Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2282 and GFF2283 are separated by 106 nucleotides GFF2283 and GFF2284 are separated by 9 nucleotides GFF2284 and GFF2285 are separated by 153 nucleotides
GFF2282 - Cyclic pyranopterin monophosphate synthase, at 119 to 610
GFF2282
GFF2283 - Beta-barrel assembly-enhancing protease, at 717 to 2,297
GFF2283
GFF2284 - hypothetical protein, at 2,307 to 3,113
GFF2284
GFF2285 - Alkyl hydroperoxide reductase C, at 3,267 to 3,830
GFF2285
Position (kb) 0
1
2
3 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 0.069 kb on + strand at 0.069 kb on + strand at 0.089 kb on + strand at 0.112 kb on - strand at 0.115 kb on + strand at 0.115 kb on + strand at 0.116 kb on - strand at 0.116 kb on - strand at 0.116 kb on - strand at 0.121 kb on - strand at 0.182 kb on + strand, within GFF2282 at 0.182 kb on + strand, within GFF2282 at 0.182 kb on + strand, within GFF2282 at 0.182 kb on + strand, within GFF2282 at 0.182 kb on + strand, within GFF2282 at 0.182 kb on + strand, within GFF2282 at 0.182 kb on + strand, within GFF2282 at 0.183 kb on - strand, within GFF2282 at 0.183 kb on - strand, within GFF2282 at 0.183 kb on - strand, within GFF2282 at 0.183 kb on - strand, within GFF2282 at 0.183 kb on - strand, within GFF2282 at 0.183 kb on - strand, within GFF2282 at 0.183 kb on - strand, within GFF2282 at 0.183 kb on - strand, within GFF2282 at 0.183 kb on - strand, within GFF2282 at 0.183 kb on - strand, within GFF2282 at 0.183 kb on - strand, within GFF2282 at 0.183 kb on - strand, within GFF2282 at 0.183 kb on - strand, within GFF2282 at 0.183 kb on - strand, within GFF2282 at 0.190 kb on + strand, within GFF2282 at 0.209 kb on - strand, within GFF2282 at 0.209 kb on - strand, within GFF2282 at 0.284 kb on - strand, within GFF2282 at 0.307 kb on + strand, within GFF2282 at 0.307 kb on + strand, within GFF2282 at 0.307 kb on + strand, within GFF2282 at 0.307 kb on + strand, within GFF2282 at 0.307 kb on + strand, within GFF2282 at 0.307 kb on + strand, within GFF2282 at 0.307 kb on + strand, within GFF2282 at 0.308 kb on - strand, within GFF2282 at 0.308 kb on - strand, within GFF2282 at 0.308 kb on - strand, within GFF2282 at 0.308 kb on - strand, within GFF2282 at 0.308 kb on - strand, within GFF2282 at 0.308 kb on - strand, within GFF2282 at 0.308 kb on - strand, within GFF2282 at 0.308 kb on - strand, within GFF2282 at 0.308 kb on - strand, within GFF2282 at 0.308 kb on - strand, within GFF2282 at 0.308 kb on - strand, within GFF2282 at 0.308 kb on - strand, within GFF2282 at 0.308 kb on - strand, within GFF2282 at 0.308 kb on - strand, within GFF2282 at 0.308 kb on - strand, within GFF2282 at 0.308 kb on - strand, within GFF2282 at 0.310 kb on + strand, within GFF2282 at 0.310 kb on + strand, within GFF2282 at 0.311 kb on - strand, within GFF2282 at 0.311 kb on - strand, within GFF2282 at 0.347 kb on + strand, within GFF2282 at 0.348 kb on - strand, within GFF2282 at 0.348 kb on - strand, within GFF2282 at 0.356 kb on + strand, within GFF2282 at 0.556 kb on + strand, within GFF2282 at 0.556 kb on + strand, within GFF2282 at 0.557 kb on - strand, within GFF2282 at 0.557 kb on - strand, within GFF2282 at 0.577 kb on + strand at 0.610 kb on + strand at 0.610 kb on + strand at 0.610 kb on + strand at 0.611 kb on - strand at 0.611 kb on - strand at 0.611 kb on - strand at 0.611 kb on - strand at 0.611 kb on - strand at 0.611 kb on - strand at 0.611 kb on - strand at 0.611 kb on - strand at 0.611 kb on - strand at 0.687 kb on + strand at 0.726 kb on - strand at 0.743 kb on - strand at 0.743 kb on - strand at 0.766 kb on + strand at 0.766 kb on + strand at 0.766 kb on + strand at 0.766 kb on + strand at 0.766 kb on + strand at 0.767 kb on - strand at 0.767 kb on - strand at 0.767 kb on - strand at 1.123 kb on + strand, within GFF2283 at 1.123 kb on + strand, within GFF2283 at 1.187 kb on - strand, within GFF2283 at 1.271 kb on + strand, within GFF2283 at 1.272 kb on - strand, within GFF2283 at 1.295 kb on + strand, within GFF2283 at 1.295 kb on + strand, within GFF2283 at 1.296 kb on - strand, within GFF2283 at 1.296 kb on - strand, within GFF2283 at 1.544 kb on + strand, within GFF2283 at 1.554 kb on + strand, within GFF2283 at 1.596 kb on - strand, within GFF2283 at 1.597 kb on + strand, within GFF2283 at 1.597 kb on + strand, within GFF2283 at 1.598 kb on - strand, within GFF2283 at 1.609 kb on + strand, within GFF2283 at 1.623 kb on + strand, within GFF2283 at 1.625 kb on + strand, within GFF2283 at 1.625 kb on + strand, within GFF2283 at 1.626 kb on - strand, within GFF2283 at 1.626 kb on - strand, within GFF2283 at 1.705 kb on + strand, within GFF2283 at 1.705 kb on + strand, within GFF2283 at 1.705 kb on + strand, within GFF2283 at 1.706 kb on - strand, within GFF2283 at 1.725 kb on - strand, within GFF2283 at 1.765 kb on - strand, within GFF2283 at 1.984 kb on + strand, within GFF2283 at 2.139 kb on + strand, within GFF2283 at 2.139 kb on + strand, within GFF2283 at 2.140 kb on - strand at 2.140 kb on - strand at 2.140 kb on - strand at 2.140 kb on - strand at 2.140 kb on - strand at 2.140 kb on - strand at 2.214 kb on + strand at 2.214 kb on + strand at 2.215 kb on - strand at 2.295 kb on + strand at 2.353 kb on + strand at 2.564 kb on + strand, within GFF2284 at 2.620 kb on + strand, within GFF2284 at 2.620 kb on + strand, within GFF2284 at 2.632 kb on + strand, within GFF2284 at 2.714 kb on + strand, within GFF2284 at 2.715 kb on - strand, within GFF2284 at 2.715 kb on - strand, within GFF2284 at 2.715 kb on - strand, within GFF2284 at 2.861 kb on + strand, within GFF2284 at 2.862 kb on - strand, within GFF2284 at 2.880 kb on - strand, within GFF2284 at 2.888 kb on + strand, within GFF2284 at 2.889 kb on - strand, within GFF2284 at 2.911 kb on + strand, within GFF2284 at 2.968 kb on + strand, within GFF2284 at 2.968 kb on + strand, within GFF2284 at 2.968 kb on + strand, within GFF2284 at 2.969 kb on - strand, within GFF2284 at 2.969 kb on - strand, within GFF2284 at 3.007 kb on - strand, within GFF2284 at 3.018 kb on + strand, within GFF2284 at 3.018 kb on + strand, within GFF2284 at 3.018 kb on + strand, within GFF2284 at 3.018 kb on + strand, within GFF2284 at 3.018 kb on + strand, within GFF2284 at 3.018 kb on + strand, within GFF2284 at 3.019 kb on - strand, within GFF2284 at 3.019 kb on - strand, within GFF2284 at 3.020 kb on + strand, within GFF2284 at 3.020 kb on + strand, within GFF2284 at 3.022 kb on + strand, within GFF2284 at 3.022 kb on + strand, within GFF2284 at 3.022 kb on + strand, within GFF2284 at 3.022 kb on + strand, within GFF2284 at 3.022 kb on + strand, within GFF2284 at 3.022 kb on + strand, within GFF2284 at 3.022 kb on + strand, within GFF2284 at 3.022 kb on + strand, within GFF2284 at 3.022 kb on + strand, within GFF2284 at 3.022 kb on + strand, within GFF2284 at 3.022 kb on - strand, within GFF2284 at 3.023 kb on - strand, within GFF2284 at 3.023 kb on - strand, within GFF2284 at 3.023 kb on - strand, within GFF2284 at 3.050 kb on + strand at 3.068 kb on + strand at 3.178 kb on + strand at 3.178 kb on + strand at 3.178 kb on + strand at 3.179 kb on - strand at 3.212 kb on + strand at 3.212 kb on + strand at 3.212 kb on + strand at 3.213 kb on - strand at 3.213 kb on - strand at 3.234 kb on + strand at 3.234 kb on + strand at 3.235 kb on - strand at 3.246 kb on + strand at 3.246 kb on + strand at 3.246 kb on + strand at 3.253 kb on + strand at 3.254 kb on - strand at 3.264 kb on + strand at 3.264 kb on + strand at 3.264 kb on + strand at 3.264 kb on + strand at 3.264 kb on + strand at 3.264 kb on + strand at 3.264 kb on + strand at 3.264 kb on + strand at 3.264 kb on + strand at 3.264 kb on + strand at 3.264 kb on + strand at 3.265 kb on - strand at 3.265 kb on - strand at 3.265 kb on - strand at 3.265 kb on - strand at 3.265 kb on - strand at 3.265 kb on - strand at 3.265 kb on - strand at 3.289 kb on + strand at 3.289 kb on + strand at 3.289 kb on + strand at 3.289 kb on + strand at 3.289 kb on + strand at 3.289 kb on + strand at 3.289 kb on + strand at 3.289 kb on + strand at 3.289 kb on + strand at 3.289 kb on + strand at 3.289 kb on + strand at 3.289 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 69 + +0.0 69 + +0.3 89 + -1.1 112 - -1.0 115 + -0.0 115 + +0.4 116 - -0.6 116 - -1.3 116 - -0.9 121 - -0.8 182 + GFF2282 0.13 -1.8 182 + GFF2282 0.13 -0.3 182 + GFF2282 0.13 +0.6 182 + GFF2282 0.13 -0.9 182 + GFF2282 0.13 -0.5 182 + GFF2282 0.13 -0.3 182 + GFF2282 0.13 -0.8 183 - GFF2282 0.13 -0.8 183 - GFF2282 0.13 -2.0 183 - GFF2282 0.13 -1.3 183 - GFF2282 0.13 -1.0 183 - GFF2282 0.13 -1.0 183 - GFF2282 0.13 -2.5 183 - GFF2282 0.13 -0.4 183 - GFF2282 0.13 -0.8 183 - GFF2282 0.13 -0.5 183 - GFF2282 0.13 -1.0 183 - GFF2282 0.13 -0.7 183 - GFF2282 0.13 +0.6 183 - GFF2282 0.13 +0.6 183 - GFF2282 0.13 -2.5 190 + GFF2282 0.14 -0.7 209 - GFF2282 0.18 -1.0 209 - GFF2282 0.18 -0.8 284 - GFF2282 0.34 -0.5 307 + GFF2282 0.38 +0.3 307 + GFF2282 0.38 -1.5 307 + GFF2282 0.38 +0.4 307 + GFF2282 0.38 -1.5 307 + GFF2282 0.38 +0.0 307 + GFF2282 0.38 +1.0 307 + GFF2282 0.38 -0.3 308 - GFF2282 0.38 -1.1 308 - GFF2282 0.38 -1.3 308 - GFF2282 0.38 -1.0 308 - GFF2282 0.38 -0.8 308 - GFF2282 0.38 +0.0 308 - GFF2282 0.38 +0.4 308 - GFF2282 0.38 -0.1 308 - GFF2282 0.38 -1.7 308 - GFF2282 0.38 -0.2 308 - GFF2282 0.38 -1.3 308 - GFF2282 0.38 -1.0 308 - GFF2282 0.38 -0.5 308 - GFF2282 0.38 -1.0 308 - GFF2282 0.38 -1.8 308 - GFF2282 0.38 -1.0 308 - GFF2282 0.38 -1.0 310 + GFF2282 0.39 -0.8 310 + GFF2282 0.39 -1.9 311 - GFF2282 0.39 -0.6 311 - GFF2282 0.39 -0.3 347 + GFF2282 0.46 -1.3 348 - GFF2282 0.47 -1.3 348 - GFF2282 0.47 -1.8 356 + GFF2282 0.48 -2.4 556 + GFF2282 0.89 -1.0 556 + GFF2282 0.89 +0.3 557 - GFF2282 0.89 -2.0 557 - GFF2282 0.89 -0.2 577 + -1.3 610 + -1.1 610 + +0.1 610 + -2.0 611 - -1.0 611 - -1.9 611 - -2.3 611 - -1.0 611 - -1.0 611 - -0.6 611 - -1.3 611 - -0.7 611 - -1.3 687 + +0.0 726 - +0.0 743 - -1.8 743 - -0.4 766 + +0.3 766 + -1.5 766 + -0.5 766 + -1.5 766 + -0.8 767 - +0.0 767 - -0.5 767 - -1.8 1,123 + GFF2283 0.26 -1.3 1,123 + GFF2283 0.26 -1.3 1,187 - GFF2283 0.30 -1.0 1,271 + GFF2283 0.35 -1.0 1,272 - GFF2283 0.35 -1.0 1,295 + GFF2283 0.37 -1.0 1,295 + GFF2283 0.37 +0.3 1,296 - GFF2283 0.37 +0.0 1,296 - GFF2283 0.37 +0.0 1,544 + GFF2283 0.52 -0.5 1,554 + GFF2283 0.53 -1.3 1,596 - GFF2283 0.56 -1.0 1,597 + GFF2283 0.56 +0.0 1,597 + GFF2283 0.56 -0.3 1,598 - GFF2283 0.56 +0.0 1,609 + GFF2283 0.56 +0.0 1,623 + GFF2283 0.57 -0.3 1,625 + GFF2283 0.57 +0.0 1,625 + GFF2283 0.57 -1.0 1,626 - GFF2283 0.57 -0.5 1,626 - GFF2283 0.57 -0.3 1,705 + GFF2283 0.62 -1.3 1,705 + GFF2283 0.62 +0.0 1,705 + GFF2283 0.62 -0.5 1,706 - GFF2283 0.63 -1.3 1,725 - GFF2283 0.64 -0.5 1,765 - GFF2283 0.66 -1.3 1,984 + GFF2283 0.80 -2.0 2,139 + GFF2283 0.90 -1.0 2,139 + GFF2283 0.90 -1.8 2,140 - -1.5 2,140 - -1.0 2,140 - -1.0 2,140 - -1.0 2,140 - +0.0 2,140 - -2.4 2,214 + -2.4 2,214 + -1.8 2,215 - -1.3 2,295 + -0.2 2,353 + -1.0 2,564 + GFF2284 0.32 -0.8 2,620 + GFF2284 0.39 -0.3 2,620 + GFF2284 0.39 +0.5 2,632 + GFF2284 0.40 -0.4 2,714 + GFF2284 0.50 +1.0 2,715 - GFF2284 0.51 -0.7 2,715 - GFF2284 0.51 -0.1 2,715 - GFF2284 0.51 +0.0 2,861 + GFF2284 0.69 -0.3 2,862 - GFF2284 0.69 +0.3 2,880 - GFF2284 0.71 -0.4 2,888 + GFF2284 0.72 -2.4 2,889 - GFF2284 0.72 -0.2 2,911 + GFF2284 0.75 -0.4 2,968 + GFF2284 0.82 -1.5 2,968 + GFF2284 0.82 -0.3 2,968 + GFF2284 0.82 -0.4 2,969 - GFF2284 0.82 -1.0 2,969 - GFF2284 0.82 +0.3 3,007 - GFF2284 0.87 -2.1 3,018 + GFF2284 0.88 -0.2 3,018 + GFF2284 0.88 -1.0 3,018 + GFF2284 0.88 +0.2 3,018 + GFF2284 0.88 -0.5 3,018 + GFF2284 0.88 -0.5 3,018 + GFF2284 0.88 +0.3 3,019 - GFF2284 0.88 -1.2 3,019 - GFF2284 0.88 +0.4 3,020 + GFF2284 0.88 -0.5 3,020 + GFF2284 0.88 -1.0 3,022 + GFF2284 0.89 -0.4 3,022 + GFF2284 0.89 -0.8 3,022 + GFF2284 0.89 -1.0 3,022 + GFF2284 0.89 -0.5 3,022 + GFF2284 0.89 +0.2 3,022 + GFF2284 0.89 -1.0 3,022 + GFF2284 0.89 -1.5 3,022 + GFF2284 0.89 +0.0 3,022 + GFF2284 0.89 +0.0 3,022 + GFF2284 0.89 +0.2 3,022 - GFF2284 0.89 -0.8 3,023 - GFF2284 0.89 -1.0 3,023 - GFF2284 0.89 +0.4 3,023 - GFF2284 0.89 -2.2 3,050 + -2.9 3,068 + +1.0 3,178 + +1.4 3,178 + +1.7 3,178 + +0.3 3,179 - -0.3 3,212 + -0.3 3,212 + +1.3 3,212 + -0.2 3,213 - +1.0 3,213 - -1.0 3,234 + +0.1 3,234 + -0.7 3,235 - -1.1 3,246 + -1.5 3,246 + -1.0 3,246 + -1.0 3,253 + -0.3 3,254 - -0.9 3,264 + +0.1 3,264 + -0.6 3,264 + -1.3 3,264 + -0.4 3,264 + -0.5 3,264 + -0.4 3,264 + -0.8 3,264 + -1.0 3,264 + -0.5 3,264 + +0.0 3,264 + -0.3 3,265 - +0.3 3,265 - +0.2 3,265 - +0.3 3,265 - -1.3 3,265 - -1.0 3,265 - -1.0 3,265 - +0.0 3,289 + +0.4 3,289 + -1.0 3,289 + -0.4 3,289 + -1.3 3,289 + +0.0 3,289 + +0.2 3,289 + +0.6 3,289 + -2.9 3,289 + +1.0 3,289 + -0.3 3,289 + +0.0 3,289 + -0.5
Or see this region's nucleotide sequence