Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2455 and GFF2456 are separated by 257 nucleotides GFF2456 and GFF2457 are separated by 330 nucleotides GFF2457 and GFF2458 overlap by 4 nucleotides
GFF2455 - hypothetical protein, at 156,310 to 157,569
GFF2455
GFF2456 - hypothetical protein, at 157,827 to 158,210
GFF2456
GFF2457 - Transcriptional regulator MraZ, at 158,541 to 158,987
GFF2457
GFF2458 - Ribosomal RNA small subunit methyltransferase H, at 158,984 to 159,973
GFF2458
Position (kb) 158
159 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 157.597 kb on + strand at 157.597 kb on + strand at 157.604 kb on + strand at 157.605 kb on - strand at 157.605 kb on - strand at 157.610 kb on - strand at 157.617 kb on + strand at 157.618 kb on - strand at 157.621 kb on + strand at 157.621 kb on + strand at 157.621 kb on + strand at 157.621 kb on + strand at 157.621 kb on + strand at 157.621 kb on + strand at 157.622 kb on - strand at 157.622 kb on - strand at 157.622 kb on - strand at 157.625 kb on + strand at 157.625 kb on + strand at 157.625 kb on + strand at 157.625 kb on + strand at 157.626 kb on - strand at 157.626 kb on - strand at 157.626 kb on - strand at 157.626 kb on - strand at 157.626 kb on - strand at 157.626 kb on - strand at 157.626 kb on - strand at 157.642 kb on + strand at 157.642 kb on + strand at 157.643 kb on - strand at 157.643 kb on - strand at 157.643 kb on - strand at 157.644 kb on + strand at 157.654 kb on - strand at 157.660 kb on + strand at 157.660 kb on + strand at 157.660 kb on + strand at 157.660 kb on + strand at 157.661 kb on - strand at 157.661 kb on - strand at 157.661 kb on - strand at 157.661 kb on - strand at 157.676 kb on + strand at 157.735 kb on - strand at 157.736 kb on + strand at 157.736 kb on + strand at 157.737 kb on - strand at 157.737 kb on - strand at 157.745 kb on - strand at 157.751 kb on - strand at 157.784 kb on + strand at 157.784 kb on + strand at 157.785 kb on - strand at 157.789 kb on + strand at 157.790 kb on - strand at 157.793 kb on + strand at 157.793 kb on + strand at 157.794 kb on - strand at 157.794 kb on - strand at 157.794 kb on - strand at 157.814 kb on + strand at 157.815 kb on - strand at 157.835 kb on - strand at 157.885 kb on - strand, within GFF2456 at 157.885 kb on - strand, within GFF2456 at 157.936 kb on - strand, within GFF2456 at 157.938 kb on + strand, within GFF2456 at 157.939 kb on - strand, within GFF2456 at 157.939 kb on - strand, within GFF2456 at 157.939 kb on - strand, within GFF2456 at 157.939 kb on - strand, within GFF2456 at 157.973 kb on - strand, within GFF2456 at 158.015 kb on + strand, within GFF2456 at 158.016 kb on - strand, within GFF2456 at 158.017 kb on + strand, within GFF2456 at 158.017 kb on + strand, within GFF2456 at 158.017 kb on + strand, within GFF2456 at 158.017 kb on + strand, within GFF2456 at 158.018 kb on - strand, within GFF2456 at 158.018 kb on - strand, within GFF2456 at 158.105 kb on + strand, within GFF2456 at 158.129 kb on - strand, within GFF2456 at 158.141 kb on + strand, within GFF2456 at 158.141 kb on + strand, within GFF2456 at 158.141 kb on + strand, within GFF2456 at 158.142 kb on - strand, within GFF2456 at 158.142 kb on - strand, within GFF2456 at 158.142 kb on - strand, within GFF2456 at 158.142 kb on - strand, within GFF2456 at 158.142 kb on - strand, within GFF2456 at 158.142 kb on - strand, within GFF2456 at 158.221 kb on + strand at 158.221 kb on + strand at 158.221 kb on + strand at 158.221 kb on + strand at 158.221 kb on + strand at 158.221 kb on + strand at 158.221 kb on + strand at 158.221 kb on + strand at 158.221 kb on + strand at 158.221 kb on + strand at 158.221 kb on + strand at 158.221 kb on + strand at 158.221 kb on + strand at 158.221 kb on + strand at 158.222 kb on - strand at 158.222 kb on - strand at 158.222 kb on - strand at 158.222 kb on - strand at 158.222 kb on - strand at 158.222 kb on - strand at 158.247 kb on + strand at 158.248 kb on - strand at 158.248 kb on - strand at 158.260 kb on + strand at 158.297 kb on - strand at 158.499 kb on + strand at 158.587 kb on + strand, within GFF2457 at 158.735 kb on + strand, within GFF2457 at 158.735 kb on + strand, within GFF2457 at 158.753 kb on + strand, within GFF2457 at 158.827 kb on + strand, within GFF2457 at 158.827 kb on + strand, within GFF2457 at 158.879 kb on + strand, within GFF2457 at 158.879 kb on + strand, within GFF2457 at 159.113 kb on + strand, within GFF2458 at 159.113 kb on + strand, within GFF2458 at 159.113 kb on + strand, within GFF2458
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 157,597 + +0.0 157,597 + -0.2 157,604 + -1.4 157,605 - -0.5 157,605 - +1.4 157,610 - -0.7 157,617 + -1.0 157,618 - +0.6 157,621 + -1.0 157,621 + +0.5 157,621 + -0.5 157,621 + +0.6 157,621 + -0.5 157,621 + -1.4 157,622 - -2.1 157,622 - +0.0 157,622 - +1.0 157,625 + -1.3 157,625 + +0.3 157,625 + -0.1 157,625 + -0.4 157,626 - -1.0 157,626 - -1.3 157,626 - -1.5 157,626 - -0.8 157,626 - -0.8 157,626 - -0.8 157,626 - -1.0 157,642 + -0.5 157,642 + +0.0 157,643 - -0.4 157,643 - -1.0 157,643 - +0.0 157,644 + +1.6 157,654 - +0.6 157,660 + -0.8 157,660 + -0.5 157,660 + -0.7 157,660 + -0.3 157,661 - +1.0 157,661 - -0.8 157,661 - -0.2 157,661 - +0.0 157,676 + -2.1 157,735 - -0.2 157,736 + -0.1 157,736 + -1.3 157,737 - -1.0 157,737 - +0.0 157,745 - -2.1 157,751 - -3.3 157,784 + +0.2 157,784 + +0.0 157,785 - +0.2 157,789 + +0.5 157,790 - -0.7 157,793 + +0.0 157,793 + -0.2 157,794 - -1.5 157,794 - -1.6 157,794 - -1.5 157,814 + -0.6 157,815 - -0.4 157,835 - -0.5 157,885 - GFF2456 0.15 -0.5 157,885 - GFF2456 0.15 +0.0 157,936 - GFF2456 0.28 -1.2 157,938 + GFF2456 0.29 +1.0 157,939 - GFF2456 0.29 +0.0 157,939 - GFF2456 0.29 +0.4 157,939 - GFF2456 0.29 -0.0 157,939 - GFF2456 0.29 -0.9 157,973 - GFF2456 0.38 -0.2 158,015 + GFF2456 0.49 -0.5 158,016 - GFF2456 0.49 +0.2 158,017 + GFF2456 0.49 -0.5 158,017 + GFF2456 0.49 -0.3 158,017 + GFF2456 0.49 +0.0 158,017 + GFF2456 0.49 +0.6 158,018 - GFF2456 0.50 -0.2 158,018 - GFF2456 0.50 -0.5 158,105 + GFF2456 0.72 -1.2 158,129 - GFF2456 0.79 -0.5 158,141 + GFF2456 0.82 -0.4 158,141 + GFF2456 0.82 -0.8 158,141 + GFF2456 0.82 -1.0 158,142 - GFF2456 0.82 -1.5 158,142 - GFF2456 0.82 +0.0 158,142 - GFF2456 0.82 -0.1 158,142 - GFF2456 0.82 -0.5 158,142 - GFF2456 0.82 +0.0 158,142 - GFF2456 0.82 -0.8 158,221 + +0.0 158,221 + +0.0 158,221 + -0.1 158,221 + +0.4 158,221 + -1.5 158,221 + +0.5 158,221 + -0.5 158,221 + -1.3 158,221 + +0.4 158,221 + -0.8 158,221 + +0.0 158,221 + -1.0 158,221 + -0.1 158,221 + -0.0 158,222 - +0.6 158,222 - -0.9 158,222 - -0.1 158,222 - +0.5 158,222 - -0.1 158,222 - -0.1 158,247 + -2.3 158,248 - -0.5 158,248 - -0.1 158,260 + -0.4 158,297 - -0.5 158,499 + -1.0 158,587 + GFF2457 0.10 -1.3 158,735 + GFF2457 0.43 -1.3 158,735 + GFF2457 0.43 +0.2 158,753 + GFF2457 0.47 -0.3 158,827 + GFF2457 0.64 -1.5 158,827 + GFF2457 0.64 -1.1 158,879 + GFF2457 0.76 -1.3 158,879 + GFF2457 0.76 +0.5 159,113 + GFF2458 0.13 -0.4 159,113 + GFF2458 0.13 -0.2 159,113 + GFF2458 0.13 -0.8
Or see this region's nucleotide sequence