Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1232 and GFF1233 are separated by 149 nucleotides GFF1233 and GFF1234 are separated by 19 nucleotides GFF1234 and GFF1235 are separated by 4 nucleotides
GFF1232 - Outer membrane protein A, at 477,433 to 478,539
GFF1232
GFF1233 - 5-methylthioadenosine/S-adenosylhomocysteine deaminase, at 478,689 to 479,981
GFF1233
GFF1234 - Ubiquinone biosynthesis O-methyltransferase, at 480,001 to 480,699
GFF1234
GFF1235 - N-acetylmuramic acid 6-phosphate phosphatase, at 480,704 to 481,348
GFF1235
Position (kb) 478
479
480 Strain fitness (log2 ratio) -2
-1
0
1 at 478.537 kb on + strand at 478.632 kb on + strand at 478.632 kb on + strand at 478.635 kb on - strand at 478.661 kb on + strand at 478.662 kb on - strand at 478.685 kb on + strand at 478.688 kb on + strand at 478.688 kb on + strand at 478.688 kb on + strand at 478.850 kb on + strand, within GFF1233 at 478.850 kb on + strand, within GFF1233 at 478.850 kb on + strand, within GFF1233 at 478.856 kb on + strand, within GFF1233 at 478.856 kb on + strand, within GFF1233 at 478.862 kb on + strand, within GFF1233 at 478.862 kb on + strand, within GFF1233 at 478.862 kb on + strand, within GFF1233 at 478.881 kb on + strand, within GFF1233 at 478.894 kb on - strand, within GFF1233 at 478.922 kb on + strand, within GFF1233 at 478.922 kb on + strand, within GFF1233 at 478.922 kb on + strand, within GFF1233 at 478.922 kb on + strand, within GFF1233 at 478.922 kb on + strand, within GFF1233 at 478.922 kb on + strand, within GFF1233 at 479.021 kb on + strand, within GFF1233 at 479.021 kb on + strand, within GFF1233 at 479.027 kb on + strand, within GFF1233 at 479.027 kb on + strand, within GFF1233 at 479.027 kb on + strand, within GFF1233 at 479.028 kb on - strand, within GFF1233 at 479.053 kb on + strand, within GFF1233 at 479.053 kb on + strand, within GFF1233 at 479.077 kb on + strand, within GFF1233 at 479.087 kb on + strand, within GFF1233 at 479.087 kb on + strand, within GFF1233 at 479.095 kb on + strand, within GFF1233 at 479.095 kb on + strand, within GFF1233 at 479.095 kb on + strand, within GFF1233 at 479.095 kb on + strand, within GFF1233 at 479.099 kb on + strand, within GFF1233 at 479.099 kb on + strand, within GFF1233 at 479.099 kb on + strand, within GFF1233 at 479.099 kb on + strand, within GFF1233 at 479.099 kb on + strand, within GFF1233 at 479.117 kb on + strand, within GFF1233 at 479.121 kb on + strand, within GFF1233 at 479.121 kb on + strand, within GFF1233 at 479.142 kb on + strand, within GFF1233 at 479.142 kb on + strand, within GFF1233 at 479.142 kb on + strand, within GFF1233 at 479.142 kb on + strand, within GFF1233 at 479.142 kb on + strand, within GFF1233 at 479.144 kb on + strand, within GFF1233 at 479.177 kb on + strand, within GFF1233 at 479.177 kb on + strand, within GFF1233 at 479.177 kb on + strand, within GFF1233 at 479.192 kb on + strand, within GFF1233 at 479.223 kb on + strand, within GFF1233 at 479.225 kb on + strand, within GFF1233 at 479.225 kb on + strand, within GFF1233 at 479.225 kb on + strand, within GFF1233 at 479.226 kb on - strand, within GFF1233 at 479.291 kb on + strand, within GFF1233 at 479.291 kb on + strand, within GFF1233 at 479.398 kb on + strand, within GFF1233 at 479.398 kb on + strand, within GFF1233 at 479.413 kb on + strand, within GFF1233 at 479.413 kb on + strand, within GFF1233 at 479.413 kb on + strand, within GFF1233 at 479.413 kb on + strand, within GFF1233 at 479.413 kb on + strand, within GFF1233 at 479.443 kb on + strand, within GFF1233 at 479.483 kb on + strand, within GFF1233 at 479.483 kb on + strand, within GFF1233 at 479.483 kb on + strand, within GFF1233 at 479.573 kb on + strand, within GFF1233 at 479.576 kb on + strand, within GFF1233 at 479.629 kb on + strand, within GFF1233 at 479.629 kb on + strand, within GFF1233 at 479.629 kb on + strand, within GFF1233 at 479.661 kb on + strand, within GFF1233 at 479.732 kb on + strand, within GFF1233 at 479.783 kb on + strand, within GFF1233 at 479.783 kb on + strand, within GFF1233 at 479.869 kb on + strand at 479.869 kb on + strand at 479.869 kb on + strand at 479.874 kb on + strand at 479.929 kb on + strand at 479.929 kb on + strand at 479.936 kb on + strand at 479.979 kb on + strand at 480.677 kb on + strand at 480.677 kb on + strand at 480.677 kb on + strand at 480.717 kb on + strand at 480.718 kb on - strand at 480.741 kb on + strand at 480.741 kb on + strand at 480.830 kb on + strand, within GFF1235 at 480.927 kb on + strand, within GFF1235
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 478,537 + -1.1 478,632 + -1.0 478,632 + -0.1 478,635 - -1.3 478,661 + -0.7 478,662 - -1.0 478,685 + -0.1 478,688 + +0.3 478,688 + -0.6 478,688 + -0.8 478,850 + GFF1233 0.12 -0.9 478,850 + GFF1233 0.12 -1.8 478,850 + GFF1233 0.12 -2.0 478,856 + GFF1233 0.13 -1.1 478,856 + GFF1233 0.13 -0.4 478,862 + GFF1233 0.13 -0.1 478,862 + GFF1233 0.13 -0.3 478,862 + GFF1233 0.13 -1.1 478,881 + GFF1233 0.15 -1.3 478,894 - GFF1233 0.16 +0.3 478,922 + GFF1233 0.18 -1.3 478,922 + GFF1233 0.18 -2.3 478,922 + GFF1233 0.18 -0.7 478,922 + GFF1233 0.18 -0.6 478,922 + GFF1233 0.18 -2.0 478,922 + GFF1233 0.18 -1.6 479,021 + GFF1233 0.26 -0.1 479,021 + GFF1233 0.26 -1.3 479,027 + GFF1233 0.26 -0.4 479,027 + GFF1233 0.26 -0.6 479,027 + GFF1233 0.26 -0.9 479,028 - GFF1233 0.26 -1.5 479,053 + GFF1233 0.28 -0.4 479,053 + GFF1233 0.28 -1.7 479,077 + GFF1233 0.30 -0.5 479,087 + GFF1233 0.31 -0.5 479,087 + GFF1233 0.31 -1.2 479,095 + GFF1233 0.31 -1.8 479,095 + GFF1233 0.31 -0.7 479,095 + GFF1233 0.31 -1.1 479,095 + GFF1233 0.31 -1.6 479,099 + GFF1233 0.32 -0.6 479,099 + GFF1233 0.32 -0.9 479,099 + GFF1233 0.32 -2.5 479,099 + GFF1233 0.32 -2.0 479,099 + GFF1233 0.32 -1.2 479,117 + GFF1233 0.33 -1.6 479,121 + GFF1233 0.33 -1.6 479,121 + GFF1233 0.33 -1.1 479,142 + GFF1233 0.35 -1.1 479,142 + GFF1233 0.35 -0.8 479,142 + GFF1233 0.35 +0.2 479,142 + GFF1233 0.35 -0.7 479,142 + GFF1233 0.35 -0.2 479,144 + GFF1233 0.35 -0.9 479,177 + GFF1233 0.38 -1.5 479,177 + GFF1233 0.38 -2.1 479,177 + GFF1233 0.38 -1.6 479,192 + GFF1233 0.39 -1.5 479,223 + GFF1233 0.41 -1.8 479,225 + GFF1233 0.41 -1.7 479,225 + GFF1233 0.41 +0.0 479,225 + GFF1233 0.41 -0.6 479,226 - GFF1233 0.42 -1.3 479,291 + GFF1233 0.47 -1.3 479,291 + GFF1233 0.47 -1.8 479,398 + GFF1233 0.55 -1.3 479,398 + GFF1233 0.55 -0.5 479,413 + GFF1233 0.56 -0.9 479,413 + GFF1233 0.56 -0.9 479,413 + GFF1233 0.56 -1.9 479,413 + GFF1233 0.56 -0.6 479,413 + GFF1233 0.56 -0.1 479,443 + GFF1233 0.58 -1.3 479,483 + GFF1233 0.61 -1.1 479,483 + GFF1233 0.61 +0.2 479,483 + GFF1233 0.61 -0.7 479,573 + GFF1233 0.68 -0.6 479,576 + GFF1233 0.69 -0.1 479,629 + GFF1233 0.73 -0.5 479,629 + GFF1233 0.73 +0.4 479,629 + GFF1233 0.73 -0.3 479,661 + GFF1233 0.75 -1.7 479,732 + GFF1233 0.81 -0.7 479,783 + GFF1233 0.85 -1.3 479,783 + GFF1233 0.85 +0.5 479,869 + -1.1 479,869 + -2.1 479,869 + -0.3 479,874 + -0.1 479,929 + -1.7 479,929 + -0.3 479,936 + -1.3 479,979 + -1.5 480,677 + -1.6 480,677 + -1.5 480,677 + -1.5 480,717 + -2.3 480,718 - -1.1 480,741 + -1.5 480,741 + -1.5 480,830 + GFF1235 0.20 -1.1 480,927 + GFF1235 0.35 -1.5
Or see this region's nucleotide sequence