Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2745 and GFF2746 are separated by 218 nucleotides GFF2746 and GFF2747 are separated by 14 nucleotides
GFF2745 - tRNA threonylcarbamoyladenosine dehydratase, at 147,633 to 148,445
GFF2745
GFF2746 - Fructose-1,6-bisphosphatase class 1, at 148,664 to 149,659
GFF2746
GFF2747 - Fructose-bisphosphate aldolase, at 149,674 to 150,708
GFF2747
Position (kb) 148
149
150 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 147.696 kb on + strand at 147.696 kb on + strand at 147.696 kb on + strand at 147.696 kb on + strand at 147.696 kb on + strand at 147.697 kb on - strand at 147.697 kb on - strand at 147.697 kb on - strand at 147.697 kb on - strand at 147.830 kb on + strand, within GFF2745 at 147.830 kb on + strand, within GFF2745 at 147.830 kb on + strand, within GFF2745 at 147.831 kb on - strand, within GFF2745 at 147.831 kb on - strand, within GFF2745 at 147.934 kb on + strand, within GFF2745 at 147.934 kb on + strand, within GFF2745 at 147.934 kb on + strand, within GFF2745 at 147.935 kb on - strand, within GFF2745 at 147.935 kb on - strand, within GFF2745 at 148.059 kb on + strand, within GFF2745 at 148.344 kb on + strand, within GFF2745 at 148.344 kb on + strand, within GFF2745 at 148.355 kb on + strand, within GFF2745 at 148.356 kb on - strand, within GFF2745 at 148.382 kb on + strand at 148.382 kb on + strand at 148.411 kb on + strand at 148.411 kb on + strand at 148.411 kb on + strand at 148.412 kb on - strand at 148.412 kb on - strand at 148.443 kb on + strand at 148.443 kb on + strand at 148.444 kb on - strand at 148.444 kb on - strand at 148.448 kb on - strand at 148.448 kb on - strand at 148.448 kb on - strand at 148.518 kb on + strand at 148.519 kb on - strand at 148.564 kb on + strand at 148.609 kb on + strand at 148.618 kb on + strand at 148.618 kb on + strand at 148.618 kb on + strand at 148.635 kb on + strand at 148.641 kb on + strand at 148.966 kb on + strand, within GFF2746 at 148.967 kb on - strand, within GFF2746 at 149.053 kb on + strand, within GFF2746 at 149.076 kb on + strand, within GFF2746 at 149.109 kb on - strand, within GFF2746 at 149.117 kb on + strand, within GFF2746 at 149.117 kb on + strand, within GFF2746 at 149.191 kb on + strand, within GFF2746 at 149.191 kb on + strand, within GFF2746 at 149.191 kb on + strand, within GFF2746 at 149.191 kb on + strand, within GFF2746 at 149.192 kb on - strand, within GFF2746 at 149.197 kb on + strand, within GFF2746 at 149.197 kb on + strand, within GFF2746 at 149.197 kb on + strand, within GFF2746 at 149.197 kb on + strand, within GFF2746 at 149.198 kb on - strand, within GFF2746 at 149.294 kb on + strand, within GFF2746 at 149.295 kb on - strand, within GFF2746 at 149.296 kb on + strand, within GFF2746 at 149.296 kb on + strand, within GFF2746 at 149.460 kb on + strand, within GFF2746 at 149.493 kb on + strand, within GFF2746 at 149.517 kb on + strand, within GFF2746 at 149.517 kb on + strand, within GFF2746 at 149.517 kb on + strand, within GFF2746 at 149.554 kb on + strand, within GFF2746 at 149.555 kb on - strand, within GFF2746 at 149.601 kb on + strand at 149.673 kb on + strand at 149.673 kb on + strand at 149.673 kb on + strand at 149.674 kb on - strand at 149.700 kb on - strand at 149.725 kb on + strand at 149.745 kb on + strand at 149.910 kb on + strand, within GFF2747 at 150.031 kb on + strand, within GFF2747 at 150.415 kb on + strand, within GFF2747 at 150.426 kb on + strand, within GFF2747 at 150.546 kb on + strand, within GFF2747
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 147,696 + -0.7 147,696 + -1.0 147,696 + +0.8 147,696 + +0.4 147,696 + +0.8 147,697 - -0.2 147,697 - -1.0 147,697 - -1.0 147,697 - -0.3 147,830 + GFF2745 0.24 +0.4 147,830 + GFF2745 0.24 +0.8 147,830 + GFF2745 0.24 -1.8 147,831 - GFF2745 0.24 -0.1 147,831 - GFF2745 0.24 +0.3 147,934 + GFF2745 0.37 -0.1 147,934 + GFF2745 0.37 -1.0 147,934 + GFF2745 0.37 +0.4 147,935 - GFF2745 0.37 +0.2 147,935 - GFF2745 0.37 -0.3 148,059 + GFF2745 0.52 -0.2 148,344 + GFF2745 0.87 +0.0 148,344 + GFF2745 0.87 -2.9 148,355 + GFF2745 0.89 -0.1 148,356 - GFF2745 0.89 -0.1 148,382 + -1.0 148,382 + -0.2 148,411 + -0.4 148,411 + -0.3 148,411 + +0.4 148,412 - +0.6 148,412 - -0.2 148,443 + +1.4 148,443 + +0.4 148,444 - +0.3 148,444 - -1.3 148,448 - +0.0 148,448 - +0.0 148,448 - -1.0 148,518 + -0.1 148,519 - +1.0 148,564 + -1.0 148,609 + -0.6 148,618 + -2.0 148,618 + -1.0 148,618 + -2.6 148,635 + -0.3 148,641 + -1.0 148,966 + GFF2746 0.30 +0.3 148,967 - GFF2746 0.30 -1.8 149,053 + GFF2746 0.39 -1.6 149,076 + GFF2746 0.41 -1.0 149,109 - GFF2746 0.45 -1.0 149,117 + GFF2746 0.45 -3.2 149,117 + GFF2746 0.45 -0.6 149,191 + GFF2746 0.53 -1.6 149,191 + GFF2746 0.53 -1.0 149,191 + GFF2746 0.53 -1.0 149,191 + GFF2746 0.53 -3.1 149,192 - GFF2746 0.53 -1.8 149,197 + GFF2746 0.54 -2.8 149,197 + GFF2746 0.54 -1.3 149,197 + GFF2746 0.54 +0.0 149,197 + GFF2746 0.54 -1.3 149,198 - GFF2746 0.54 -1.0 149,294 + GFF2746 0.63 -1.0 149,295 - GFF2746 0.63 -2.0 149,296 + GFF2746 0.63 -1.0 149,296 + GFF2746 0.63 -1.0 149,460 + GFF2746 0.80 -1.0 149,493 + GFF2746 0.83 -1.0 149,517 + GFF2746 0.86 -1.0 149,517 + GFF2746 0.86 -1.0 149,517 + GFF2746 0.86 -2.3 149,554 + GFF2746 0.89 -0.8 149,555 - GFF2746 0.89 -1.3 149,601 + -1.8 149,673 + -1.6 149,673 + -2.3 149,673 + -1.8 149,674 - -1.0 149,700 - -1.3 149,725 + -1.0 149,745 + -1.6 149,910 + GFF2747 0.23 -1.0 150,031 + GFF2747 0.34 -1.3 150,415 + GFF2747 0.72 -1.3 150,426 + GFF2747 0.73 -1.0 150,546 + GFF2747 0.84 -1.0
Or see this region's nucleotide sequence