Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF320 and GFF321 are separated by 38 nucleotides GFF321 and GFF322 are separated by 29 nucleotides
GFF320 - Small-conductance mechanosensitive channel, at 341,520 to 342,383
GFF320
GFF321 - Amylosucrase, at 342,422 to 344,371
GFF321
GFF322 - D-inositol-3-phosphate glycosyltransferase, at 344,401 to 346,563
GFF322
Position (kb) 342
343
344
345 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 341.426 kb on + strand at 341.426 kb on + strand at 341.426 kb on + strand at 341.426 kb on + strand at 341.426 kb on + strand at 341.427 kb on - strand at 341.427 kb on - strand at 341.427 kb on - strand at 341.431 kb on + strand at 341.431 kb on + strand at 341.431 kb on + strand at 341.432 kb on - strand at 341.432 kb on - strand at 341.432 kb on - strand at 341.432 kb on - strand at 341.432 kb on - strand at 341.457 kb on + strand at 341.518 kb on + strand at 341.519 kb on - strand at 341.542 kb on + strand at 341.549 kb on + strand at 341.573 kb on + strand at 341.573 kb on + strand at 341.573 kb on + strand at 341.573 kb on + strand at 341.574 kb on - strand at 341.611 kb on + strand, within GFF320 at 341.611 kb on + strand, within GFF320 at 341.612 kb on - strand, within GFF320 at 341.637 kb on + strand, within GFF320 at 341.637 kb on + strand, within GFF320 at 341.637 kb on + strand, within GFF320 at 341.646 kb on + strand, within GFF320 at 341.723 kb on + strand, within GFF320 at 341.727 kb on - strand, within GFF320 at 341.727 kb on - strand, within GFF320 at 341.732 kb on + strand, within GFF320 at 341.733 kb on - strand, within GFF320 at 341.733 kb on - strand, within GFF320 at 341.748 kb on - strand, within GFF320 at 341.751 kb on + strand, within GFF320 at 341.751 kb on + strand, within GFF320 at 341.752 kb on - strand, within GFF320 at 341.752 kb on - strand, within GFF320 at 341.752 kb on - strand, within GFF320 at 341.752 kb on - strand, within GFF320 at 341.752 kb on - strand, within GFF320 at 341.752 kb on - strand, within GFF320 at 341.752 kb on - strand, within GFF320 at 341.752 kb on - strand, within GFF320 at 341.782 kb on - strand, within GFF320 at 341.782 kb on - strand, within GFF320 at 341.806 kb on + strand, within GFF320 at 341.806 kb on + strand, within GFF320 at 341.806 kb on + strand, within GFF320 at 341.807 kb on - strand, within GFF320 at 341.807 kb on - strand, within GFF320 at 341.807 kb on - strand, within GFF320 at 341.812 kb on - strand, within GFF320 at 341.812 kb on - strand, within GFF320 at 341.812 kb on - strand, within GFF320 at 341.812 kb on - strand, within GFF320 at 341.887 kb on + strand, within GFF320 at 341.887 kb on + strand, within GFF320 at 341.887 kb on + strand, within GFF320 at 341.887 kb on + strand, within GFF320 at 341.888 kb on - strand, within GFF320 at 341.888 kb on - strand, within GFF320 at 341.888 kb on - strand, within GFF320 at 341.888 kb on - strand, within GFF320 at 341.888 kb on - strand, within GFF320 at 341.888 kb on - strand, within GFF320 at 341.923 kb on + strand, within GFF320 at 341.923 kb on + strand, within GFF320 at 341.934 kb on - strand, within GFF320 at 342.026 kb on - strand, within GFF320 at 342.026 kb on - strand, within GFF320 at 342.026 kb on - strand, within GFF320 at 342.138 kb on - strand, within GFF320 at 342.166 kb on + strand, within GFF320 at 342.166 kb on + strand, within GFF320 at 342.167 kb on - strand, within GFF320 at 342.167 kb on - strand, within GFF320 at 342.220 kb on - strand, within GFF320 at 342.220 kb on - strand, within GFF320 at 342.239 kb on + strand, within GFF320 at 342.240 kb on - strand, within GFF320 at 342.287 kb on - strand, within GFF320 at 342.363 kb on + strand at 342.364 kb on - strand at 342.367 kb on + strand at 342.367 kb on + strand at 342.368 kb on - strand at 342.368 kb on - strand at 342.368 kb on - strand at 342.368 kb on - strand at 342.372 kb on - strand at 342.372 kb on - strand at 342.423 kb on + strand at 342.424 kb on - strand at 342.462 kb on - strand at 342.462 kb on - strand at 342.501 kb on - strand at 342.524 kb on - strand at 342.524 kb on - strand at 342.591 kb on - strand at 342.591 kb on - strand at 342.591 kb on - strand at 342.591 kb on - strand at 342.591 kb on - strand at 342.621 kb on - strand, within GFF321 at 342.621 kb on - strand, within GFF321 at 342.621 kb on - strand, within GFF321 at 342.621 kb on - strand, within GFF321 at 342.621 kb on - strand, within GFF321 at 342.625 kb on - strand, within GFF321 at 342.625 kb on - strand, within GFF321 at 342.625 kb on - strand, within GFF321 at 342.625 kb on - strand, within GFF321 at 342.662 kb on - strand, within GFF321 at 342.869 kb on - strand, within GFF321 at 342.886 kb on - strand, within GFF321 at 342.889 kb on - strand, within GFF321 at 342.889 kb on - strand, within GFF321 at 343.090 kb on - strand, within GFF321 at 343.204 kb on - strand, within GFF321 at 343.204 kb on - strand, within GFF321 at 343.271 kb on - strand, within GFF321 at 343.321 kb on - strand, within GFF321 at 343.321 kb on - strand, within GFF321 at 343.533 kb on - strand, within GFF321 at 343.537 kb on + strand, within GFF321 at 343.538 kb on - strand, within GFF321 at 343.542 kb on - strand, within GFF321 at 343.542 kb on - strand, within GFF321 at 343.606 kb on - strand, within GFF321 at 343.606 kb on - strand, within GFF321 at 343.750 kb on - strand, within GFF321 at 343.750 kb on - strand, within GFF321 at 343.759 kb on - strand, within GFF321 at 343.762 kb on - strand, within GFF321 at 343.770 kb on + strand, within GFF321 at 343.771 kb on - strand, within GFF321 at 344.020 kb on + strand, within GFF321 at 344.021 kb on - strand, within GFF321 at 344.021 kb on - strand, within GFF321 at 344.021 kb on - strand, within GFF321 at 344.021 kb on - strand, within GFF321 at 344.021 kb on - strand, within GFF321 at 344.169 kb on + strand, within GFF321 at 344.170 kb on - strand, within GFF321 at 344.213 kb on - strand at 344.233 kb on - strand at 344.254 kb on - strand at 344.292 kb on + strand at 344.367 kb on + strand at 344.368 kb on - strand at 344.368 kb on - strand at 344.368 kb on - strand at 344.398 kb on - strand at 344.424 kb on + strand at 344.694 kb on - strand, within GFF322 at 344.778 kb on - strand, within GFF322 at 344.778 kb on - strand, within GFF322 at 344.822 kb on - strand, within GFF322 at 344.849 kb on - strand, within GFF322 at 344.849 kb on - strand, within GFF322 at 344.849 kb on - strand, within GFF322 at 344.849 kb on - strand, within GFF322 at 344.870 kb on - strand, within GFF322 at 344.870 kb on - strand, within GFF322 at 344.922 kb on - strand, within GFF322 at 344.971 kb on - strand, within GFF322 at 345.110 kb on - strand, within GFF322 at 345.110 kb on - strand, within GFF322 at 345.230 kb on + strand, within GFF322 at 345.230 kb on + strand, within GFF322 at 345.231 kb on - strand, within GFF322 at 345.231 kb on - strand, within GFF322 at 345.231 kb on - strand, within GFF322 at 345.231 kb on - strand, within GFF322 at 345.231 kb on - strand, within GFF322 at 345.231 kb on - strand, within GFF322 at 345.231 kb on - strand, within GFF322 at 345.231 kb on - strand, within GFF322 at 345.231 kb on - strand, within GFF322 at 345.257 kb on + strand, within GFF322 at 345.258 kb on - strand, within GFF322 at 345.258 kb on - strand, within GFF322 at 345.258 kb on - strand, within GFF322 at 345.258 kb on - strand, within GFF322 at 345.258 kb on - strand, within GFF322 at 345.258 kb on - strand, within GFF322 at 345.367 kb on + strand, within GFF322 at 345.368 kb on - strand, within GFF322 at 345.368 kb on - strand, within GFF322
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 341,426 + +0.2 341,426 + -1.2 341,426 + -0.9 341,426 + -0.1 341,426 + +0.2 341,427 - -1.6 341,427 - -1.1 341,427 - +0.1 341,431 + +0.5 341,431 + -0.5 341,431 + -0.5 341,432 - -0.1 341,432 - -2.1 341,432 - +0.1 341,432 - -0.6 341,432 - -1.1 341,457 + +0.5 341,518 + -0.2 341,519 - -1.3 341,542 + -3.3 341,549 + +0.5 341,573 + -1.6 341,573 + -0.6 341,573 + -0.1 341,573 + -1.9 341,574 - -2.5 341,611 + GFF320 0.11 -0.1 341,611 + GFF320 0.11 -1.1 341,612 - GFF320 0.11 -0.1 341,637 + GFF320 0.14 -1.1 341,637 + GFF320 0.14 -0.2 341,637 + GFF320 0.14 +1.2 341,646 + GFF320 0.15 -0.4 341,723 + GFF320 0.23 -1.4 341,727 - GFF320 0.24 -1.1 341,727 - GFF320 0.24 -0.6 341,732 + GFF320 0.25 -0.1 341,733 - GFF320 0.25 +0.4 341,733 - GFF320 0.25 -0.4 341,748 - GFF320 0.26 -0.9 341,751 + GFF320 0.27 -1.4 341,751 + GFF320 0.27 -0.8 341,752 - GFF320 0.27 -0.9 341,752 - GFF320 0.27 +1.3 341,752 - GFF320 0.27 -0.9 341,752 - GFF320 0.27 -1.1 341,752 - GFF320 0.27 -0.6 341,752 - GFF320 0.27 -0.1 341,752 - GFF320 0.27 -0.2 341,752 - GFF320 0.27 -0.1 341,782 - GFF320 0.30 +0.4 341,782 - GFF320 0.30 -0.8 341,806 + GFF320 0.33 -0.9 341,806 + GFF320 0.33 -0.5 341,806 + GFF320 0.33 -1.1 341,807 - GFF320 0.33 -1.1 341,807 - GFF320 0.33 +0.9 341,807 - GFF320 0.33 +0.5 341,812 - GFF320 0.34 -0.5 341,812 - GFF320 0.34 -0.4 341,812 - GFF320 0.34 -0.4 341,812 - GFF320 0.34 -1.0 341,887 + GFF320 0.42 -1.9 341,887 + GFF320 0.42 -0.1 341,887 + GFF320 0.42 +0.1 341,887 + GFF320 0.42 +0.2 341,888 - GFF320 0.43 -0.1 341,888 - GFF320 0.43 +0.5 341,888 - GFF320 0.43 -0.6 341,888 - GFF320 0.43 -0.1 341,888 - GFF320 0.43 -1.1 341,888 - GFF320 0.43 -0.1 341,923 + GFF320 0.47 +0.9 341,923 + GFF320 0.47 +0.1 341,934 - GFF320 0.48 -0.9 342,026 - GFF320 0.59 +1.5 342,026 - GFF320 0.59 -1.4 342,026 - GFF320 0.59 -1.5 342,138 - GFF320 0.72 -0.1 342,166 + GFF320 0.75 -1.1 342,166 + GFF320 0.75 -0.9 342,167 - GFF320 0.75 -0.9 342,167 - GFF320 0.75 -0.9 342,220 - GFF320 0.81 +0.3 342,220 - GFF320 0.81 +0.1 342,239 + GFF320 0.83 -1.4 342,240 - GFF320 0.83 -1.5 342,287 - GFF320 0.89 -0.1 342,363 + -0.3 342,364 - +0.3 342,367 + -1.1 342,367 + -2.1 342,368 - +0.3 342,368 - -1.2 342,368 - -0.5 342,368 - -1.1 342,372 - -0.6 342,372 - +0.2 342,423 + -1.1 342,424 - -1.1 342,462 - -1.1 342,462 - -1.9 342,501 - -1.4 342,524 - -0.4 342,524 - -0.4 342,591 - -1.3 342,591 - -0.4 342,591 - -1.1 342,591 - -0.1 342,591 - +0.9 342,621 - GFF321 0.10 -2.2 342,621 - GFF321 0.10 -0.1 342,621 - GFF321 0.10 -0.1 342,621 - GFF321 0.10 -1.2 342,621 - GFF321 0.10 -0.4 342,625 - GFF321 0.10 -0.4 342,625 - GFF321 0.10 -1.4 342,625 - GFF321 0.10 -0.2 342,625 - GFF321 0.10 -1.2 342,662 - GFF321 0.12 -2.5 342,869 - GFF321 0.23 -1.6 342,886 - GFF321 0.24 -1.2 342,889 - GFF321 0.24 -1.6 342,889 - GFF321 0.24 -1.1 343,090 - GFF321 0.34 -1.4 343,204 - GFF321 0.40 -0.6 343,204 - GFF321 0.40 -1.9 343,271 - GFF321 0.44 -0.5 343,321 - GFF321 0.46 -2.1 343,321 - GFF321 0.46 -1.1 343,533 - GFF321 0.57 -1.2 343,537 + GFF321 0.57 -0.1 343,538 - GFF321 0.57 -0.4 343,542 - GFF321 0.57 -1.6 343,542 - GFF321 0.57 -0.1 343,606 - GFF321 0.61 -1.1 343,606 - GFF321 0.61 -0.9 343,750 - GFF321 0.68 -2.2 343,750 - GFF321 0.68 -1.1 343,759 - GFF321 0.69 -1.1 343,762 - GFF321 0.69 -1.6 343,770 + GFF321 0.69 -1.1 343,771 - GFF321 0.69 -1.6 344,020 + GFF321 0.82 -1.4 344,021 - GFF321 0.82 +0.5 344,021 - GFF321 0.82 -0.9 344,021 - GFF321 0.82 -1.1 344,021 - GFF321 0.82 -1.1 344,021 - GFF321 0.82 -1.2 344,169 + GFF321 0.90 -1.9 344,170 - GFF321 0.90 -1.4 344,213 - -1.1 344,233 - -1.6 344,254 - -1.4 344,292 + -1.1 344,367 + -0.6 344,368 - -0.3 344,368 - -0.9 344,368 - -1.1 344,398 - -2.1 344,424 + -3.0 344,694 - GFF322 0.14 -0.8 344,778 - GFF322 0.17 -1.9 344,778 - GFF322 0.17 -2.2 344,822 - GFF322 0.19 -1.1 344,849 - GFF322 0.21 -1.1 344,849 - GFF322 0.21 -1.1 344,849 - GFF322 0.21 -1.1 344,849 - GFF322 0.21 -2.2 344,870 - GFF322 0.22 -1.9 344,870 - GFF322 0.22 -1.4 344,922 - GFF322 0.24 -1.6 344,971 - GFF322 0.26 -0.3 345,110 - GFF322 0.33 -1.1 345,110 - GFF322 0.33 -2.6 345,230 + GFF322 0.38 -0.6 345,230 + GFF322 0.38 -1.1 345,231 - GFF322 0.38 -0.1 345,231 - GFF322 0.38 -0.7 345,231 - GFF322 0.38 -1.1 345,231 - GFF322 0.38 -0.1 345,231 - GFF322 0.38 -0.3 345,231 - GFF322 0.38 +0.1 345,231 - GFF322 0.38 -1.1 345,231 - GFF322 0.38 -0.5 345,231 - GFF322 0.38 -1.3 345,257 + GFF322 0.40 -1.4 345,258 - GFF322 0.40 +0.1 345,258 - GFF322 0.40 -0.9 345,258 - GFF322 0.40 -0.2 345,258 - GFF322 0.40 -0.1 345,258 - GFF322 0.40 -0.6 345,258 - GFF322 0.40 -1.1 345,367 + GFF322 0.45 +0.2 345,368 - GFF322 0.45 +0.1 345,368 - GFF322 0.45 -1.1
Or see this region's nucleotide sequence