Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1290 and GFF1291 are separated by 111 nucleotides GFF1291 and GFF1292 are separated by 46 nucleotides GFF1292 and GFF1293 are separated by 21 nucleotides
GFF1290 - hypothetical protein, at 549,012 to 549,611
GFF1290
GFF1291 - 3-hexulose-6-phosphate isomerase, at 549,723 to 550,259
GFF1291
GFF1292 - hypothetical protein, at 550,306 to 550,986
GFF1292
GFF1293 - hypothetical protein, at 551,008 to 552,084
GFF1293
Position (kb) 550
551 Strain fitness (log2 ratio) -2
-1
0
1 at 549.624 kb on + strand at 549.624 kb on + strand at 549.624 kb on + strand at 549.624 kb on + strand at 549.642 kb on + strand at 549.642 kb on + strand at 549.642 kb on + strand at 549.658 kb on + strand at 549.674 kb on + strand at 549.701 kb on + strand at 550.257 kb on + strand at 550.257 kb on + strand at 550.257 kb on + strand at 550.257 kb on + strand at 550.258 kb on - strand at 550.265 kb on + strand at 550.292 kb on + strand at 550.292 kb on + strand at 550.293 kb on - strand at 550.293 kb on - strand at 550.372 kb on + strand at 550.424 kb on - strand, within GFF1292 at 550.424 kb on - strand, within GFF1292 at 550.439 kb on + strand, within GFF1292 at 550.441 kb on + strand, within GFF1292 at 550.442 kb on - strand, within GFF1292 at 550.616 kb on - strand, within GFF1292 at 550.616 kb on - strand, within GFF1292 at 550.616 kb on - strand, within GFF1292 at 550.650 kb on - strand, within GFF1292 at 550.669 kb on - strand, within GFF1292 at 550.669 kb on - strand, within GFF1292 at 550.838 kb on - strand, within GFF1292 at 550.849 kb on - strand, within GFF1292 at 550.849 kb on - strand, within GFF1292 at 550.850 kb on + strand, within GFF1292 at 550.850 kb on + strand, within GFF1292 at 550.851 kb on - strand, within GFF1292 at 550.851 kb on - strand, within GFF1292 at 550.851 kb on - strand, within GFF1292 at 550.851 kb on - strand, within GFF1292 at 550.881 kb on + strand, within GFF1292 at 550.881 kb on + strand, within GFF1292 at 550.881 kb on + strand, within GFF1292 at 550.881 kb on + strand, within GFF1292 at 550.882 kb on - strand, within GFF1292 at 550.933 kb on - strand at 550.933 kb on - strand at 550.961 kb on - strand at 550.961 kb on - strand at 551.007 kb on + strand at 551.008 kb on - strand at 551.008 kb on - strand at 551.016 kb on + strand at 551.047 kb on + strand at 551.047 kb on + strand at 551.160 kb on + strand, within GFF1293 at 551.160 kb on + strand, within GFF1293 at 551.161 kb on - strand, within GFF1293 at 551.161 kb on - strand, within GFF1293 at 551.161 kb on - strand, within GFF1293 at 551.349 kb on + strand, within GFF1293 at 551.379 kb on + strand, within GFF1293 at 551.495 kb on - strand, within GFF1293 at 551.560 kb on + strand, within GFF1293 at 551.606 kb on + strand, within GFF1293 at 551.653 kb on + strand, within GFF1293 at 551.653 kb on + strand, within GFF1293 at 551.653 kb on + strand, within GFF1293 at 551.654 kb on - strand, within GFF1293 at 551.935 kb on + strand, within GFF1293 at 551.935 kb on + strand, within GFF1293 at 551.935 kb on + strand, within GFF1293 at 551.938 kb on - strand, within GFF1293
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 549,624 + +0.3 549,624 + -0.1 549,624 + -1.0 549,624 + -0.5 549,642 + -0.6 549,642 + -1.1 549,642 + -1.7 549,658 + -0.9 549,674 + -0.2 549,701 + -0.9 550,257 + +1.2 550,257 + -0.6 550,257 + -1.6 550,257 + -0.6 550,258 - -0.2 550,265 + -0.9 550,292 + -0.7 550,292 + +0.1 550,293 - +1.2 550,293 - -0.3 550,372 + -1.3 550,424 - GFF1292 0.17 -1.1 550,424 - GFF1292 0.17 +0.4 550,439 + GFF1292 0.20 -1.1 550,441 + GFF1292 0.20 +0.3 550,442 - GFF1292 0.20 -1.1 550,616 - GFF1292 0.46 -1.2 550,616 - GFF1292 0.46 -0.5 550,616 - GFF1292 0.46 -0.9 550,650 - GFF1292 0.51 -0.5 550,669 - GFF1292 0.53 -2.1 550,669 - GFF1292 0.53 +0.0 550,838 - GFF1292 0.78 -1.6 550,849 - GFF1292 0.80 -0.5 550,849 - GFF1292 0.80 -2.1 550,850 + GFF1292 0.80 -1.5 550,850 + GFF1292 0.80 -0.8 550,851 - GFF1292 0.80 -1.5 550,851 - GFF1292 0.80 -1.1 550,851 - GFF1292 0.80 -1.5 550,851 - GFF1292 0.80 -1.5 550,881 + GFF1292 0.84 -1.9 550,881 + GFF1292 0.84 -0.3 550,881 + GFF1292 0.84 -1.7 550,881 + GFF1292 0.84 -0.0 550,882 - GFF1292 0.85 -1.6 550,933 - -2.5 550,933 - -0.4 550,961 - -0.7 550,961 - -1.5 551,007 + -1.7 551,008 - -1.3 551,008 - -1.6 551,016 + -1.7 551,047 + -1.4 551,047 + +0.4 551,160 + GFF1293 0.14 +0.4 551,160 + GFF1293 0.14 -1.1 551,161 - GFF1293 0.14 -0.6 551,161 - GFF1293 0.14 -1.5 551,161 - GFF1293 0.14 +0.4 551,349 + GFF1293 0.32 -1.3 551,379 + GFF1293 0.34 -1.4 551,495 - GFF1293 0.45 -1.1 551,560 + GFF1293 0.51 -1.0 551,606 + GFF1293 0.56 -0.1 551,653 + GFF1293 0.60 -1.1 551,653 + GFF1293 0.60 -2.3 551,653 + GFF1293 0.60 -1.2 551,654 - GFF1293 0.60 -1.5 551,935 + GFF1293 0.86 -2.1 551,935 + GFF1293 0.86 +0.0 551,935 + GFF1293 0.86 -1.0 551,938 - GFF1293 0.86 -1.5
Or see this region's nucleotide sequence