Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1317 and GFF1318 are separated by 39 nucleotides GFF1318 and GFF1319 overlap by 11 nucleotides GFF1319 and GFF1320 are separated by 13 nucleotides
GFF1317 - Hydroxyacylglutathione hydrolase, at 579,717 to 580,496
GFF1317
GFF1318 - hypothetical protein, at 580,536 to 581,366
GFF1318
GFF1319 - Ribonuclease H, at 581,356 to 581,781
GFF1319
GFF1320 - DNA polymerase III subunit epsilon, at 581,795 to 582,475
GFF1320
Position (kb) 580
581
582 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 579.568 kb on + strand at 579.569 kb on - strand at 579.611 kb on - strand at 579.617 kb on - strand at 579.617 kb on - strand at 579.652 kb on - strand at 579.652 kb on - strand at 579.652 kb on - strand at 579.652 kb on - strand at 579.877 kb on - strand, within GFF1317 at 579.877 kb on - strand, within GFF1317 at 579.906 kb on + strand, within GFF1317 at 579.927 kb on + strand, within GFF1317 at 579.959 kb on + strand, within GFF1317 at 579.959 kb on + strand, within GFF1317 at 579.960 kb on - strand, within GFF1317 at 579.961 kb on + strand, within GFF1317 at 579.961 kb on + strand, within GFF1317 at 579.961 kb on + strand, within GFF1317 at 579.962 kb on - strand, within GFF1317 at 579.962 kb on - strand, within GFF1317 at 580.014 kb on + strand, within GFF1317 at 580.015 kb on - strand, within GFF1317 at 580.024 kb on + strand, within GFF1317 at 580.024 kb on + strand, within GFF1317 at 580.024 kb on + strand, within GFF1317 at 580.024 kb on + strand, within GFF1317 at 580.024 kb on + strand, within GFF1317 at 580.024 kb on + strand, within GFF1317 at 580.024 kb on + strand, within GFF1317 at 580.024 kb on + strand, within GFF1317 at 580.025 kb on - strand, within GFF1317 at 580.025 kb on - strand, within GFF1317 at 580.025 kb on - strand, within GFF1317 at 580.111 kb on + strand, within GFF1317 at 580.111 kb on + strand, within GFF1317 at 580.111 kb on + strand, within GFF1317 at 580.112 kb on - strand, within GFF1317 at 580.112 kb on - strand, within GFF1317 at 580.112 kb on - strand, within GFF1317 at 580.112 kb on - strand, within GFF1317 at 580.114 kb on + strand, within GFF1317 at 580.114 kb on + strand, within GFF1317 at 580.115 kb on - strand, within GFF1317 at 580.115 kb on - strand, within GFF1317 at 580.115 kb on - strand, within GFF1317 at 580.133 kb on + strand, within GFF1317 at 580.134 kb on - strand, within GFF1317 at 580.134 kb on - strand, within GFF1317 at 580.164 kb on + strand, within GFF1317 at 580.164 kb on + strand, within GFF1317 at 580.165 kb on - strand, within GFF1317 at 580.165 kb on - strand, within GFF1317 at 580.167 kb on + strand, within GFF1317 at 580.167 kb on + strand, within GFF1317 at 580.168 kb on - strand, within GFF1317 at 580.168 kb on - strand, within GFF1317 at 580.168 kb on - strand, within GFF1317 at 580.168 kb on - strand, within GFF1317 at 580.168 kb on - strand, within GFF1317 at 580.168 kb on - strand, within GFF1317 at 580.190 kb on + strand, within GFF1317 at 580.190 kb on + strand, within GFF1317 at 580.232 kb on - strand, within GFF1317 at 580.258 kb on + strand, within GFF1317 at 580.259 kb on - strand, within GFF1317 at 580.259 kb on - strand, within GFF1317 at 580.330 kb on - strand, within GFF1317 at 580.341 kb on + strand, within GFF1317 at 580.342 kb on - strand, within GFF1317 at 580.342 kb on - strand, within GFF1317 at 580.429 kb on - strand at 580.438 kb on + strand at 580.438 kb on + strand at 580.438 kb on + strand at 580.438 kb on + strand at 580.438 kb on + strand at 580.438 kb on + strand at 580.438 kb on + strand at 580.439 kb on - strand at 580.439 kb on - strand at 580.439 kb on - strand at 580.439 kb on - strand at 580.474 kb on - strand at 580.474 kb on - strand at 580.475 kb on + strand at 580.476 kb on - strand at 580.583 kb on + strand at 580.583 kb on + strand at 580.584 kb on - strand at 580.584 kb on - strand at 580.584 kb on - strand at 580.584 kb on - strand at 580.635 kb on + strand, within GFF1318 at 580.635 kb on + strand, within GFF1318 at 580.635 kb on + strand, within GFF1318 at 580.635 kb on + strand, within GFF1318 at 580.635 kb on + strand, within GFF1318 at 580.636 kb on - strand, within GFF1318 at 580.636 kb on - strand, within GFF1318 at 580.636 kb on - strand, within GFF1318 at 580.636 kb on - strand, within GFF1318 at 580.636 kb on - strand, within GFF1318 at 580.637 kb on + strand, within GFF1318 at 580.637 kb on + strand, within GFF1318 at 580.637 kb on + strand, within GFF1318 at 580.638 kb on - strand, within GFF1318 at 580.638 kb on - strand, within GFF1318 at 580.638 kb on - strand, within GFF1318 at 580.638 kb on - strand, within GFF1318 at 580.638 kb on - strand, within GFF1318 at 580.638 kb on - strand, within GFF1318 at 580.638 kb on - strand, within GFF1318 at 580.795 kb on + strand, within GFF1318 at 580.795 kb on + strand, within GFF1318 at 580.795 kb on + strand, within GFF1318 at 580.796 kb on - strand, within GFF1318 at 580.796 kb on - strand, within GFF1318 at 580.928 kb on + strand, within GFF1318 at 580.929 kb on - strand, within GFF1318 at 580.929 kb on - strand, within GFF1318 at 581.056 kb on + strand, within GFF1318 at 581.056 kb on + strand, within GFF1318 at 581.056 kb on + strand, within GFF1318 at 581.078 kb on + strand, within GFF1318 at 581.078 kb on + strand, within GFF1318 at 581.086 kb on - strand, within GFF1318 at 581.187 kb on + strand, within GFF1318 at 581.187 kb on + strand, within GFF1318 at 581.188 kb on - strand, within GFF1318 at 581.227 kb on + strand, within GFF1318 at 581.227 kb on + strand, within GFF1318 at 581.228 kb on - strand, within GFF1318 at 581.228 kb on - strand, within GFF1318 at 581.230 kb on + strand, within GFF1318 at 581.230 kb on + strand, within GFF1318 at 581.296 kb on + strand at 581.297 kb on - strand at 581.297 kb on - strand at 581.321 kb on - strand at 581.321 kb on - strand at 581.759 kb on + strand at 581.759 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 579,568 + -1.1 579,569 - -0.1 579,611 - -0.5 579,617 - -1.1 579,617 - +1.3 579,652 - -1.0 579,652 - -0.1 579,652 - -0.6 579,652 - -1.7 579,877 - GFF1317 0.21 -0.7 579,877 - GFF1317 0.21 +0.5 579,906 + GFF1317 0.24 -0.7 579,927 + GFF1317 0.27 -0.4 579,959 + GFF1317 0.31 +0.4 579,959 + GFF1317 0.31 +0.1 579,960 - GFF1317 0.31 +0.1 579,961 + GFF1317 0.31 -0.9 579,961 + GFF1317 0.31 -0.6 579,961 + GFF1317 0.31 -1.1 579,962 - GFF1317 0.31 -0.5 579,962 - GFF1317 0.31 -1.1 580,014 + GFF1317 0.38 -1.1 580,015 - GFF1317 0.38 -1.5 580,024 + GFF1317 0.39 +0.1 580,024 + GFF1317 0.39 +0.9 580,024 + GFF1317 0.39 +0.5 580,024 + GFF1317 0.39 -1.4 580,024 + GFF1317 0.39 +0.6 580,024 + GFF1317 0.39 -1.7 580,024 + GFF1317 0.39 -0.3 580,024 + GFF1317 0.39 +0.7 580,025 - GFF1317 0.39 -1.5 580,025 - GFF1317 0.39 -1.1 580,025 - GFF1317 0.39 +0.2 580,111 + GFF1317 0.51 -0.6 580,111 + GFF1317 0.51 +0.4 580,111 + GFF1317 0.51 +0.8 580,112 - GFF1317 0.51 +1.1 580,112 - GFF1317 0.51 -1.1 580,112 - GFF1317 0.51 -0.7 580,112 - GFF1317 0.51 -0.5 580,114 + GFF1317 0.51 +0.6 580,114 + GFF1317 0.51 -1.5 580,115 - GFF1317 0.51 -1.1 580,115 - GFF1317 0.51 +0.2 580,115 - GFF1317 0.51 -0.5 580,133 + GFF1317 0.53 -0.6 580,134 - GFF1317 0.53 +0.9 580,134 - GFF1317 0.53 +0.7 580,164 + GFF1317 0.57 -0.6 580,164 + GFF1317 0.57 -0.7 580,165 - GFF1317 0.57 -0.5 580,165 - GFF1317 0.57 +0.2 580,167 + GFF1317 0.58 +0.4 580,167 + GFF1317 0.58 -1.0 580,168 - GFF1317 0.58 -1.5 580,168 - GFF1317 0.58 -1.1 580,168 - GFF1317 0.58 +0.1 580,168 - GFF1317 0.58 -1.0 580,168 - GFF1317 0.58 -2.0 580,168 - GFF1317 0.58 -2.1 580,190 + GFF1317 0.61 -0.1 580,190 + GFF1317 0.61 -0.2 580,232 - GFF1317 0.66 +0.4 580,258 + GFF1317 0.69 -1.7 580,259 - GFF1317 0.69 -0.1 580,259 - GFF1317 0.69 -1.7 580,330 - GFF1317 0.79 -0.8 580,341 + GFF1317 0.80 -0.8 580,342 - GFF1317 0.80 +0.1 580,342 - GFF1317 0.80 +0.3 580,429 - -0.6 580,438 + -0.1 580,438 + -0.5 580,438 + -0.1 580,438 + -0.0 580,438 + -0.4 580,438 + -1.5 580,438 + +0.1 580,439 - +0.6 580,439 - -0.1 580,439 - -1.7 580,439 - -0.0 580,474 - -0.5 580,474 - -0.4 580,475 + -2.0 580,476 - -1.1 580,583 + -0.4 580,583 + -2.2 580,584 - -2.7 580,584 - -1.3 580,584 - -1.0 580,584 - -1.5 580,635 + GFF1318 0.12 -0.7 580,635 + GFF1318 0.12 -1.2 580,635 + GFF1318 0.12 -1.5 580,635 + GFF1318 0.12 -1.3 580,635 + GFF1318 0.12 -2.1 580,636 - GFF1318 0.12 -1.5 580,636 - GFF1318 0.12 -1.3 580,636 - GFF1318 0.12 -1.1 580,636 - GFF1318 0.12 -1.3 580,636 - GFF1318 0.12 -0.5 580,637 + GFF1318 0.12 -0.6 580,637 + GFF1318 0.12 -1.5 580,637 + GFF1318 0.12 -2.0 580,638 - GFF1318 0.12 -2.6 580,638 - GFF1318 0.12 -1.4 580,638 - GFF1318 0.12 -2.5 580,638 - GFF1318 0.12 -3.4 580,638 - GFF1318 0.12 -2.1 580,638 - GFF1318 0.12 -1.4 580,638 - GFF1318 0.12 -3.4 580,795 + GFF1318 0.31 -0.9 580,795 + GFF1318 0.31 -1.5 580,795 + GFF1318 0.31 -1.1 580,796 - GFF1318 0.31 +0.5 580,796 - GFF1318 0.31 -0.5 580,928 + GFF1318 0.47 -1.1 580,929 - GFF1318 0.47 -1.1 580,929 - GFF1318 0.47 -1.1 581,056 + GFF1318 0.63 -2.0 581,056 + GFF1318 0.63 -0.1 581,056 + GFF1318 0.63 -0.8 581,078 + GFF1318 0.65 -1.7 581,078 + GFF1318 0.65 -1.2 581,086 - GFF1318 0.66 +0.1 581,187 + GFF1318 0.78 -1.6 581,187 + GFF1318 0.78 -0.1 581,188 - GFF1318 0.78 -1.2 581,227 + GFF1318 0.83 -1.1 581,227 + GFF1318 0.83 -1.2 581,228 - GFF1318 0.83 -1.5 581,228 - GFF1318 0.83 -0.3 581,230 + GFF1318 0.84 -1.5 581,230 + GFF1318 0.84 -1.5 581,296 + -1.7 581,297 - -0.8 581,297 - -0.1 581,321 - +0.9 581,321 - -1.2 581,759 + -2.0 581,759 + -1.1
Or see this region's nucleotide sequence