Experiment: NL-CCM_agar
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02569 and MPMX19_02570 overlap by 4 nucleotides MPMX19_02570 and MPMX19_02571 are separated by 62 nucleotides MPMX19_02571 and MPMX19_02572 overlap by 4 nucleotides MPMX19_02572 and MPMX19_02573 are separated by 28 nucleotides
MPMX19_02569: MPMX19_02569 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, at 2,684,374 to 2,686,197
_02569
MPMX19_02570: MPMX19_02570 - Ribosomal RNA small subunit methyltransferase G, at 2,686,194 to 2,686,808
_02570
MPMX19_02571: MPMX19_02571 - Chromosome partitioning protein ParA, at 2,686,871 to 2,687,668
_02571
MPMX19_02572: MPMX19_02572 - Chromosome-partitioning protein ParB, at 2,687,665 to 2,688,576
_02572
MPMX19_02573: MPMX19_02573 - Dihydrofolate reductase, at 2,688,605 to 2,689,099
_02573
Position (kb)
2686
2687
2688 Strain fitness (log2 ratio)
-2
-1
0
1 at 2685.925 kb on + strand, within MPMX19_02569 at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.269 kb on + strand, within MPMX19_02570 at 2686.722 kb on + strand, within MPMX19_02570 at 2686.722 kb on + strand, within MPMX19_02570 at 2686.722 kb on + strand, within MPMX19_02570 at 2687.072 kb on + strand, within MPMX19_02571 at 2687.073 kb on - strand, within MPMX19_02571 at 2687.073 kb on - strand, within MPMX19_02571 at 2687.252 kb on + strand, within MPMX19_02571 at 2687.252 kb on + strand, within MPMX19_02571 at 2687.348 kb on + strand, within MPMX19_02571 at 2687.516 kb on + strand, within MPMX19_02571 at 2687.615 kb on + strand at 2687.616 kb on - strand at 2687.752 kb on + strand at 2688.574 kb on + strand at 2688.574 kb on + strand at 2688.574 kb on + strand at 2688.574 kb on + strand at 2688.575 kb on - strand at 2688.633 kb on + strand at 2688.633 kb on + strand at 2688.633 kb on + strand at 2688.633 kb on + strand at 2688.633 kb on + strand at 2688.633 kb on + strand at 2688.633 kb on + strand at 2688.633 kb on + strand at 2688.633 kb on + strand at 2688.633 kb on + strand at 2688.633 kb on + strand at 2688.633 kb on + strand at 2688.633 kb on + strand at 2688.633 kb on + strand at 2688.633 kb on + strand at 2688.634 kb on - strand at 2688.634 kb on - strand at 2688.634 kb on - strand at 2688.634 kb on - strand at 2688.634 kb on - strand at 2688.634 kb on - strand at 2688.639 kb on + strand at 2688.639 kb on + strand at 2688.639 kb on + strand at 2688.639 kb on + strand at 2688.639 kb on + strand at 2688.639 kb on + strand at 2688.639 kb on + strand at 2688.639 kb on + strand at 2688.639 kb on + strand at 2688.639 kb on + strand at 2688.639 kb on + strand at 2688.640 kb on - strand at 2688.640 kb on - strand at 2688.640 kb on - strand at 2688.640 kb on - strand at 2688.640 kb on - strand at 2688.640 kb on - strand at 2688.640 kb on - strand at 2688.640 kb on - strand at 2688.640 kb on - strand at 2688.640 kb on - strand at 2688.640 kb on - strand at 2688.640 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM_agar remove 2,685,925 + MPMX19_02569 0.85 -0.8 2,686,154 + +0.3 2,686,154 + -0.8 2,686,154 + +0.6 2,686,154 + +0.2 2,686,154 + +0.2 2,686,154 + -1.1 2,686,154 + -1.0 2,686,154 + -0.8 2,686,154 + -1.3 2,686,154 + +0.0 2,686,154 + -1.3 2,686,154 + +0.3 2,686,154 + +0.9 2,686,154 + -1.8 2,686,154 + -0.8 2,686,154 + +0.6 2,686,154 + -0.8 2,686,154 + -0.4 2,686,154 + +0.7 2,686,154 + -0.6 2,686,154 + -0.1 2,686,154 + -1.0 2,686,269 + MPMX19_02570 0.12 +0.3 2,686,722 + MPMX19_02570 0.86 +0.0 2,686,722 + MPMX19_02570 0.86 +0.2 2,686,722 + MPMX19_02570 0.86 -1.4 2,687,072 + MPMX19_02571 0.25 -0.6 2,687,073 - MPMX19_02571 0.25 +0.3 2,687,073 - MPMX19_02571 0.25 -0.3 2,687,252 + MPMX19_02571 0.48 -0.6 2,687,252 + MPMX19_02571 0.48 -0.3 2,687,348 + MPMX19_02571 0.60 -0.6 2,687,516 + MPMX19_02571 0.81 -0.3 2,687,615 + +0.0 2,687,616 - -0.6 2,687,752 + +0.7 2,688,574 + -0.9 2,688,574 + -0.3 2,688,574 + -2.2 2,688,574 + +1.7 2,688,575 - -1.3 2,688,633 + -0.1 2,688,633 + +0.2 2,688,633 + -1.4 2,688,633 + +0.5 2,688,633 + +1.7 2,688,633 + +0.2 2,688,633 + -0.3 2,688,633 + +1.7 2,688,633 + -1.3 2,688,633 + +0.0 2,688,633 + +0.7 2,688,633 + -0.6 2,688,633 + -1.1 2,688,633 + +0.9 2,688,633 + -1.6 2,688,634 - -0.6 2,688,634 - -1.5 2,688,634 - -1.4 2,688,634 - -1.6 2,688,634 - -1.0 2,688,634 - -1.4 2,688,639 + -0.8 2,688,639 + +0.5 2,688,639 + -0.1 2,688,639 + -0.6 2,688,639 + -0.8 2,688,639 + +0.2 2,688,639 + -0.9 2,688,639 + -0.2 2,688,639 + -0.8 2,688,639 + +0.2 2,688,639 + -0.7 2,688,640 - +0.7 2,688,640 - -0.5 2,688,640 - +0.0 2,688,640 - +0.4 2,688,640 - +0.2 2,688,640 - +0.9 2,688,640 - +1.7 2,688,640 - -0.7 2,688,640 - +0.3 2,688,640 - +0.3 2,688,640 - -0.1 2,688,640 - -1.0
Or see this region's nucleotide sequence