,006 + GFF686 0.14 -1.2 764,006 + GFF686 0.14 -2.5 764,006 + GFF686 0.14 -1.7 764,006 + GFF686 0.14 +0.5 764,007 - GFF686 0.14 -0.9 764,010 - GFF686 0.15 -1.5 764,026 + GFF686 0.16 +1.1 764,026 + GFF686 0.16 -0.5 764,043 - GFF686 0.18 -0.9 764,071 + GFF686 0.21 -0.7 764,075 + GFF686 0.22 -1.4 764,075 + GFF686 0.22 +0.1 764,076 - GFF686 0.22 +0.1 764,098 + GFF686 0.24 +0.5 764,111 + GFF686 0.26 -0.1 764,120 + GFF686 0.27 -0.5 764,120 + GFF686 0.27 +0.9 764,120 + GFF686 0.27 -1.9 764,132 + GFF686 0.28 +0.5 764,152 + GFF686 0.30 -1.4 764,152 + GFF686 0.30 -0.5 764,152 + GFF686 0.30 -0.4 764,190 + GFF686 0.34 -1.8 764,190 + GFF686 0.34 -0.7 764,191 - GFF686 0.35 +0.9 764,191 - GFF686 0.35 +0.1 764,210 + GFF686 0.37 -2.3 764,210 + GFF686 0.37 -1.5 764,210 + GFF686 0.37 -0.0 764,210 + GFF686 0.37 -0.5 764,210 + GFF686 0.37 +0.7 764,210 + GFF686 0.37 -0.1 764,210 + GFF686 0.37 +0.1 764,210 + GFF686 0.37 -1.5 764,211 - GFF686 0.37 -0.0 764,211 - GFF686 0.37 -0.5 764,211 - GFF686 0.37 -0.2 764,215 + GFF686 0.37 -1.1 764,215 + GFF686 0.37 +0.1 764,215 + GFF686 0.37 -0.0 764,269 + GFF686 0.43 -0.0 764,270 - GFF686 0.43 -0.1 764,270 - GFF686 0.43 -2.1 764,273 + GFF686 0.44 -1.1 764,273 + GFF686 0.44 -0.0 764,291 + GFF686 0.46 -0.5 764,291 + GFF686 0.46 -1.1 764,291 + GFF686 0.46 -0.4 764,291 + GFF686 0.46 -0.0 764,306 + GFF686 0.47 -0.3 764,307 - GFF686 0.47 -0.1 764,327 + GFF686 0.50 +0.1 764,342 + GFF686 0.51 -1.0 764,343 - GFF686 0.51 -1.5 764,485 + GFF686 0.67 -2.1 764,494 + GFF686 0.68 -1.7 764,494 + GFF686 0.68 -1.3 764,494 + GFF686 0.68 -0.1 764,501 + GFF686 0.69 -0.1 764,502 - GFF686 0.69 -1.7 764,609 + GFF686 0.81 -1.7 764,638 + GFF686 0.84 -2.1 764,638 + GFF686 0.84 +0.9 764,639 - GFF686 0.84 -0.5 764,770 + +0.5 764,781 + -0.5 764,781 + +0.9 764,781 + -0.1 764,781 + -0.9 764,781 + -1.5 764,809 + -0.1
Or see this region's nucleotide sequence