Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF659 and GFF660 are separated by 909 nucleotides GFF660 and GFF661 are separated by 33 nucleotides
GFF659 - Dihydrofolate synthase/folylpolyglutamate synthase, at 731,355 to 732,650
GFF659
GFF660 - Colicin V production protein, at 733,560 to 734,078
GFF660
GFF661 - Amidophosphoribosyltransferase, at 734,112 to 735,647
GFF661
Position (kb) 733
734
735 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 732.625 kb on + strand at 732.625 kb on + strand at 732.648 kb on + strand at 732.864 kb on + strand at 732.894 kb on + strand at 732.894 kb on + strand at 732.925 kb on + strand at 732.972 kb on + strand at 732.972 kb on + strand at 732.973 kb on - strand at 733.470 kb on + strand at 733.470 kb on + strand at 733.481 kb on + strand at 733.526 kb on + strand at 733.544 kb on + strand at 733.545 kb on - strand at 733.551 kb on + strand at 733.551 kb on + strand at 733.552 kb on - strand at 733.555 kb on + strand at 733.555 kb on + strand at 733.555 kb on + strand at 733.555 kb on + strand at 733.555 kb on + strand at 733.555 kb on + strand at 733.556 kb on - strand at 733.556 kb on - strand at 733.559 kb on + strand at 733.559 kb on + strand at 733.559 kb on + strand at 733.559 kb on + strand at 733.560 kb on - strand at 733.567 kb on + strand at 733.567 kb on + strand at 733.567 kb on + strand at 733.568 kb on - strand at 733.575 kb on + strand at 733.575 kb on + strand at 733.575 kb on + strand at 733.579 kb on + strand at 733.579 kb on + strand at 733.579 kb on + strand at 733.579 kb on + strand at 733.579 kb on + strand at 733.579 kb on + strand at 733.582 kb on + strand at 733.582 kb on + strand at 733.585 kb on + strand at 733.674 kb on + strand, within GFF660 at 733.678 kb on + strand, within GFF660 at 733.694 kb on + strand, within GFF660 at 733.710 kb on + strand, within GFF660 at 733.710 kb on + strand, within GFF660 at 733.710 kb on + strand, within GFF660 at 733.710 kb on + strand, within GFF660 at 733.710 kb on + strand, within GFF660 at 733.710 kb on + strand, within GFF660 at 733.711 kb on - strand, within GFF660 at 733.711 kb on - strand, within GFF660 at 733.712 kb on + strand, within GFF660 at 733.712 kb on + strand, within GFF660 at 733.712 kb on + strand, within GFF660 at 733.712 kb on + strand, within GFF660 at 733.712 kb on + strand, within GFF660 at 733.712 kb on + strand, within GFF660 at 733.780 kb on + strand, within GFF660 at 733.780 kb on + strand, within GFF660 at 733.780 kb on + strand, within GFF660 at 733.793 kb on + strand, within GFF660 at 733.793 kb on + strand, within GFF660 at 733.793 kb on + strand, within GFF660 at 733.826 kb on + strand, within GFF660 at 733.856 kb on + strand, within GFF660 at 733.856 kb on + strand, within GFF660 at 733.904 kb on + strand, within GFF660 at 733.904 kb on + strand, within GFF660 at 733.904 kb on + strand, within GFF660 at 734.021 kb on + strand, within GFF660 at 734.021 kb on + strand, within GFF660 at 734.021 kb on + strand, within GFF660 at 734.021 kb on + strand, within GFF660 at 734.021 kb on + strand, within GFF660 at 734.021 kb on + strand, within GFF660 at 734.076 kb on + strand at 734.076 kb on + strand at 734.100 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 732,625 + -1.9 732,625 + -0.4 732,648 + -3.4 732,864 + -1.1 732,894 + +0.1 732,894 + -0.7 732,925 + +0.2 732,972 + -3.3 732,972 + -1.7 732,973 - -1.1 733,470 + -1.5 733,470 + -2.5 733,481 + -0.9 733,526 + -1.6 733,544 + -2.8 733,545 - -1.2 733,551 + -1.3 733,551 + -1.3 733,552 - -1.5 733,555 + -2.5 733,555 + -1.4 733,555 + -2.7 733,555 + -0.2 733,555 + -1.0 733,555 + -1.2 733,556 - -0.1 733,556 - -0.7 733,559 + -0.4 733,559 + -2.6 733,559 + -0.7 733,559 + -0.7 733,560 - -1.9 733,567 + -1.1 733,567 + -0.7 733,567 + -1.6 733,568 - -1.7 733,575 + -1.0 733,575 + -1.1 733,575 + -1.5 733,579 + -1.5 733,579 + -0.4 733,579 + -2.3 733,579 + -1.0 733,579 + -1.9 733,579 + -1.7 733,582 + -1.1 733,582 + +0.1 733,585 + -2.8 733,674 + GFF660 0.22 +0.1 733,678 + GFF660 0.23 -0.7 733,694 + GFF660 0.26 -0.7 733,710 + GFF660 0.29 +0.1 733,710 + GFF660 0.29 -1.1 733,710 + GFF660 0.29 -0.1 733,710 + GFF660 0.29 -0.5 733,710 + GFF660 0.29 -1.5 733,710 + GFF660 0.29 -2.0 733,711 - GFF660 0.29 -0.1 733,711 - GFF660 0.29 -1.1 733,712 + GFF660 0.29 -1.1 733,712 + GFF660 0.29 -1.5 733,712 + GFF660 0.29 -0.7 733,712 + GFF660 0.29 -2.0 733,712 + GFF660 0.29 -0.5 733,712 + GFF660 0.29 +0.3 733,780 + GFF660 0.42 -1.3 733,780 + GFF660 0.42 +0.3 733,780 + GFF660 0.42 -1.5 733,793 + GFF660 0.45 -2.0 733,793 + GFF660 0.45 -1.4 733,793 + GFF660 0.45 -0.9 733,826 + GFF660 0.51 -0.9 733,856 + GFF660 0.57 -1.5 733,856 + GFF660 0.57 -1.7 733,904 + GFF660 0.66 -0.8 733,904 + GFF660 0.66 -1.1 733,904 + GFF660 0.66 -0.5 734,021 + GFF660 0.89 -1.6 734,021 + GFF660 0.89 -1.1 734,021 + GFF660 0.89 -1.1 734,021 + GFF660 0.89 -1.9 734,021 + GFF660 0.89 -0.1 734,021 + GFF660 0.89 -1.3 734,076 + -1.5 734,076 + -0.9 734,100 + -1.1
Or see this region's nucleotide sequence