Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1450 and GFF1451 are separated by 200 nucleotides GFF1451 and GFF1452 are separated by 199 nucleotides
GFF1450 - hypothetical protein, at 96,033 to 97,049
GFF1450
GFF1451 - hypothetical protein, at 97,250 to 97,624
GFF1451
GFF1452 - Peptide antibiotic transporter SbmA, at 97,824 to 99,050
GFF1452
Position (kb) 97
98 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 96.364 kb on - strand, within GFF1450 at 96.364 kb on - strand, within GFF1450 at 96.379 kb on + strand, within GFF1450 at 96.379 kb on + strand, within GFF1450 at 96.379 kb on + strand, within GFF1450 at 96.379 kb on + strand, within GFF1450 at 96.380 kb on - strand, within GFF1450 at 96.380 kb on - strand, within GFF1450 at 96.488 kb on - strand, within GFF1450 at 96.488 kb on - strand, within GFF1450 at 96.490 kb on + strand, within GFF1450 at 96.491 kb on - strand, within GFF1450 at 96.491 kb on - strand, within GFF1450 at 96.491 kb on - strand, within GFF1450 at 96.541 kb on + strand, within GFF1450 at 96.542 kb on - strand, within GFF1450 at 96.542 kb on - strand, within GFF1450 at 96.542 kb on - strand, within GFF1450 at 96.542 kb on - strand, within GFF1450 at 96.542 kb on - strand, within GFF1450 at 96.542 kb on - strand, within GFF1450 at 96.580 kb on + strand, within GFF1450 at 96.580 kb on + strand, within GFF1450 at 96.580 kb on + strand, within GFF1450 at 96.581 kb on - strand, within GFF1450 at 96.581 kb on - strand, within GFF1450 at 96.625 kb on + strand, within GFF1450 at 96.625 kb on + strand, within GFF1450 at 96.625 kb on + strand, within GFF1450 at 96.647 kb on - strand, within GFF1450 at 96.647 kb on - strand, within GFF1450 at 96.647 kb on - strand, within GFF1450 at 96.689 kb on + strand, within GFF1450 at 96.689 kb on + strand, within GFF1450 at 96.689 kb on + strand, within GFF1450 at 96.706 kb on + strand, within GFF1450 at 96.706 kb on + strand, within GFF1450 at 96.707 kb on - strand, within GFF1450 at 96.707 kb on - strand, within GFF1450 at 96.836 kb on + strand, within GFF1450 at 96.852 kb on - strand, within GFF1450 at 96.884 kb on - strand, within GFF1450 at 96.884 kb on - strand, within GFF1450 at 96.884 kb on - strand, within GFF1450 at 96.900 kb on + strand, within GFF1450 at 96.901 kb on - strand, within GFF1450 at 96.901 kb on - strand, within GFF1450 at 96.901 kb on - strand, within GFF1450 at 96.977 kb on + strand at 96.977 kb on + strand at 96.978 kb on - strand at 96.986 kb on + strand at 96.986 kb on + strand at 96.987 kb on - strand at 97.003 kb on - strand at 97.003 kb on - strand at 97.050 kb on - strand at 97.050 kb on - strand at 97.050 kb on - strand at 97.058 kb on + strand at 97.058 kb on + strand at 97.059 kb on - strand at 97.059 kb on - strand at 97.059 kb on - strand at 97.065 kb on + strand at 97.069 kb on + strand at 97.069 kb on + strand at 97.069 kb on + strand at 97.070 kb on - strand at 97.070 kb on - strand at 97.070 kb on - strand at 97.070 kb on - strand at 97.082 kb on + strand at 97.083 kb on - strand at 97.083 kb on - strand at 97.150 kb on + strand at 97.190 kb on + strand at 97.190 kb on + strand at 97.203 kb on + strand at 97.210 kb on - strand at 97.238 kb on - strand at 97.246 kb on + strand at 97.246 kb on + strand at 97.247 kb on - strand at 97.247 kb on - strand at 97.268 kb on + strand at 97.268 kb on + strand at 97.268 kb on + strand at 97.268 kb on + strand at 97.318 kb on + strand, within GFF1451 at 97.318 kb on + strand, within GFF1451 at 97.318 kb on + strand, within GFF1451 at 97.319 kb on - strand, within GFF1451 at 97.353 kb on - strand, within GFF1451 at 97.388 kb on - strand, within GFF1451 at 97.606 kb on + strand at 97.606 kb on + strand at 97.616 kb on + strand at 97.616 kb on + strand at 97.617 kb on - strand at 97.617 kb on - strand at 97.617 kb on - strand at 97.623 kb on - strand at 97.646 kb on + strand at 97.646 kb on + strand at 97.647 kb on - strand at 97.647 kb on - strand at 97.647 kb on - strand at 97.651 kb on - strand at 97.651 kb on - strand at 97.680 kb on + strand at 97.680 kb on + strand at 97.680 kb on + strand at 97.681 kb on - strand at 97.787 kb on + strand at 97.803 kb on + strand at 97.804 kb on - strand at 97.806 kb on + strand at 97.806 kb on + strand at 97.807 kb on - strand at 97.807 kb on - strand at 97.813 kb on - strand at 97.813 kb on - strand at 97.823 kb on + strand at 97.823 kb on + strand at 97.824 kb on - strand at 97.900 kb on + strand at 97.900 kb on + strand at 97.900 kb on + strand at 97.901 kb on - strand at 97.901 kb on - strand at 97.911 kb on + strand at 97.911 kb on + strand at 97.912 kb on - strand at 97.951 kb on + strand, within GFF1452 at 97.951 kb on + strand, within GFF1452 at 97.951 kb on + strand, within GFF1452 at 97.951 kb on + strand, within GFF1452 at 97.951 kb on + strand, within GFF1452 at 97.951 kb on + strand, within GFF1452 at 97.951 kb on + strand, within GFF1452 at 97.952 kb on - strand, within GFF1452 at 98.010 kb on + strand, within GFF1452 at 98.010 kb on + strand, within GFF1452 at 98.010 kb on + strand, within GFF1452 at 98.011 kb on - strand, within GFF1452 at 98.016 kb on + strand, within GFF1452 at 98.016 kb on + strand, within GFF1452 at 98.016 kb on + strand, within GFF1452 at 98.016 kb on + strand, within GFF1452 at 98.016 kb on + strand, within GFF1452 at 98.016 kb on + strand, within GFF1452 at 98.017 kb on - strand, within GFF1452 at 98.017 kb on - strand, within GFF1452 at 98.017 kb on - strand, within GFF1452 at 98.017 kb on - strand, within GFF1452 at 98.017 kb on - strand, within GFF1452 at 98.020 kb on - strand, within GFF1452 at 98.020 kb on - strand, within GFF1452 at 98.063 kb on + strand, within GFF1452 at 98.064 kb on - strand, within GFF1452 at 98.064 kb on - strand, within GFF1452 at 98.069 kb on + strand, within GFF1452 at 98.070 kb on - strand, within GFF1452 at 98.108 kb on + strand, within GFF1452 at 98.109 kb on - strand, within GFF1452 at 98.109 kb on - strand, within GFF1452 at 98.123 kb on + strand, within GFF1452 at 98.124 kb on + strand, within GFF1452 at 98.124 kb on + strand, within GFF1452 at 98.125 kb on - strand, within GFF1452 at 98.125 kb on - strand, within GFF1452 at 98.125 kb on - strand, within GFF1452 at 98.127 kb on + strand, within GFF1452 at 98.128 kb on - strand, within GFF1452 at 98.128 kb on - strand, within GFF1452 at 98.156 kb on + strand, within GFF1452 at 98.156 kb on + strand, within GFF1452 at 98.157 kb on - strand, within GFF1452 at 98.232 kb on + strand, within GFF1452 at 98.232 kb on + strand, within GFF1452 at 98.232 kb on + strand, within GFF1452 at 98.232 kb on + strand, within GFF1452 at 98.232 kb on + strand, within GFF1452 at 98.232 kb on + strand, within GFF1452 at 98.232 kb on + strand, within GFF1452 at 98.232 kb on + strand, within GFF1452 at 98.232 kb on + strand, within GFF1452 at 98.232 kb on + strand, within GFF1452 at 98.232 kb on + strand, within GFF1452 at 98.232 kb on + strand, within GFF1452 at 98.232 kb on + strand, within GFF1452 at 98.232 kb on + strand, within GFF1452 at 98.232 kb on + strand, within GFF1452 at 98.233 kb on - strand, within GFF1452 at 98.233 kb on - strand, within GFF1452 at 98.233 kb on - strand, within GFF1452 at 98.233 kb on - strand, within GFF1452 at 98.233 kb on - strand, within GFF1452 at 98.233 kb on - strand, within GFF1452 at 98.233 kb on - strand, within GFF1452 at 98.233 kb on - strand, within GFF1452 at 98.233 kb on - strand, within GFF1452 at 98.233 kb on - strand, within GFF1452 at 98.233 kb on - strand, within GFF1452 at 98.233 kb on - strand, within GFF1452 at 98.233 kb on - strand, within GFF1452 at 98.233 kb on - strand, within GFF1452 at 98.233 kb on - strand, within GFF1452 at 98.233 kb on - strand, within GFF1452 at 98.233 kb on - strand, within GFF1452 at 98.233 kb on - strand, within GFF1452 at 98.233 kb on - strand, within GFF1452 at 98.234 kb on + strand, within GFF1452 at 98.234 kb on + strand, within GFF1452 at 98.234 kb on + strand, within GFF1452 at 98.280 kb on - strand, within GFF1452 at 98.283 kb on + strand, within GFF1452 at 98.283 kb on + strand, within GFF1452 at 98.313 kb on + strand, within GFF1452 at 98.315 kb on + strand, within GFF1452 at 98.315 kb on + strand, within GFF1452 at 98.316 kb on - strand, within GFF1452 at 98.316 kb on - strand, within GFF1452 at 98.316 kb on - strand, within GFF1452 at 98.330 kb on + strand, within GFF1452 at 98.350 kb on - strand, within GFF1452 at 98.350 kb on - strand, within GFF1452 at 98.401 kb on + strand, within GFF1452 at 98.414 kb on + strand, within GFF1452 at 98.414 kb on + strand, within GFF1452 at 98.414 kb on + strand, within GFF1452 at 98.414 kb on + strand, within GFF1452 at 98.415 kb on - strand, within GFF1452 at 98.415 kb on - strand, within GFF1452 at 98.415 kb on - strand, within GFF1452 at 98.415 kb on - strand, within GFF1452 at 98.415 kb on - strand, within GFF1452 at 98.415 kb on - strand, within GFF1452 at 98.415 kb on - strand, within GFF1452 at 98.453 kb on + strand, within GFF1452 at 98.454 kb on - strand, within GFF1452 at 98.454 kb on - strand, within GFF1452 at 98.514 kb on + strand, within GFF1452 at 98.514 kb on + strand, within GFF1452 at 98.514 kb on + strand, within GFF1452 at 98.515 kb on - strand, within GFF1452 at 98.518 kb on + strand, within GFF1452 at 98.518 kb on + strand, within GFF1452 at 98.518 kb on + strand, within GFF1452 at 98.518 kb on + strand, within GFF1452 at 98.518 kb on + strand, within GFF1452 at 98.518 kb on + strand, within GFF1452 at 98.518 kb on + strand, within GFF1452 at 98.519 kb on - strand, within GFF1452 at 98.519 kb on - strand, within GFF1452 at 98.519 kb on - strand, within GFF1452 at 98.519 kb on - strand, within GFF1452 at 98.519 kb on - strand, within GFF1452 at 98.519 kb on - strand, within GFF1452 at 98.519 kb on - strand, within GFF1452 at 98.519 kb on - strand, within GFF1452 at 98.519 kb on - strand, within GFF1452
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 96,364 - GFF1450 0.33 -0.2 96,364 - GFF1450 0.33 -0.6 96,379 + GFF1450 0.34 +0.8 96,379 + GFF1450 0.34 +0.1 96,379 + GFF1450 0.34 -1.6 96,379 + GFF1450 0.34 -1.0 96,380 - GFF1450 0.34 -0.6 96,380 - GFF1450 0.34 -0.7 96,488 - GFF1450 0.45 -0.5 96,488 - GFF1450 0.45 +0.5 96,490 + GFF1450 0.45 +1.0 96,491 - GFF1450 0.45 -1.0 96,491 - GFF1450 0.45 -1.3 96,491 - GFF1450 0.45 -1.3 96,541 + GFF1450 0.50 -0.2 96,542 - GFF1450 0.50 -0.8 96,542 - GFF1450 0.50 -0.5 96,542 - GFF1450 0.50 -0.4 96,542 - GFF1450 0.50 -0.7 96,542 - GFF1450 0.50 -1.0 96,542 - GFF1450 0.50 +0.4 96,580 + GFF1450 0.54 +0.3 96,580 + GFF1450 0.54 -0.4 96,580 + GFF1450 0.54 -1.6 96,581 - GFF1450 0.54 -1.0 96,581 - GFF1450 0.54 -0.1 96,625 + GFF1450 0.58 +1.0 96,625 + GFF1450 0.58 -0.5 96,625 + GFF1450 0.58 -1.4 96,647 - GFF1450 0.60 -1.3 96,647 - GFF1450 0.60 -0.9 96,647 - GFF1450 0.60 -1.8 96,689 + GFF1450 0.65 +0.0 96,689 + GFF1450 0.65 +0.0 96,689 + GFF1450 0.65 -1.0 96,706 + GFF1450 0.66 -0.3 96,706 + GFF1450 0.66 -0.6 96,707 - GFF1450 0.66 -0.6 96,707 - GFF1450 0.66 -0.2 96,836 + GFF1450 0.79 +0.3 96,852 - GFF1450 0.81 +0.5 96,884 - GFF1450 0.84 -0.2 96,884 - GFF1450 0.84 -0.6 96,884 - GFF1450 0.84 -0.2 96,900 + GFF1450 0.85 +0.2 96,901 - GFF1450 0.85 -1.3 96,901 - GFF1450 0.85 -1.1 96,901 - GFF1450 0.85 +0.0 96,977 + -0.4 96,977 + -0.6 96,978 - +0.3 96,986 + -0.4 96,986 + +0.0 96,987 - -1.0 97,003 - -1.0 97,003 - -0.1 97,050 - -1.3 97,050 - -0.9 97,050 - -0.8 97,058 + +0.1 97,058 + +0.0 97,059 - -1.3 97,059 - +0.3 97,059 - +0.2 97,065 + -1.6 97,069 + -0.4 97,069 + +0.0 97,069 + -1.6 97,070 - -0.7 97,070 - -1.4 97,070 - +0.5 97,070 - -0.6 97,082 + -0.9 97,083 - -0.2 97,083 - -0.6 97,150 + -1.8 97,190 + -0.6 97,190 + -0.2 97,203 + -1.0 97,210 - +0.4 97,238 - -1.2 97,246 + +0.4 97,246 + -0.9 97,247 - +0.1 97,247 - +0.1 97,268 + +1.6 97,268 + -0.7 97,268 + +0.3 97,268 + -1.2 97,318 + GFF1451 0.18 -1.0 97,318 + GFF1451 0.18 -1.5 97,318 + GFF1451 0.18 +0.0 97,319 - GFF1451 0.18 -0.9 97,353 - GFF1451 0.27 -1.0 97,388 - GFF1451 0.37 -1.6 97,606 + +0.0 97,606 + -0.4 97,616 + -0.6 97,616 + -1.0 97,617 - -3.3 97,617 - -1.7 97,617 - +1.0 97,623 - +0.6 97,646 + -2.7 97,646 + -0.2 97,647 - -1.3 97,647 - -1.0 97,647 - -0.5 97,651 - -0.2 97,651 - +0.6 97,680 + +0.0 97,680 + -0.8 97,680 + +0.3 97,681 - +0.0 97,787 + -0.4 97,803 + +0.6 97,804 - -1.6 97,806 + -3.2 97,806 + +1.0 97,807 - +0.2 97,807 - -0.1 97,813 - -0.5 97,813 - -0.1 97,823 + -0.3 97,823 + +0.2 97,824 - -1.0 97,900 + +0.0 97,900 + -0.7 97,900 + -0.3 97,901 - -0.5 97,901 - +0.1 97,911 + -0.4 97,911 + -0.2 97,912 - -0.2 97,951 + GFF1452 0.10 -1.3 97,951 + GFF1452 0.10 -0.6 97,951 + GFF1452 0.10 -2.3 97,951 + GFF1452 0.10 -0.8 97,951 + GFF1452 0.10 +0.8 97,951 + GFF1452 0.10 -0.2 97,951 + GFF1452 0.10 -2.0 97,952 - GFF1452 0.10 -0.6 98,010 + GFF1452 0.15 -0.7 98,010 + GFF1452 0.15 -0.5 98,010 + GFF1452 0.15 -1.1 98,011 - GFF1452 0.15 -0.6 98,016 + GFF1452 0.16 -0.2 98,016 + GFF1452 0.16 -0.9 98,016 + GFF1452 0.16 -2.8 98,016 + GFF1452 0.16 -0.3 98,016 + GFF1452 0.16 -0.9 98,016 + GFF1452 0.16 +0.2 98,017 - GFF1452 0.16 -1.2 98,017 - GFF1452 0.16 -1.2 98,017 - GFF1452 0.16 -0.5 98,017 - GFF1452 0.16 -0.3 98,017 - GFF1452 0.16 +0.7 98,020 - GFF1452 0.16 +0.9 98,020 - GFF1452 0.16 -0.5 98,063 + GFF1452 0.19 -0.0 98,064 - GFF1452 0.20 +0.2 98,064 - GFF1452 0.20 +0.0 98,069 + GFF1452 0.20 -0.8 98,070 - GFF1452 0.20 +0.3 98,108 + GFF1452 0.23 -0.2 98,109 - GFF1452 0.23 -0.9 98,109 - GFF1452 0.23 -1.0 98,123 + GFF1452 0.24 -1.2 98,124 + GFF1452 0.24 -0.1 98,124 + GFF1452 0.24 -0.8 98,125 - GFF1452 0.25 +1.0 98,125 - GFF1452 0.25 +0.3 98,125 - GFF1452 0.25 -1.3 98,127 + GFF1452 0.25 -0.6 98,128 - GFF1452 0.25 +0.7 98,128 - GFF1452 0.25 -1.4 98,156 + GFF1452 0.27 -0.9 98,156 + GFF1452 0.27 +0.5 98,157 - GFF1452 0.27 -0.0 98,232 + GFF1452 0.33 -1.1 98,232 + GFF1452 0.33 -0.3 98,232 + GFF1452 0.33 -1.1 98,232 + GFF1452 0.33 +0.0 98,232 + GFF1452 0.33 -0.8 98,232 + GFF1452 0.33 +0.1 98,232 + GFF1452 0.33 -0.4 98,232 + GFF1452 0.33 -0.7 98,232 + GFF1452 0.33 +0.1 98,232 + GFF1452 0.33 -0.6 98,232 + GFF1452 0.33 +0.0 98,232 + GFF1452 0.33 +0.0 98,232 + GFF1452 0.33 +0.8 98,232 + GFF1452 0.33 -1.0 98,232 + GFF1452 0.33 +0.2 98,233 - GFF1452 0.33 -0.6 98,233 - GFF1452 0.33 -0.8 98,233 - GFF1452 0.33 -0.4 98,233 - GFF1452 0.33 -0.2 98,233 - GFF1452 0.33 -0.2 98,233 - GFF1452 0.33 +0.3 98,233 - GFF1452 0.33 +0.4 98,233 - GFF1452 0.33 -1.0 98,233 - GFF1452 0.33 -0.7 98,233 - GFF1452 0.33 -0.6 98,233 - GFF1452 0.33 -1.8 98,233 - GFF1452 0.33 +0.0 98,233 - GFF1452 0.33 +0.0 98,233 - GFF1452 0.33 -1.6 98,233 - GFF1452 0.33 -0.4 98,233 - GFF1452 0.33 -1.0 98,233 - GFF1452 0.33 -1.0 98,233 - GFF1452 0.33 +0.4 98,233 - GFF1452 0.33 -0.5 98,234 + GFF1452 0.33 -0.7 98,234 + GFF1452 0.33 +0.8 98,234 + GFF1452 0.33 +0.2 98,280 - GFF1452 0.37 -1.8 98,283 + GFF1452 0.37 -1.0 98,283 + GFF1452 0.37 +0.0 98,313 + GFF1452 0.40 +0.0 98,315 + GFF1452 0.40 +0.6 98,315 + GFF1452 0.40 +0.7 98,316 - GFF1452 0.40 +0.6 98,316 - GFF1452 0.40 +0.9 98,316 - GFF1452 0.40 -0.3 98,330 + GFF1452 0.41 +0.1 98,350 - GFF1452 0.43 -1.4 98,350 - GFF1452 0.43 +0.1 98,401 + GFF1452 0.47 -0.6 98,414 + GFF1452 0.48 +0.8 98,414 + GFF1452 0.48 -0.1 98,414 + GFF1452 0.48 -0.7 98,414 + GFF1452 0.48 +0.8 98,415 - GFF1452 0.48 +0.0 98,415 - GFF1452 0.48 -1.8 98,415 - GFF1452 0.48 +0.1 98,415 - GFF1452 0.48 +0.3 98,415 - GFF1452 0.48 -0.6 98,415 - GFF1452 0.48 -0.7 98,415 - GFF1452 0.48 -1.0 98,453 + GFF1452 0.51 +0.2 98,454 - GFF1452 0.51 +0.0 98,454 - GFF1452 0.51 +1.8 98,514 + GFF1452 0.56 +0.0 98,514 + GFF1452 0.56 -1.8 98,514 + GFF1452 0.56 +0.4 98,515 - GFF1452 0.56 -2.7 98,518 + GFF1452 0.57 -0.4 98,518 + GFF1452 0.57 -0.2 98,518 + GFF1452 0.57 +0.2 98,518 + GFF1452 0.57 +0.1 98,518 + GFF1452 0.57 -2.4 98,518 + GFF1452 0.57 -1.0 98,518 + GFF1452 0.57 -0.4 98,519 - GFF1452 0.57 -1.6 98,519 - GFF1452 0.57 +0.4 98,519 - GFF1452 0.57 +0.3 98,519 - GFF1452 0.57 -0.4 98,519 - GFF1452 0.57 -1.0 98,519 - GFF1452 0.57 -1.1 98,519 - GFF1452 0.57 -0.7 98,519 - GFF1452 0.57 +0.0 98,519 - GFF1452 0.57 +0.1
Or see this region's nucleotide sequence