Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1747 and GFF1748 are separated by 24 nucleotides GFF1748 and GFF1749 are separated by 33 nucleotides GFF1749 and GFF1750 are separated by 138 nucleotides
GFF1747 - putative inner membrane transporter YedA, at 385,722 to 386,615
GFF1747
GFF1748 - putative phosphatase, at 386,640 to 387,311
GFF1748
GFF1749 - Cytochrome c biogenesis protein CcsA, at 387,345 to 388,178
GFF1749
GFF1750 - Signal recognition particle protein, at 388,317 to 389,678
GFF1750
Position (kb) 387
388
389 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 386.372 kb on + strand, within GFF1747 at 386.390 kb on + strand, within GFF1747 at 386.390 kb on + strand, within GFF1747 at 386.390 kb on + strand, within GFF1747 at 386.390 kb on + strand, within GFF1747 at 386.390 kb on + strand, within GFF1747 at 386.390 kb on + strand, within GFF1747 at 386.391 kb on - strand, within GFF1747 at 386.391 kb on - strand, within GFF1747 at 386.391 kb on - strand, within GFF1747 at 386.391 kb on - strand, within GFF1747 at 386.391 kb on - strand, within GFF1747 at 386.393 kb on + strand, within GFF1747 at 386.393 kb on + strand, within GFF1747 at 386.409 kb on + strand, within GFF1747 at 386.450 kb on + strand, within GFF1747 at 386.450 kb on + strand, within GFF1747 at 386.515 kb on + strand, within GFF1747 at 386.515 kb on + strand, within GFF1747 at 386.515 kb on + strand, within GFF1747 at 386.515 kb on + strand, within GFF1747 at 386.515 kb on + strand, within GFF1747 at 386.515 kb on + strand, within GFF1747 at 386.515 kb on + strand, within GFF1747 at 386.516 kb on - strand, within GFF1747 at 386.516 kb on - strand, within GFF1747 at 386.516 kb on - strand, within GFF1747 at 386.516 kb on - strand, within GFF1747 at 386.517 kb on + strand, within GFF1747 at 386.517 kb on + strand, within GFF1747 at 386.517 kb on + strand, within GFF1747 at 386.517 kb on + strand, within GFF1747 at 386.517 kb on + strand, within GFF1747 at 386.517 kb on + strand, within GFF1747 at 386.517 kb on + strand, within GFF1747 at 386.517 kb on + strand, within GFF1747 at 386.518 kb on - strand, within GFF1747 at 386.518 kb on - strand, within GFF1747 at 386.518 kb on - strand, within GFF1747 at 386.518 kb on - strand, within GFF1747 at 386.518 kb on - strand, within GFF1747 at 386.518 kb on - strand, within GFF1747 at 386.518 kb on - strand, within GFF1747 at 386.529 kb on + strand at 386.529 kb on + strand at 386.529 kb on + strand at 386.529 kb on + strand at 386.529 kb on + strand at 386.529 kb on + strand at 386.530 kb on - strand at 386.531 kb on + strand at 386.531 kb on + strand at 386.531 kb on + strand at 386.531 kb on + strand at 386.531 kb on + strand at 386.532 kb on - strand at 386.532 kb on - strand at 386.532 kb on - strand at 386.532 kb on - strand at 386.613 kb on + strand at 386.613 kb on + strand at 387.309 kb on + strand at 387.309 kb on + strand at 387.310 kb on - strand at 387.313 kb on + strand at 387.313 kb on - strand at 387.313 kb on - strand at 387.323 kb on + strand at 387.323 kb on + strand at 387.323 kb on + strand at 387.324 kb on - strand at 387.324 kb on - strand at 387.324 kb on - strand at 387.324 kb on - strand at 387.342 kb on + strand at 387.343 kb on - strand at 387.343 kb on - strand at 387.343 kb on - strand at 387.346 kb on + strand at 387.346 kb on + strand at 387.347 kb on - strand at 387.384 kb on + strand at 387.384 kb on + strand at 387.384 kb on + strand at 387.384 kb on + strand at 387.385 kb on - strand at 387.385 kb on - strand at 387.385 kb on - strand at 387.385 kb on - strand at 387.385 kb on - strand at 387.385 kb on - strand at 387.385 kb on - strand at 387.385 kb on - strand at 387.385 kb on - strand at 387.386 kb on + strand at 387.386 kb on + strand at 387.386 kb on + strand at 387.386 kb on + strand at 387.387 kb on - strand at 387.387 kb on - strand at 387.388 kb on + strand at 387.388 kb on + strand at 387.388 kb on + strand at 387.388 kb on + strand at 387.388 kb on + strand at 387.388 kb on + strand at 387.389 kb on - strand at 387.389 kb on - strand at 387.389 kb on - strand at 387.389 kb on - strand at 387.389 kb on - strand at 387.458 kb on + strand, within GFF1749 at 387.459 kb on - strand, within GFF1749 at 387.459 kb on - strand, within GFF1749 at 387.484 kb on + strand, within GFF1749 at 387.484 kb on + strand, within GFF1749 at 387.484 kb on + strand, within GFF1749 at 387.485 kb on - strand, within GFF1749 at 387.561 kb on + strand, within GFF1749 at 387.567 kb on - strand, within GFF1749 at 387.780 kb on - strand, within GFF1749 at 387.809 kb on - strand, within GFF1749 at 387.812 kb on - strand, within GFF1749 at 387.812 kb on - strand, within GFF1749 at 387.812 kb on - strand, within GFF1749 at 387.812 kb on - strand, within GFF1749 at 387.955 kb on + strand, within GFF1749 at 387.955 kb on + strand, within GFF1749 at 387.955 kb on + strand, within GFF1749 at 387.955 kb on + strand, within GFF1749 at 387.956 kb on - strand, within GFF1749 at 387.956 kb on - strand, within GFF1749 at 388.126 kb on + strand at 388.126 kb on + strand at 388.126 kb on + strand at 388.180 kb on - strand at 388.269 kb on + strand at 388.270 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 386,372 + GFF1747 0.73 +0.0 386,390 + GFF1747 0.75 -0.4 386,390 + GFF1747 0.75 -0.3 386,390 + GFF1747 0.75 -0.0 386,390 + GFF1747 0.75 -0.0 386,390 + GFF1747 0.75 -1.0 386,390 + GFF1747 0.75 -0.4 386,391 - GFF1747 0.75 +0.1 386,391 - GFF1747 0.75 -1.5 386,391 - GFF1747 0.75 -0.4 386,391 - GFF1747 0.75 +0.1 386,391 - GFF1747 0.75 +1.0 386,393 + GFF1747 0.75 -0.3 386,393 + GFF1747 0.75 -0.0 386,409 + GFF1747 0.77 -1.6 386,450 + GFF1747 0.81 +0.8 386,450 + GFF1747 0.81 +1.6 386,515 + GFF1747 0.89 +0.5 386,515 + GFF1747 0.89 -1.0 386,515 + GFF1747 0.89 -0.6 386,515 + GFF1747 0.89 -0.0 386,515 + GFF1747 0.89 -0.4 386,515 + GFF1747 0.89 -1.0 386,515 + GFF1747 0.89 +0.1 386,516 - GFF1747 0.89 +0.1 386,516 - GFF1747 0.89 -0.2 386,516 - GFF1747 0.89 -0.3 386,516 - GFF1747 0.89 -0.0 386,517 + GFF1747 0.89 -0.8 386,517 + GFF1747 0.89 -0.3 386,517 + GFF1747 0.89 +0.1 386,517 + GFF1747 0.89 -0.5 386,517 + GFF1747 0.89 -0.7 386,517 + GFF1747 0.89 -0.2 386,517 + GFF1747 0.89 -0.4 386,517 + GFF1747 0.89 -1.0 386,518 - GFF1747 0.89 -0.0 386,518 - GFF1747 0.89 -0.5 386,518 - GFF1747 0.89 -0.8 386,518 - GFF1747 0.89 -0.6 386,518 - GFF1747 0.89 -0.2 386,518 - GFF1747 0.89 -0.4 386,518 - GFF1747 0.89 -1.0 386,529 + -0.3 386,529 + -0.0 386,529 + -0.4 386,529 + -1.4 386,529 + -1.0 386,529 + -1.3 386,530 - +0.4 386,531 + -2.5 386,531 + -1.0 386,531 + +0.8 386,531 + +0.4 386,531 + -0.6 386,532 - -1.6 386,532 - +1.0 386,532 - -1.8 386,532 - -1.2 386,613 + -0.8 386,613 + -0.8 387,309 + +0.2 387,309 + +0.4 387,310 - +1.0 387,313 + -0.8 387,313 - -1.6 387,313 - -1.1 387,323 + -0.6 387,323 + -1.0 387,323 + +0.1 387,324 - +0.4 387,324 - -0.7 387,324 - -0.3 387,324 - -0.8 387,342 + -1.3 387,343 - -0.9 387,343 - -0.0 387,343 - -1.1 387,346 + -0.8 387,346 + +0.4 387,347 - -2.0 387,384 + -1.8 387,384 + -1.9 387,384 + -1.6 387,384 + -0.6 387,385 - -0.1 387,385 - -0.9 387,385 - -1.6 387,385 - -1.3 387,385 - -2.8 387,385 - -0.3 387,385 - -2.9 387,385 - -0.6 387,385 - +0.1 387,386 + -2.5 387,386 + +0.7 387,386 + +0.7 387,386 + -0.9 387,387 - -0.8 387,387 - -1.8 387,388 + -1.3 387,388 + -1.8 387,388 + -0.3 387,388 + -0.9 387,388 + -1.6 387,388 + -0.3 387,389 - -0.3 387,389 - -0.8 387,389 - -1.3 387,389 - -2.2 387,389 - -0.5 387,458 + GFF1749 0.14 -2.2 387,459 - GFF1749 0.14 -1.8 387,459 - GFF1749 0.14 -2.0 387,484 + GFF1749 0.17 -1.3 387,484 + GFF1749 0.17 -1.3 387,484 + GFF1749 0.17 -0.6 387,485 - GFF1749 0.17 -1.6 387,561 + GFF1749 0.26 -1.6 387,567 - GFF1749 0.27 -0.3 387,780 - GFF1749 0.52 -1.6 387,809 - GFF1749 0.56 -1.0 387,812 - GFF1749 0.56 -0.3 387,812 - GFF1749 0.56 -1.0 387,812 - GFF1749 0.56 -1.3 387,812 - GFF1749 0.56 -2.3 387,955 + GFF1749 0.73 -1.8 387,955 + GFF1749 0.73 -1.0 387,955 + GFF1749 0.73 -1.0 387,955 + GFF1749 0.73 -0.3 387,956 - GFF1749 0.73 -1.0 387,956 - GFF1749 0.73 -1.8 388,126 + -1.3 388,126 + -1.0 388,126 + -1.8 388,180 - -0.2 388,269 + -0.6 388,270 - -0.4
Or see this region's nucleotide sequence