Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2795 and GFF2796 are separated by 167 nucleotides GFF2796 and GFF2797 are separated by 152 nucleotides
GFF2795 - 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating, at 22,335 to 23,849
GFF2795
GFF2796 - Carboxymethylenebutenolidase, at 24,017 to 24,757
GFF2796
GFF2797 - hypothetical protein, at 24,910 to 25,893
GFF2797
Position (kb) 24
25 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 23.177 kb on - strand, within GFF2795 at 23.206 kb on + strand, within GFF2795 at 23.207 kb on - strand, within GFF2795 at 23.207 kb on - strand, within GFF2795 at 23.236 kb on + strand, within GFF2795 at 23.264 kb on - strand, within GFF2795 at 23.264 kb on - strand, within GFF2795 at 23.354 kb on + strand, within GFF2795 at 23.397 kb on - strand, within GFF2795 at 23.538 kb on - strand, within GFF2795 at 23.538 kb on - strand, within GFF2795 at 23.538 kb on - strand, within GFF2795 at 23.540 kb on + strand, within GFF2795 at 23.540 kb on + strand, within GFF2795 at 23.541 kb on - strand, within GFF2795 at 23.541 kb on - strand, within GFF2795 at 23.541 kb on - strand, within GFF2795 at 23.541 kb on - strand, within GFF2795 at 23.541 kb on - strand, within GFF2795 at 23.646 kb on + strand, within GFF2795 at 23.748 kb on - strand at 23.749 kb on + strand at 23.749 kb on + strand at 23.762 kb on + strand at 23.762 kb on + strand at 23.762 kb on + strand at 23.763 kb on - strand at 23.783 kb on + strand at 23.784 kb on - strand at 23.817 kb on + strand at 23.817 kb on + strand at 23.818 kb on - strand at 23.818 kb on - strand at 23.843 kb on + strand at 23.849 kb on + strand at 23.849 kb on + strand at 23.849 kb on + strand at 23.850 kb on - strand at 23.850 kb on - strand at 23.850 kb on - strand at 23.850 kb on - strand at 23.850 kb on - strand at 23.850 kb on - strand at 23.850 kb on - strand at 23.850 kb on - strand at 23.850 kb on - strand at 23.850 kb on - strand at 23.850 kb on - strand at 23.870 kb on + strand at 23.871 kb on - strand at 23.876 kb on - strand at 23.916 kb on + strand at 23.921 kb on + strand at 23.921 kb on + strand at 23.922 kb on - strand at 23.922 kb on - strand at 23.922 kb on - strand at 23.922 kb on - strand at 23.922 kb on - strand at 23.922 kb on - strand at 23.922 kb on - strand at 23.922 kb on - strand at 23.922 kb on - strand at 23.922 kb on - strand at 23.922 kb on - strand at 23.922 kb on - strand at 23.925 kb on + strand at 23.925 kb on + strand at 23.925 kb on + strand at 23.926 kb on - strand at 23.926 kb on - strand at 23.926 kb on - strand at 23.926 kb on - strand at 23.926 kb on - strand at 23.926 kb on - strand at 23.926 kb on - strand at 23.926 kb on - strand at 23.926 kb on - strand at 23.926 kb on - strand at 23.926 kb on - strand at 23.926 kb on - strand at 23.985 kb on + strand at 23.986 kb on + strand at 23.987 kb on - strand at 23.987 kb on - strand at 23.987 kb on - strand at 24.014 kb on - strand at 24.019 kb on - strand at 24.019 kb on - strand at 24.019 kb on - strand at 24.019 kb on - strand at 24.019 kb on - strand at 24.027 kb on - strand at 24.027 kb on - strand at 24.058 kb on - strand at 24.085 kb on - strand at 24.141 kb on + strand, within GFF2796 at 24.141 kb on + strand, within GFF2796 at 24.141 kb on + strand, within GFF2796 at 24.142 kb on - strand, within GFF2796 at 24.142 kb on - strand, within GFF2796 at 24.174 kb on + strand, within GFF2796 at 24.175 kb on - strand, within GFF2796 at 24.175 kb on - strand, within GFF2796 at 24.175 kb on - strand, within GFF2796 at 24.175 kb on - strand, within GFF2796 at 24.190 kb on + strand, within GFF2796 at 24.190 kb on + strand, within GFF2796 at 24.191 kb on - strand, within GFF2796 at 24.191 kb on - strand, within GFF2796 at 24.191 kb on - strand, within GFF2796 at 24.203 kb on - strand, within GFF2796 at 24.229 kb on + strand, within GFF2796 at 24.229 kb on + strand, within GFF2796 at 24.230 kb on - strand, within GFF2796 at 24.318 kb on + strand, within GFF2796 at 24.318 kb on + strand, within GFF2796 at 24.318 kb on + strand, within GFF2796 at 24.319 kb on - strand, within GFF2796 at 24.319 kb on - strand, within GFF2796 at 24.319 kb on - strand, within GFF2796 at 24.436 kb on - strand, within GFF2796 at 24.436 kb on - strand, within GFF2796 at 24.436 kb on - strand, within GFF2796 at 24.466 kb on - strand, within GFF2796 at 24.526 kb on - strand, within GFF2796 at 24.700 kb on - strand at 24.700 kb on - strand at 24.700 kb on - strand at 24.700 kb on - strand at 24.700 kb on - strand at 24.700 kb on - strand at 24.703 kb on + strand at 24.703 kb on + strand at 24.703 kb on + strand at 24.703 kb on + strand at 24.704 kb on - strand at 24.704 kb on - strand at 24.704 kb on - strand at 24.704 kb on - strand at 24.704 kb on - strand at 24.704 kb on - strand at 24.704 kb on - strand at 24.760 kb on + strand at 24.760 kb on + strand at 24.760 kb on + strand at 24.761 kb on - strand at 24.761 kb on - strand at 24.761 kb on - strand at 24.796 kb on - strand at 24.823 kb on + strand at 24.823 kb on + strand at 24.823 kb on + strand at 24.823 kb on + strand at 24.877 kb on - strand at 24.909 kb on + strand at 24.909 kb on + strand at 24.909 kb on + strand at 24.910 kb on - strand at 24.910 kb on - strand at 24.998 kb on - strand at 25.086 kb on + strand, within GFF2797 at 25.086 kb on + strand, within GFF2797 at 25.086 kb on + strand, within GFF2797 at 25.086 kb on + strand, within GFF2797 at 25.086 kb on + strand, within GFF2797 at 25.086 kb on + strand, within GFF2797 at 25.087 kb on - strand, within GFF2797 at 25.087 kb on - strand, within GFF2797 at 25.087 kb on - strand, within GFF2797 at 25.087 kb on - strand, within GFF2797 at 25.087 kb on - strand, within GFF2797 at 25.087 kb on - strand, within GFF2797 at 25.087 kb on - strand, within GFF2797 at 25.087 kb on - strand, within GFF2797 at 25.087 kb on - strand, within GFF2797 at 25.152 kb on + strand, within GFF2797 at 25.152 kb on + strand, within GFF2797 at 25.194 kb on + strand, within GFF2797 at 25.194 kb on + strand, within GFF2797 at 25.216 kb on + strand, within GFF2797 at 25.217 kb on - strand, within GFF2797 at 25.259 kb on + strand, within GFF2797 at 25.259 kb on + strand, within GFF2797 at 25.259 kb on + strand, within GFF2797 at 25.259 kb on + strand, within GFF2797 at 25.259 kb on + strand, within GFF2797 at 25.259 kb on + strand, within GFF2797 at 25.259 kb on + strand, within GFF2797 at 25.260 kb on - strand, within GFF2797 at 25.260 kb on - strand, within GFF2797 at 25.264 kb on + strand, within GFF2797 at 25.265 kb on - strand, within GFF2797 at 25.265 kb on - strand, within GFF2797 at 25.265 kb on - strand, within GFF2797 at 25.345 kb on + strand, within GFF2797 at 25.345 kb on + strand, within GFF2797 at 25.345 kb on + strand, within GFF2797 at 25.345 kb on + strand, within GFF2797 at 25.345 kb on + strand, within GFF2797 at 25.345 kb on + strand, within GFF2797 at 25.345 kb on + strand, within GFF2797 at 25.346 kb on - strand, within GFF2797 at 25.346 kb on - strand, within GFF2797 at 25.346 kb on - strand, within GFF2797 at 25.346 kb on - strand, within GFF2797 at 25.346 kb on - strand, within GFF2797 at 25.346 kb on - strand, within GFF2797 at 25.346 kb on - strand, within GFF2797 at 25.346 kb on - strand, within GFF2797 at 25.389 kb on + strand, within GFF2797 at 25.445 kb on + strand, within GFF2797 at 25.445 kb on + strand, within GFF2797 at 25.446 kb on - strand, within GFF2797 at 25.446 kb on - strand, within GFF2797 at 25.455 kb on + strand, within GFF2797 at 25.456 kb on - strand, within GFF2797 at 25.456 kb on - strand, within GFF2797 at 25.477 kb on + strand, within GFF2797 at 25.477 kb on + strand, within GFF2797 at 25.477 kb on + strand, within GFF2797 at 25.477 kb on + strand, within GFF2797 at 25.478 kb on - strand, within GFF2797 at 25.478 kb on - strand, within GFF2797 at 25.478 kb on - strand, within GFF2797 at 25.483 kb on + strand, within GFF2797 at 25.483 kb on + strand, within GFF2797 at 25.483 kb on + strand, within GFF2797 at 25.485 kb on + strand, within GFF2797 at 25.485 kb on + strand, within GFF2797 at 25.505 kb on + strand, within GFF2797 at 25.571 kb on + strand, within GFF2797 at 25.571 kb on + strand, within GFF2797 at 25.571 kb on + strand, within GFF2797 at 25.571 kb on + strand, within GFF2797 at 25.572 kb on - strand, within GFF2797 at 25.615 kb on + strand, within GFF2797 at 25.640 kb on + strand, within GFF2797 at 25.699 kb on + strand, within GFF2797 at 25.699 kb on + strand, within GFF2797 at 25.700 kb on - strand, within GFF2797 at 25.700 kb on - strand, within GFF2797 at 25.700 kb on - strand, within GFF2797 at 25.700 kb on - strand, within GFF2797 at 25.715 kb on + strand, within GFF2797 at 25.715 kb on + strand, within GFF2797 at 25.716 kb on - strand, within GFF2797 at 25.753 kb on + strand, within GFF2797 at 25.753 kb on + strand, within GFF2797 at 25.753 kb on + strand, within GFF2797 at 25.753 kb on + strand, within GFF2797 at 25.753 kb on + strand, within GFF2797 at 25.757 kb on + strand, within GFF2797 at 25.757 kb on + strand, within GFF2797
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 23,177 - GFF2795 0.56 -0.9 23,206 + GFF2795 0.57 -1.9 23,207 - GFF2795 0.58 -2.8 23,207 - GFF2795 0.58 -0.9 23,236 + GFF2795 0.59 -0.9 23,264 - GFF2795 0.61 -1.3 23,264 - GFF2795 0.61 -0.2 23,354 + GFF2795 0.67 -1.1 23,397 - GFF2795 0.70 -1.5 23,538 - GFF2795 0.79 -2.1 23,538 - GFF2795 0.79 -0.9 23,538 - GFF2795 0.79 -0.9 23,540 + GFF2795 0.80 -0.4 23,540 + GFF2795 0.80 -1.4 23,541 - GFF2795 0.80 -0.8 23,541 - GFF2795 0.80 +0.3 23,541 - GFF2795 0.80 +0.1 23,541 - GFF2795 0.80 +0.5 23,541 - GFF2795 0.80 -1.3 23,646 + GFF2795 0.87 -0.3 23,748 - +0.5 23,749 + -1.1 23,749 + +0.3 23,762 + +0.1 23,762 + -1.3 23,762 + -1.8 23,763 - -0.2 23,783 + -0.9 23,784 - -0.1 23,817 + +0.6 23,817 + -0.5 23,818 - -0.5 23,818 - -1.5 23,843 + -0.4 23,849 + -0.9 23,849 + -1.3 23,849 + -0.3 23,850 - -1.8 23,850 - -0.5 23,850 - -0.9 23,850 - -0.6 23,850 - -1.4 23,850 - +0.5 23,850 - -1.3 23,850 - -0.7 23,850 - +0.3 23,850 - -0.9 23,850 - -0.5 23,870 + +0.1 23,871 - +0.1 23,876 - -1.8 23,916 + -0.3 23,921 + -0.9 23,921 + -0.5 23,922 - -0.9 23,922 - -0.5 23,922 - -0.9 23,922 - -0.9 23,922 - -0.9 23,922 - -1.9 23,922 - -2.3 23,922 - -1.9 23,922 - -2.5 23,922 - -2.3 23,922 - -0.9 23,922 - -0.9 23,925 + -0.5 23,925 + +0.1 23,925 + +0.7 23,926 - -1.8 23,926 - -0.4 23,926 - -1.3 23,926 - -2.4 23,926 - -1.8 23,926 - +0.6 23,926 - -0.1 23,926 - -1.3 23,926 - +1.6 23,926 - -0.8 23,926 - -1.1 23,926 - -1.3 23,985 + -0.9 23,986 + -2.1 23,987 - +0.3 23,987 - -0.9 23,987 - -1.3 24,014 - +0.1 24,019 - -1.2 24,019 - -1.9 24,019 - +0.8 24,019 - -0.5 24,019 - -1.9 24,027 - -1.5 24,027 - +0.4 24,058 - -0.5 24,085 - -0.9 24,141 + GFF2796 0.17 +0.1 24,141 + GFF2796 0.17 +0.1 24,141 + GFF2796 0.17 -2.3 24,142 - GFF2796 0.17 -0.3 24,142 - GFF2796 0.17 -1.5 24,174 + GFF2796 0.21 -1.3 24,175 - GFF2796 0.21 -0.9 24,175 - GFF2796 0.21 -2.8 24,175 - GFF2796 0.21 -1.1 24,175 - GFF2796 0.21 -2.1 24,190 + GFF2796 0.23 -0.9 24,190 + GFF2796 0.23 -2.1 24,191 - GFF2796 0.23 -0.5 24,191 - GFF2796 0.23 +0.1 24,191 - GFF2796 0.23 -1.1 24,203 - GFF2796 0.25 -1.3 24,229 + GFF2796 0.29 -0.8 24,229 + GFF2796 0.29 -0.8 24,230 - GFF2796 0.29 -1.1 24,318 + GFF2796 0.41 +0.1 24,318 + GFF2796 0.41 +0.3 24,318 + GFF2796 0.41 -0.3 24,319 - GFF2796 0.41 -0.9 24,319 - GFF2796 0.41 -1.5 24,319 - GFF2796 0.41 -1.3 24,436 - GFF2796 0.57 -0.9 24,436 - GFF2796 0.57 +0.1 24,436 - GFF2796 0.57 -0.9 24,466 - GFF2796 0.61 -1.3 24,526 - GFF2796 0.69 +0.3 24,700 - -0.1 24,700 - +0.2 24,700 - +0.3 24,700 - -0.9 24,700 - +0.1 24,700 - +0.2 24,703 + +0.1 24,703 + +0.1 24,703 + -1.5 24,703 + -1.1 24,704 - -1.2 24,704 - +0.2 24,704 - -0.4 24,704 - -0.4 24,704 - -0.3 24,704 - -0.9 24,704 - -0.7 24,760 + -0.9 24,760 + +0.4 24,760 + -0.6 24,761 - +0.6 24,761 - -1.3 24,761 - -0.9 24,796 - -1.4 24,823 + +0.5 24,823 + -0.6 24,823 + +0.1 24,823 + -0.4 24,877 - -1.8 24,909 + -0.5 24,909 + -1.4 24,909 + +0.4 24,910 - +0.1 24,910 - -0.5 24,998 - -0.9 25,086 + GFF2797 0.18 +0.1 25,086 + GFF2797 0.18 +0.2 25,086 + GFF2797 0.18 -0.5 25,086 + GFF2797 0.18 +0.5 25,086 + GFF2797 0.18 -0.5 25,086 + GFF2797 0.18 +0.1 25,087 - GFF2797 0.18 -1.9 25,087 - GFF2797 0.18 -0.5 25,087 - GFF2797 0.18 -0.9 25,087 - GFF2797 0.18 +0.7 25,087 - GFF2797 0.18 +0.5 25,087 - GFF2797 0.18 -1.8 25,087 - GFF2797 0.18 +0.8 25,087 - GFF2797 0.18 -1.3 25,087 - GFF2797 0.18 -1.8 25,152 + GFF2797 0.25 -1.3 25,152 + GFF2797 0.25 -0.3 25,194 + GFF2797 0.29 -0.5 25,194 + GFF2797 0.29 -0.7 25,216 + GFF2797 0.31 +0.2 25,217 - GFF2797 0.31 -0.5 25,259 + GFF2797 0.35 -0.2 25,259 + GFF2797 0.35 -0.4 25,259 + GFF2797 0.35 -0.9 25,259 + GFF2797 0.35 -2.6 25,259 + GFF2797 0.35 +0.8 25,259 + GFF2797 0.35 -1.3 25,259 + GFF2797 0.35 -0.3 25,260 - GFF2797 0.36 -1.3 25,260 - GFF2797 0.36 -0.5 25,264 + GFF2797 0.36 -1.5 25,265 - GFF2797 0.36 -0.1 25,265 - GFF2797 0.36 -0.9 25,265 - GFF2797 0.36 -2.6 25,345 + GFF2797 0.44 -1.3 25,345 + GFF2797 0.44 -1.9 25,345 + GFF2797 0.44 -0.9 25,345 + GFF2797 0.44 -0.5 25,345 + GFF2797 0.44 -1.5 25,345 + GFF2797 0.44 -0.2 25,345 + GFF2797 0.44 -0.5 25,346 - GFF2797 0.44 -1.5 25,346 - GFF2797 0.44 +0.1 25,346 - GFF2797 0.44 -0.8 25,346 - GFF2797 0.44 -0.9 25,346 - GFF2797 0.44 -0.4 25,346 - GFF2797 0.44 -1.3 25,346 - GFF2797 0.44 +0.4 25,346 - GFF2797 0.44 -1.1 25,389 + GFF2797 0.49 -2.9 25,445 + GFF2797 0.54 -1.2 25,445 + GFF2797 0.54 -0.8 25,446 - GFF2797 0.54 -0.9 25,446 - GFF2797 0.54 -0.5 25,455 + GFF2797 0.55 +1.2 25,456 - GFF2797 0.55 +0.6 25,456 - GFF2797 0.55 -0.4 25,477 + GFF2797 0.58 +0.4 25,477 + GFF2797 0.58 -0.8 25,477 + GFF2797 0.58 -0.9 25,477 + GFF2797 0.58 -0.6 25,478 - GFF2797 0.58 -0.8 25,478 - GFF2797 0.58 -1.3 25,478 - GFF2797 0.58 +0.6 25,483 + GFF2797 0.58 -0.7 25,483 + GFF2797 0.58 -1.3 25,483 + GFF2797 0.58 -0.9 25,485 + GFF2797 0.58 -0.8 25,485 + GFF2797 0.58 -1.3 25,505 + GFF2797 0.60 +1.2 25,571 + GFF2797 0.67 -0.5 25,571 + GFF2797 0.67 -0.0 25,571 + GFF2797 0.67 -0.7 25,571 + GFF2797 0.67 -0.9 25,572 - GFF2797 0.67 -1.2 25,615 + GFF2797 0.72 -0.9 25,640 + GFF2797 0.74 +0.5 25,699 + GFF2797 0.80 -0.3 25,699 + GFF2797 0.80 -1.3 25,700 - GFF2797 0.80 -0.4 25,700 - GFF2797 0.80 +1.1 25,700 - GFF2797 0.80 -1.5 25,700 - GFF2797 0.80 +0.1 25,715 + GFF2797 0.82 +0.1 25,715 + GFF2797 0.82 -1.5 25,716 - GFF2797 0.82 +0.2 25,753 + GFF2797 0.86 -0.5 25,753 + GFF2797 0.86 -0.3 25,753 + GFF2797 0.86 +0.1 25,753 + GFF2797 0.86 -1.3 25,753 + GFF2797 0.86 -0.7 25,757 + GFF2797 0.86 +0.7 25,757 + GFF2797 0.86 +0.1
Or see this region's nucleotide sequence