Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03725

Experiment: NL-CCM_agar

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM_agar
1,167,239	+				-0.2
1,167,239	+				-0.1
1,167,239	+				+1.5
1,167,239	+				+0.5
1,167,239	+				+0.0
1,167,239	+				+0.2
1,167,239	+				-0.1
1,167,240	-				-1.2
1,167,240	-				-0.2
1,167,241	+				+0.5
1,167,241	+				+0.0
1,167,241	+				+0.2
1,167,241	+				-0.5
1,167,241	+				-0.1
1,167,241	+				-0.5
1,167,241	+				+0.3
1,167,241	+				-0.1
1,167,241	+				-0.8
1,167,242	-				+1.3
1,167,242	-				+0.1
1,167,242	-				-1.7
1,167,242	-				+1.7
1,167,242	-				+0.3
1,167,242	-				-1.7
1,167,242	-				+1.1
1,167,424	+				+0.5
1,167,424	+				-0.0
1,167,425	-				+0.2
1,167,425	-				-1.1
1,167,675	+		MPMX19_03724	0.38	+0.9
1,167,675	+		MPMX19_03724	0.38	-0.3
1,167,676	-		MPMX19_03724	0.38	+0.2
1,167,676	-		MPMX19_03724	0.38	-0.9
1,168,189	+				-1.3
1,168,189	+				-1.5
1,168,189	+				-0.9
1,168,189	+				+0.3
1,168,189	+				-2.0
1,168,189	+				-0.3
1,168,189	+				-2.3
1,168,189	+				-1.1
1,168,189	+				-2.4
1,168,189	+				-0.8
1,168,189	+				-1.5
1,168,189	+				-2.0
1,168,189	+				-1.8
1,168,189	+				-2.3
1,168,189	+				-0.3
1,168,189	+				+1.3
1,168,190	-				-1.0
1,168,190	-				+0.5
1,168,190	-				+0.5
1,168,190	-				+0.7
1,168,190	-				-1.5
1,168,190	-				-1.3
1,168,190	-				-0.6
1,168,190	-				-1.5
1,168,190	-				-0.1
1,168,190	-				+0.9
1,168,190	-				+0.6
1,168,190	-				-0.5
1,168,190	-				+1.2
1,168,190	-				-0.1
1,168,190	-				-0.3
1,168,190	-				-0.9
1,168,190	-				-1.3
1,168,190	-				+0.0
1,168,190	-				-2.1
1,168,309	+				-0.9
1,168,309	+				-0.3
1,168,309	+				+1.2
1,168,309	+				+0.4
1,168,309	+				-0.8
1,168,309	+				-0.6
1,168,309	+				+0.5
1,168,309	+				-0.3
1,168,309	+				-1.5
1,168,310	-				-1.3
1,168,310	-				-0.3
1,168,310	-				-0.1
1,168,387	+				+1.5
1,168,387	+				+0.1
1,168,387	+				-0.7
1,168,387	+				-0.4
1,168,387	+				-1.1
1,168,387	+				+0.5
1,168,387	+				-1.4
1,168,388	-				+0.6
1,168,388	-				+0.3
1,168,388	-				-0.1
1,168,388	-				+0.4
1,168,388	-				-0.3
1,168,388	-				+1.0
1,168,573	+		MPMX19_03725	0.16	+0.7
1,168,573	+		MPMX19_03725	0.16	+0.5
1,168,573	+		MPMX19_03725	0.16	-1.8
1,168,573	+		MPMX19_03725	0.16	+0.5
1,168,573	+		MPMX19_03725	0.16	-1.5
1,168,573	+		MPMX19_03725	0.16	-1.3
1,168,573	+		MPMX19_03725	0.16	-0.2
1,168,573	+		MPMX19_03725	0.16	+0.5
1,168,573	+		MPMX19_03725	0.16	+0.4
1,168,573	+		MPMX19_03725	0.16	+1.3
1,168,573	+		MPMX19_03725	0.16	-0.7
1,168,573	+		MPMX19_03725	0.16	+0.2
1,168,573	+		MPMX19_03725	0.16	-2.0
1,168,573	+		MPMX19_03725	0.16	-0.3
1,168,573	+		MPMX19_03725	0.16	+0.7
1,168,573	+		MPMX19_03725	0.16	-0.5
1,168,573	+		MPMX19_03725	0.16	-0.2
1,168,574	-		MPMX19_03725	0.16	-0.0
1,168,574	-		MPMX19_03725	0.16	-3.0
1,168,574	-		MPMX19_03725	0.16	-2.2
1,168,574	-		MPMX19_03725	0.16	-0.4
1,168,574	-		MPMX19_03725	0.16	-0.3
1,168,574	-		MPMX19_03725	0.16	-1.0
1,168,574	-		MPMX19_03725	0.16	-0.4
1,168,574	-		MPMX19_03725	0.16	-0.1
1,168,574	-		MPMX19_03725	0.16	-0.5
1,168,574	-		MPMX19_03725	0.16	-0.8
1,168,699	+		MPMX19_03725	0.20	-0.3
1,168,699	+		MPMX19_03725	0.20	-0.2
1,168,699	+		MPMX19_03725	0.20	-0.7
1,168,699	+		MPMX19_03725	0.20	-0.3
1,168,699	+		MPMX19_03725	0.20	-0.5
1,168,699	+		MPMX19_03725	0.20	+1.0
1,168,699	+		MPMX19_03725	0.20	+0.1
1,168,699	+		MPMX19_03725	0.20	-0.3
1,168,699	+		MPMX19_03725	0.20	+0.1
1,168,699	+		MPMX19_03725	0.20	+0.4
1,168,700	-		MPMX19_03725	0.20	+0.3
1,168,700	-		MPMX19_03725	0.20	-0.0
1,168,700	-		MPMX19_03725	0.20	-0.2
1,168,700	-		MPMX19_03725	0.20	-0.5
1,168,700	-		MPMX19_03725	0.20	-1.1
1,168,700	-		MPMX19_03725	0.20	-0.3
1,168,700	-		MPMX19_03725	0.20	-1.2
1,168,700	-		MPMX19_03725	0.20	-0.5
1,168,700	-		MPMX19_03725	0.20	+0.1
1,168,700	-		MPMX19_03725	0.20	-1.5
1,168,700	-		MPMX19_03725	0.20	+0.3
1,168,700	-		MPMX19_03725	0.20	-0.8
1,168,700	-		MPMX19_03725	0.20	-2.3
1,169,200	+		MPMX19_03725	0.38	-0.8
1,169,200	+		MPMX19_03725	0.38	+1.1
1,169,200	+		MPMX19_03725	0.38	-0.8
1,169,200	+		MPMX19_03725	0.38	-0.6
1,169,200	+		MPMX19_03725	0.38	+0.1
1,169,200	+		MPMX19_03725	0.38	-0.5
1,169,201	-		MPMX19_03725	0.38	-0.5
1,169,332	+		MPMX19_03725	0.43	-1.6
1,169,332	+		MPMX19_03725	0.43	-1.4
1,169,332	+		MPMX19_03725	0.43	+0.4
1,169,332	+		MPMX19_03725	0.43	-0.8
1,169,332	+		MPMX19_03725	0.43	-1.3
1,169,332	+		MPMX19_03725	0.43	+0.3
1,169,333	-		MPMX19_03725	0.43	-1.8
1,169,333	-		MPMX19_03725	0.43	-1.0
1,169,333	-		MPMX19_03725	0.43	-1.2
1,169,333	-		MPMX19_03725	0.43	-0.1
1,169,506	+		MPMX19_03725	0.49	+1.3
1,169,507	-		MPMX19_03725	0.49	+0.7
1,169,896	+		MPMX19_03725	0.63	-1.1
1,169,896	+		MPMX19_03725	0.63	-0.6
1,169,897	-		MPMX19_03725	0.63	-1.1
1,169,897	-		MPMX19_03725	0.63	+0.1
1,169,897	-		MPMX19_03725	0.63	+0.0
1,169,897	-		MPMX19_03725	0.63	+1.0
1,169,968	+		MPMX19_03725	0.66	-1.1
1,169,968	+		MPMX19_03725	0.66	-1.1
1,169,968	+		MPMX19_03725	0.66	-1.5
1,169,968	+		MPMX19_03725	0.66	-1.4
1,169,968	+		MPMX19_03725	0.66	-0.4
1,169,968	+		MPMX19_03725	0.66	-0.7
1,169,968	+		MPMX19_03725	0.66	-2.3
1,169,968	+		MPMX19_03725	0.66	-1.5
1,169,968	+		MPMX19_03725	0.66	-2.3
1,169,968	+		MPMX19_03725	0.66	-0.8
1,169,969	-		MPMX19_03725	0.66	+0.5
1,169,969	-		MPMX19_03725	0.66	-0.1
1,169,969	-		MPMX19_03725	0.66	-1.8
1,169,969	-		MPMX19_03725	0.66	+0.2
1,169,969	-		MPMX19_03725	0.66	+0.7
1,169,969	-		MPMX19_03725	0.66	-0.3
1,169,969	-		MPMX19_03725	0.66	-0.7
1,169,969	-		MPMX19_03725	0.66	-0.6
1,169,969	-		MPMX19_03725	0.66	-1.2
1,169,969	-		MPMX19_03725	0.66	-1.1
1,169,969	-		MPMX19_03725	0.66	-1.1
1,169,969	-		MPMX19_03725	0.66	-1.5
1,169,969	-		MPMX19_03725	0.66	-0.7
1,170,097	+		MPMX19_03725	0.70	-2.3
1,170,097	+		MPMX19_03725	0.70	-0.2
1,170,097	+		MPMX19_03725	0.70	+0.2
1,170,097	+		MPMX19_03725	0.70	-0.6
1,170,097	+		MPMX19_03725	0.70	-0.1
1,170,097	+		MPMX19_03725	0.70	-0.5
1,170,097	+		MPMX19_03725	0.70	-0.8
1,170,097	+		MPMX19_03725	0.70	+0.6
1,170,098	-		MPMX19_03725	0.70	-1.7
1,170,098	-		MPMX19_03725	0.70	+2.1
1,170,098	-		MPMX19_03725	0.70	-1.0
1,170,098	-		MPMX19_03725	0.70	-0.5
1,170,098	-		MPMX19_03725	0.70	-1.3
1,170,098	-		MPMX19_03725	0.70	+0.7
1,170,098	-		MPMX19_03725	0.70	-0.8
1,170,098	-		MPMX19_03725	0.70	+0.3
1,170,124	+		MPMX19_03725	0.71	-1.2
1,170,167	+		MPMX19_03725	0.73	-0.6
1,170,248	+		MPMX19_03725	0.76	-1.5
1,170,248	+		MPMX19_03725	0.76	-0.7
1,170,248	+		MPMX19_03725	0.76	+0.3
1,170,249	-		MPMX19_03725	0.76	-1.0
1,170,249	-		MPMX19_03725	0.76	-1.3
1,170,484	+		MPMX19_03725	0.84	-1.1
1,170,484	+		MPMX19_03725	0.84	+0.5
1,170,484	+		MPMX19_03725	0.84	-1.3
1,170,484	+		MPMX19_03725	0.84	-0.1
1,170,484	+		MPMX19_03725	0.84	-0.8
1,170,485	-		MPMX19_03725	0.84	-1.8
1,170,485	-		MPMX19_03725	0.84	+0.1
1,170,485	-		MPMX19_03725	0.84	-0.7
1,170,485	-		MPMX19_03725	0.84	-0.1
1,170,485	-		MPMX19_03725	0.84	-0.7
1,170,532	+		MPMX19_03725	0.86	-0.4
1,170,532	+		MPMX19_03725	0.86	+0.2
1,170,532	+		MPMX19_03725	0.86	-0.4
1,170,532	+		MPMX19_03725	0.86	-0.5
1,170,532	+		MPMX19_03725	0.86	-0.7
1,170,533	-		MPMX19_03725	0.86	-0.1
1,170,533	-		MPMX19_03725	0.86	-2.0
1,170,533	-		MPMX19_03725	0.86	-2.3
1,170,533	-		MPMX19_03725	0.86	-1.6
1,170,533	-		MPMX19_03725	0.86	-1.1
1,170,533	-		MPMX19_03725	0.86	+0.1
1,170,533	-		MPMX19_03725	0.86	+0.8
1,170,568	+		MPMX19_03725	0.87	+0.6
1,170,569	-		MPMX19_03725	0.87	-0.8
1,170,569	-		MPMX19_03725	0.87	-0.8
1,170,569	-		MPMX19_03725	0.87	-0.7
1,170,569	-		MPMX19_03725	0.87	-0.1
1,170,569	-		MPMX19_03725	0.87	+0.0
1,170,569	-		MPMX19_03725	0.87	-0.8
1,170,652	+				-3.2
1,170,652	+				-0.1
1,170,652	+				-1.0
1,170,653	-				-0.5
1,170,746	-				+0.5
1,170,993	+				-0.1
1,170,993	+				+0.4
1,170,993	+				-0.6
1,170,993	+				-1.5
1,170,994	-				-1.2
1,170,994	-				+0.7
1,170,994	-				-1.8
1,171,086	+				-0.5
1,171,086	+				-0.6
1,171,086	+				-0.8
1,171,086	+				-0.8
1,171,086	+				+0.2
1,171,086	+				-0.1
1,171,086	+				-0.8
1,171,087	-				-0.8
1,171,087	-				-2.4
1,171,087	-				-1.3
1,171,087	-				-1.1
1,171,087	-				-1.8
1,171,087	-				-0.8
1,171,087	-				+1.0
1,171,087	-				-0.9
1,171,087	-				+0.3
1,171,164	-				+0.4
1,171,164	-				+0.2
1,171,182	+				-2.0
1,171,182	+				-1.3
1,171,183	-				-0.6
1,171,405	+		MPMX19_03726	0.11	-1.1
1,171,405	+		MPMX19_03726	0.11	-0.8
1,171,406	-		MPMX19_03726	0.11	-0.1
1,171,406	-		MPMX19_03726	0.11	-0.3
1,171,406	-		MPMX19_03726	0.11	-0.5
1,171,406	-		MPMX19_03726	0.11	-0.1
1,171,453	+		MPMX19_03726	0.13	-0.3
1,171,454	-		MPMX19_03726	0.14	+0.7
1,171,454	-		MPMX19_03726	0.14	+1.5
1,171,741	+		MPMX19_03726	0.28	-1.0
1,171,741	+		MPMX19_03726	0.28	-0.1
1,171,741	+		MPMX19_03726	0.28	-0.7
1,171,741	+		MPMX19_03726	0.28	+0.5
1,171,742	-		MPMX19_03726	0.29	-2.8
1,171,742	-		MPMX19_03726	0.29	-1.1
1,171,742	-		MPMX19_03726	0.29	-2.2
1,171,742	-		MPMX19_03726	0.29	-0.4