Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2569 and GFF2570 overlap by 1 nucleotides GFF2570 and GFF2571 are separated by 44 nucleotides GFF2571 and GFF2572 are separated by 3 nucleotides GFF2572 and GFF2573 are separated by 99 nucleotides
GFF2569 - hypothetical protein, at 271,147 to 272,274
GFF2569
GFF2570 - Peptidyl-prolyl cis-trans isomerase B, at 272,274 to 272,837
GFF2570
GFF2571 - Peptidyl-prolyl cis-trans isomerase cyp18, at 272,882 to 273,376
GFF2571
GFF2572 - UDP-2,3-diacylglucosamine hydrolase, at 273,380 to 274,126
GFF2572
GFF2573 - Transcription antitermination protein NusB, at 274,226 to 274,696
GFF2573
Position (kb) 272
273
274 Strain fitness (log2 ratio) -2
-1
0
1 at 271.999 kb on + strand, within GFF2569 at 271.999 kb on + strand, within GFF2569 at 271.999 kb on + strand, within GFF2569 at 271.999 kb on + strand, within GFF2569 at 272.000 kb on - strand, within GFF2569 at 272.011 kb on + strand, within GFF2569 at 272.062 kb on + strand, within GFF2569 at 272.062 kb on + strand, within GFF2569 at 272.063 kb on - strand, within GFF2569 at 272.151 kb on + strand, within GFF2569 at 272.151 kb on + strand, within GFF2569 at 272.179 kb on + strand at 272.179 kb on + strand at 272.180 kb on - strand at 272.180 kb on - strand at 272.180 kb on - strand at 272.180 kb on - strand at 272.181 kb on + strand at 272.181 kb on + strand at 272.181 kb on + strand at 272.221 kb on + strand at 272.272 kb on + strand at 272.272 kb on + strand at 272.293 kb on + strand at 272.296 kb on + strand at 272.296 kb on + strand at 272.300 kb on + strand at 272.300 kb on + strand at 272.300 kb on + strand at 272.300 kb on + strand at 272.300 kb on + strand at 272.300 kb on + strand at 272.300 kb on + strand at 272.300 kb on + strand at 272.300 kb on + strand at 272.375 kb on + strand, within GFF2570 at 272.380 kb on + strand, within GFF2570 at 272.430 kb on + strand, within GFF2570 at 272.430 kb on + strand, within GFF2570 at 272.430 kb on + strand, within GFF2570 at 272.430 kb on + strand, within GFF2570 at 272.430 kb on + strand, within GFF2570 at 272.456 kb on + strand, within GFF2570 at 272.456 kb on + strand, within GFF2570 at 272.603 kb on + strand, within GFF2570 at 272.603 kb on + strand, within GFF2570 at 272.615 kb on + strand, within GFF2570 at 272.615 kb on + strand, within GFF2570 at 272.615 kb on + strand, within GFF2570 at 272.615 kb on + strand, within GFF2570 at 272.615 kb on + strand, within GFF2570 at 272.615 kb on + strand, within GFF2570 at 272.615 kb on + strand, within GFF2570 at 272.654 kb on + strand, within GFF2570 at 272.670 kb on + strand, within GFF2570 at 272.758 kb on + strand, within GFF2570 at 272.758 kb on + strand, within GFF2570 at 272.768 kb on + strand, within GFF2570 at 272.801 kb on + strand at 272.827 kb on + strand at 272.835 kb on + strand at 272.835 kb on + strand at 272.835 kb on + strand at 272.835 kb on + strand at 272.845 kb on + strand at 272.987 kb on + strand, within GFF2571 at 272.987 kb on + strand, within GFF2571 at 272.987 kb on + strand, within GFF2571 at 273.118 kb on + strand, within GFF2571 at 273.118 kb on + strand, within GFF2571 at 273.118 kb on + strand, within GFF2571 at 273.122 kb on + strand, within GFF2571 at 273.142 kb on + strand, within GFF2571 at 273.142 kb on + strand, within GFF2571 at 273.142 kb on + strand, within GFF2571 at 273.142 kb on + strand, within GFF2571 at 273.142 kb on + strand, within GFF2571 at 274.080 kb on + strand at 274.080 kb on + strand at 274.081 kb on - strand at 274.081 kb on - strand at 274.110 kb on + strand at 274.125 kb on - strand at 274.131 kb on + strand at 274.132 kb on - strand at 274.145 kb on + strand at 274.146 kb on - strand at 274.146 kb on - strand at 274.146 kb on - strand at 274.146 kb on - strand at 274.178 kb on + strand at 274.178 kb on + strand at 274.179 kb on - strand at 274.179 kb on - strand at 274.194 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 271,999 + GFF2569 0.76 +1.0 271,999 + GFF2569 0.76 -1.5 271,999 + GFF2569 0.76 -1.3 271,999 + GFF2569 0.76 -1.0 272,000 - GFF2569 0.76 -1.0 272,011 + GFF2569 0.77 -2.0 272,062 + GFF2569 0.81 -1.0 272,062 + GFF2569 0.81 -1.5 272,063 - GFF2569 0.81 -2.1 272,151 + GFF2569 0.89 +0.0 272,151 + GFF2569 0.89 -1.0 272,179 + -2.1 272,179 + -1.1 272,180 - -1.5 272,180 - -1.0 272,180 - -1.5 272,180 - -0.8 272,181 + -1.4 272,181 + -1.0 272,181 + -0.3 272,221 + -1.0 272,272 + -0.8 272,272 + +1.0 272,293 + -0.7 272,296 + +1.3 272,296 + -0.2 272,300 + -1.0 272,300 + -0.2 272,300 + -0.4 272,300 + -1.0 272,300 + -0.2 272,300 + -1.0 272,300 + -2.4 272,300 + -1.8 272,300 + -0.5 272,375 + GFF2570 0.18 -1.4 272,380 + GFF2570 0.19 -1.1 272,430 + GFF2570 0.28 -0.9 272,430 + GFF2570 0.28 +0.6 272,430 + GFF2570 0.28 -0.5 272,430 + GFF2570 0.28 -0.8 272,430 + GFF2570 0.28 -1.3 272,456 + GFF2570 0.32 -0.9 272,456 + GFF2570 0.32 -1.5 272,603 + GFF2570 0.58 -0.9 272,603 + GFF2570 0.58 -0.2 272,615 + GFF2570 0.60 -0.1 272,615 + GFF2570 0.60 -0.1 272,615 + GFF2570 0.60 -1.8 272,615 + GFF2570 0.60 -0.2 272,615 + GFF2570 0.60 -0.8 272,615 + GFF2570 0.60 +0.5 272,615 + GFF2570 0.60 -0.5 272,654 + GFF2570 0.67 -1.5 272,670 + GFF2570 0.70 -1.3 272,758 + GFF2570 0.86 +0.7 272,758 + GFF2570 0.86 -0.3 272,768 + GFF2570 0.88 +0.7 272,801 + -1.0 272,827 + -0.5 272,835 + -0.3 272,835 + -0.4 272,835 + +0.1 272,835 + -1.1 272,845 + -1.9 272,987 + GFF2571 0.21 -0.8 272,987 + GFF2571 0.21 +0.0 272,987 + GFF2571 0.21 -1.5 273,118 + GFF2571 0.48 +0.0 273,118 + GFF2571 0.48 -0.9 273,118 + GFF2571 0.48 -0.4 273,122 + GFF2571 0.48 -0.4 273,142 + GFF2571 0.53 -1.0 273,142 + GFF2571 0.53 -1.2 273,142 + GFF2571 0.53 -1.0 273,142 + GFF2571 0.53 +0.8 273,142 + GFF2571 0.53 -2.1 274,080 + +0.5 274,080 + -2.0 274,081 - -0.8 274,081 - +0.9 274,110 + -0.5 274,125 - -0.7 274,131 + -1.1 274,132 - -0.4 274,145 + -1.1 274,146 - +0.6 274,146 - -1.0 274,146 - -1.2 274,146 - +0.5 274,178 + -0.1 274,178 + +0.9 274,179 - -0.9 274,179 - -0.5 274,194 + -2.4
Or see this region's nucleotide sequence