Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1302 and GFF1303 are separated by 3 nucleotides GFF1303 and GFF1304 are separated by 27 nucleotides GFF1304 and GFF1305 are separated by 136 nucleotides
GFF1302 - Trigger factor, at 562,294 to 563,604
GFF1302
GFF1303 - ATP-dependent Clp protease proteolytic subunit, at 563,608 to 564,255
GFF1303
GFF1304 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 564,283 to 565,572
GFF1304
GFF1305 - Lon protease, at 565,709 to 568,141
GFF1305
Position (kb) 564
565
566 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 563.417 kb on + strand, within GFF1302 at 563.470 kb on + strand, within GFF1302 at 563.555 kb on + strand at 563.571 kb on + strand at 563.602 kb on + strand at 563.602 kb on + strand at 564.243 kb on + strand at 564.253 kb on + strand at 564.253 kb on + strand at 564.264 kb on + strand at 564.264 kb on + strand at 564.264 kb on + strand at 564.268 kb on + strand at 564.268 kb on + strand at 564.279 kb on + strand at 564.279 kb on + strand at 564.314 kb on + strand at 564.314 kb on + strand at 564.314 kb on + strand at 564.314 kb on + strand at 564.314 kb on + strand at 564.314 kb on + strand at 564.316 kb on + strand at 564.316 kb on + strand at 564.316 kb on + strand at 564.316 kb on + strand at 564.316 kb on + strand at 564.316 kb on + strand at 564.316 kb on + strand at 564.316 kb on + strand at 564.316 kb on + strand at 564.316 kb on + strand at 564.317 kb on - strand at 564.381 kb on + strand at 564.381 kb on + strand at 564.381 kb on + strand at 564.381 kb on + strand at 564.381 kb on + strand at 564.404 kb on + strand at 564.404 kb on + strand at 564.417 kb on + strand, within GFF1304 at 564.417 kb on + strand, within GFF1304 at 564.417 kb on + strand, within GFF1304 at 564.417 kb on + strand, within GFF1304 at 564.417 kb on + strand, within GFF1304 at 564.495 kb on + strand, within GFF1304 at 564.508 kb on + strand, within GFF1304 at 564.508 kb on + strand, within GFF1304 at 564.508 kb on + strand, within GFF1304 at 564.508 kb on + strand, within GFF1304 at 564.508 kb on + strand, within GFF1304 at 564.508 kb on + strand, within GFF1304 at 564.508 kb on + strand, within GFF1304 at 564.508 kb on + strand, within GFF1304 at 564.508 kb on + strand, within GFF1304 at 564.508 kb on + strand, within GFF1304 at 564.524 kb on + strand, within GFF1304 at 564.556 kb on + strand, within GFF1304 at 564.556 kb on + strand, within GFF1304 at 564.556 kb on + strand, within GFF1304 at 564.556 kb on + strand, within GFF1304 at 564.580 kb on + strand, within GFF1304 at 564.580 kb on + strand, within GFF1304 at 564.582 kb on + strand, within GFF1304 at 564.757 kb on + strand, within GFF1304 at 564.757 kb on + strand, within GFF1304 at 564.757 kb on + strand, within GFF1304 at 564.757 kb on + strand, within GFF1304 at 564.811 kb on + strand, within GFF1304 at 564.811 kb on + strand, within GFF1304 at 564.811 kb on + strand, within GFF1304 at 564.812 kb on - strand, within GFF1304 at 564.844 kb on + strand, within GFF1304 at 564.844 kb on + strand, within GFF1304 at 564.844 kb on + strand, within GFF1304 at 564.844 kb on + strand, within GFF1304 at 564.846 kb on + strand, within GFF1304 at 564.846 kb on + strand, within GFF1304 at 564.993 kb on + strand, within GFF1304 at 564.993 kb on + strand, within GFF1304 at 565.023 kb on + strand, within GFF1304 at 565.277 kb on + strand, within GFF1304 at 565.306 kb on + strand, within GFF1304 at 565.306 kb on + strand, within GFF1304 at 565.306 kb on + strand, within GFF1304 at 565.306 kb on + strand, within GFF1304 at 565.306 kb on + strand, within GFF1304 at 565.306 kb on + strand, within GFF1304 at 565.307 kb on - strand, within GFF1304 at 565.374 kb on + strand, within GFF1304 at 565.392 kb on + strand, within GFF1304 at 565.439 kb on + strand, within GFF1304 at 565.450 kb on + strand at 565.450 kb on + strand at 565.450 kb on + strand at 565.450 kb on + strand at 565.570 kb on + strand at 565.570 kb on + strand at 565.570 kb on + strand at 565.570 kb on + strand at 565.571 kb on - strand at 565.571 kb on - strand at 565.571 kb on - strand at 565.571 kb on - strand at 565.608 kb on + strand at 565.615 kb on + strand at 565.615 kb on + strand at 565.615 kb on + strand at 565.615 kb on + strand at 565.615 kb on + strand at 565.615 kb on + strand at 565.615 kb on + strand at 565.616 kb on - strand at 565.616 kb on - strand at 565.616 kb on - strand at 565.618 kb on + strand at 565.665 kb on + strand at 565.665 kb on + strand at 565.665 kb on + strand at 565.665 kb on + strand at 565.665 kb on + strand at 565.666 kb on - strand at 565.695 kb on + strand at 565.709 kb on - strand at 565.764 kb on + strand at 566.147 kb on + strand, within GFF1305 at 566.204 kb on - strand, within GFF1305 at 566.377 kb on + strand, within GFF1305 at 566.412 kb on - strand, within GFF1305
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 563,417 + GFF1302 0.86 -2.0 563,470 + GFF1302 0.90 -2.1 563,555 + -0.1 563,571 + -1.1 563,602 + -0.4 563,602 + -0.6 564,243 + -2.2 564,253 + -2.1 564,253 + -0.7 564,264 + -3.5 564,264 + -1.7 564,264 + -1.0 564,268 + -0.7 564,268 + -1.7 564,279 + -0.3 564,279 + -2.0 564,314 + -0.6 564,314 + -2.1 564,314 + -0.7 564,314 + -1.6 564,314 + -2.1 564,314 + -1.1 564,316 + -1.1 564,316 + -1.5 564,316 + -0.6 564,316 + -0.7 564,316 + -2.6 564,316 + -1.9 564,316 + -1.0 564,316 + -2.0 564,316 + -1.7 564,316 + -2.1 564,317 - -0.9 564,381 + -1.8 564,381 + -1.3 564,381 + -1.6 564,381 + -0.7 564,381 + -2.1 564,404 + -1.9 564,404 + -1.5 564,417 + GFF1304 0.10 -1.3 564,417 + GFF1304 0.10 -1.1 564,417 + GFF1304 0.10 -1.7 564,417 + GFF1304 0.10 -1.3 564,417 + GFF1304 0.10 -2.1 564,495 + GFF1304 0.16 -2.0 564,508 + GFF1304 0.17 -0.8 564,508 + GFF1304 0.17 -1.8 564,508 + GFF1304 0.17 -0.7 564,508 + GFF1304 0.17 -1.9 564,508 + GFF1304 0.17 -1.3 564,508 + GFF1304 0.17 -1.5 564,508 + GFF1304 0.17 -1.3 564,508 + GFF1304 0.17 -1.6 564,508 + GFF1304 0.17 -1.0 564,508 + GFF1304 0.17 -0.0 564,524 + GFF1304 0.19 -1.1 564,556 + GFF1304 0.21 -0.1 564,556 + GFF1304 0.21 -2.0 564,556 + GFF1304 0.21 -1.5 564,556 + GFF1304 0.21 -1.5 564,580 + GFF1304 0.23 -3.0 564,580 + GFF1304 0.23 -0.7 564,582 + GFF1304 0.23 -3.1 564,757 + GFF1304 0.37 -1.2 564,757 + GFF1304 0.37 -2.0 564,757 + GFF1304 0.37 -1.1 564,757 + GFF1304 0.37 -1.4 564,811 + GFF1304 0.41 -2.4 564,811 + GFF1304 0.41 -1.7 564,811 + GFF1304 0.41 +0.2 564,812 - GFF1304 0.41 -0.7 564,844 + GFF1304 0.43 -1.1 564,844 + GFF1304 0.43 -1.7 564,844 + GFF1304 0.43 -0.1 564,844 + GFF1304 0.43 -1.6 564,846 + GFF1304 0.44 -1.7 564,846 + GFF1304 0.44 -1.1 564,993 + GFF1304 0.55 -0.1 564,993 + GFF1304 0.55 -0.7 565,023 + GFF1304 0.57 -1.1 565,277 + GFF1304 0.77 -1.4 565,306 + GFF1304 0.79 -0.5 565,306 + GFF1304 0.79 -1.6 565,306 + GFF1304 0.79 -1.1 565,306 + GFF1304 0.79 -0.5 565,306 + GFF1304 0.79 -1.5 565,306 + GFF1304 0.79 -1.7 565,307 - GFF1304 0.79 -0.1 565,374 + GFF1304 0.85 -0.9 565,392 + GFF1304 0.86 -1.8 565,439 + GFF1304 0.90 -1.0 565,450 + -1.5 565,450 + -0.1 565,450 + -1.2 565,450 + -1.4 565,570 + -1.5 565,570 + -0.3 565,570 + -0.2 565,570 + -0.6 565,571 - -0.6 565,571 - -0.1 565,571 - -0.4 565,571 - -0.7 565,608 + -0.7 565,615 + -0.5 565,615 + -0.1 565,615 + -1.6 565,615 + -1.1 565,615 + -1.3 565,615 + -0.7 565,615 + -1.1 565,616 - -1.0 565,616 - -0.1 565,616 - +0.0 565,618 + -1.0 565,665 + +0.4 565,665 + -1.1 565,665 + -1.1 565,665 + -0.5 565,665 + -1.5 565,666 - -1.5 565,695 + -0.1 565,709 - -1.5 565,764 + -1.5 566,147 + GFF1305 0.18 -1.7 566,204 - GFF1305 0.20 -1.5 566,377 + GFF1305 0.27 -1.5 566,412 - GFF1305 0.29 -0.7
Or see this region's nucleotide sequence