Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF292 and GFF293 are separated by 52 nucleotides GFF293 and GFF294 overlap by 4 nucleotides
GFF292 - hypothetical protein, at 311,303 to 312,433
GFF292
GFF293 - hypothetical protein, at 312,486 to 314,021
GFF293
GFF294 - ADP-heptose--LPS heptosyltransferase 2, at 314,018 to 315,049
GFF294
Position (kb) 312
313
314
315 Strain fitness (log2 ratio) -2
-1
0
1 at 311.659 kb on - strand, within GFF292 at 311.659 kb on - strand, within GFF292 at 311.659 kb on - strand, within GFF292 at 311.659 kb on - strand, within GFF292 at 311.716 kb on - strand, within GFF292 at 311.971 kb on - strand, within GFF292 at 312.046 kb on - strand, within GFF292 at 312.058 kb on - strand, within GFF292 at 312.096 kb on - strand, within GFF292 at 312.226 kb on - strand, within GFF292 at 312.258 kb on - strand, within GFF292 at 312.525 kb on - strand at 312.605 kb on - strand at 312.642 kb on - strand, within GFF293 at 312.642 kb on - strand, within GFF293 at 312.642 kb on - strand, within GFF293 at 312.644 kb on - strand, within GFF293 at 312.644 kb on - strand, within GFF293 at 312.647 kb on - strand, within GFF293 at 312.653 kb on - strand, within GFF293 at 312.696 kb on - strand, within GFF293 at 312.696 kb on - strand, within GFF293 at 312.848 kb on - strand, within GFF293 at 312.897 kb on - strand, within GFF293 at 313.213 kb on - strand, within GFF293 at 313.213 kb on - strand, within GFF293 at 313.327 kb on - strand, within GFF293 at 313.430 kb on - strand, within GFF293 at 313.635 kb on - strand, within GFF293 at 313.637 kb on - strand, within GFF293 at 313.637 kb on - strand, within GFF293 at 313.637 kb on - strand, within GFF293 at 313.744 kb on - strand, within GFF293 at 313.771 kb on - strand, within GFF293 at 313.794 kb on + strand, within GFF293 at 313.926 kb on - strand at 313.928 kb on - strand at 313.932 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 311,659 - GFF292 0.31 -0.9 311,659 - GFF292 0.31 -1.6 311,659 - GFF292 0.31 +0.2 311,659 - GFF292 0.31 -0.4 311,716 - GFF292 0.37 -1.4 311,971 - GFF292 0.59 -1.1 312,046 - GFF292 0.66 -0.1 312,058 - GFF292 0.67 -2.2 312,096 - GFF292 0.70 -0.4 312,226 - GFF292 0.82 -0.9 312,258 - GFF292 0.84 -1.1 312,525 - -1.1 312,605 - -1.1 312,642 - GFF293 0.10 -1.6 312,642 - GFF293 0.10 +0.5 312,642 - GFF293 0.10 -0.4 312,644 - GFF293 0.10 +0.3 312,644 - GFF293 0.10 -0.6 312,647 - GFF293 0.10 -0.1 312,653 - GFF293 0.11 -0.1 312,696 - GFF293 0.14 -1.4 312,696 - GFF293 0.14 -1.1 312,848 - GFF293 0.24 -1.1 312,897 - GFF293 0.27 -1.6 313,213 - GFF293 0.47 -1.6 313,213 - GFF293 0.47 -1.1 313,327 - GFF293 0.55 -1.1 313,430 - GFF293 0.61 -1.4 313,635 - GFF293 0.75 -0.3 313,637 - GFF293 0.75 -1.9 313,637 - GFF293 0.75 -0.4 313,637 - GFF293 0.75 -1.1 313,744 - GFF293 0.82 -1.4 313,771 - GFF293 0.84 -1.6 313,794 + GFF293 0.85 -1.1 313,926 - -0.4 313,928 - -0.1 313,932 - +0.7
Or see this region's nucleotide sequence