Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02117

Experiment: NL-CCM_agar

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM_agar
2,214,778	+				+0.3
2,214,778	+				+0.2
2,214,779	-				+0.8
2,214,779	-				-2.0
2,215,106	+		MPMX19_02115	0.86	+0.0
2,215,106	+		MPMX19_02115	0.86	-1.5
2,215,106	+		MPMX19_02115	0.86	-0.6
2,215,106	+		MPMX19_02115	0.86	-0.8
2,215,106	+		MPMX19_02115	0.86	-0.4
2,215,106	+		MPMX19_02115	0.86	-1.8
2,215,107	-		MPMX19_02115	0.86	-0.5
2,215,107	-		MPMX19_02115	0.86	-1.2
2,215,107	-		MPMX19_02115	0.86	-0.2
2,215,107	-		MPMX19_02115	0.86	-2.3
2,215,118	+		MPMX19_02115	0.89	-0.4
2,215,118	+		MPMX19_02115	0.89	+0.9
2,215,118	+		MPMX19_02115	0.89	-1.8
2,215,118	+		MPMX19_02115	0.89	-0.4
2,215,118	+		MPMX19_02115	0.89	-1.0
2,215,118	+		MPMX19_02115	0.89	+0.0
2,215,119	-		MPMX19_02115	0.89	-1.2
2,215,119	-		MPMX19_02115	0.89	-1.1
2,215,119	-		MPMX19_02115	0.89	+1.6
2,215,119	-		MPMX19_02115	0.89	-1.2
2,215,423	+		MPMX19_02116	0.57	+0.0
2,215,424	-		MPMX19_02116	0.57	-1.4
2,215,424	-		MPMX19_02116	0.57	+0.2
2,215,424	-		MPMX19_02116	0.57	-2.7
2,215,424	-		MPMX19_02116	0.57	-1.0
2,215,424	-		MPMX19_02116	0.57	-1.0
2,215,424	-		MPMX19_02116	0.57	-0.5
2,215,424	-		MPMX19_02116	0.57	-2.6
2,215,612	+				-2.4
2,215,612	+				-0.4
2,215,612	+				-0.7
2,215,613	-				-0.1
2,215,613	-				-0.7
2,215,637	+				-0.2
2,215,647	+				-0.8
2,215,647	+				-0.6
2,215,647	+				+0.6
2,215,647	+				+0.5
2,215,647	+				-1.0
2,215,647	+				+0.6
2,215,648	-				-0.2
2,215,648	-				-0.7
2,215,667	+				+1.9
2,215,667	+				-0.3
2,215,667	+				+0.6
2,215,667	+				-1.0
2,215,667	+				-1.0
2,215,667	+				-1.0
2,215,668	-				-0.4
2,215,668	-				-1.0
2,215,668	-				-1.7
2,215,668	-				-1.5
2,215,668	-				+0.3
2,215,668	-				+0.0
2,215,668	-				-0.0
2,217,170	-				-0.5
2,217,170	-				-1.7
2,217,316	+		MPMX19_02118	0.28	-1.2
2,217,316	+		MPMX19_02118	0.28	-0.4
2,217,316	+		MPMX19_02118	0.28	-0.2
2,217,316	+		MPMX19_02118	0.28	-0.9
2,217,316	+		MPMX19_02118	0.28	-0.4
2,217,316	+		MPMX19_02118	0.28	-0.9
2,217,316	+		MPMX19_02118	0.28	-1.2
2,217,317	-		MPMX19_02118	0.29	-0.7
2,217,317	-		MPMX19_02118	0.29	-1.2
2,217,317	-		MPMX19_02118	0.29	+0.6
2,217,317	-		MPMX19_02118	0.29	-3.4
2,217,317	-		MPMX19_02118	0.29	-1.2
2,217,317	-		MPMX19_02118	0.29	-0.7
2,217,522	+				-2.0
2,217,522	+				-0.6
2,217,522	+				+0.2
2,217,522	+				-0.4
2,217,522	+				+1.0
2,217,522	+				+0.9
2,217,522	+				-0.3
2,217,522	+				+0.6
2,217,522	+				-0.4
2,217,523	-				-0.0
2,217,523	-				+0.0
2,217,523	-				-0.2
2,217,523	-				+0.0
2,217,541	+				+1.0
2,217,541	+				+0.5
2,217,541	+				-1.1
2,217,541	+				+0.2
2,217,541	+				-0.3
2,217,541	+				-0.6
2,217,541	+				-0.6
2,217,541	+				-0.5
2,217,541	+				-0.7
2,217,541	+				-1.5
2,217,541	+				-0.1
2,217,541	+				-0.3
2,217,541	+				-1.7
2,217,541	+				+0.0
2,217,541	+				-1.5
2,217,541	+				+0.2
2,217,541	+				-1.8
2,217,541	+				-1.9
2,217,542	+				-0.5
2,217,542	-				-1.0
2,217,542	-				+1.0
2,217,542	-				-0.2
2,217,542	-				-0.5
2,217,542	-				+2.2
2,217,542	-				-2.2
2,217,542	-				-0.6
2,217,542	-				-0.3
2,217,542	-				-0.4
2,217,542	-				-0.2
2,217,542	-				-0.2
2,217,542	-				-0.4
2,217,542	-				-2.4
2,217,542	-				+0.0
2,217,542	-				+0.6
2,217,542	-				-0.7
2,217,542	-				-0.3
2,217,542	-				-0.2
2,217,542	-				+0.3
2,217,595	+				+1.0
2,217,595	+				+1.3
2,217,595	+				-0.1
2,217,595	+				+0.7
2,217,595	+				-1.7
2,217,595	+				-0.2
2,217,595	+				-0.5
2,217,595	+				+0.3
2,217,595	+				+0.5
2,217,595	+				-0.1
2,217,595	+				-1.0
2,217,595	+				-0.9
2,217,595	+				-1.2
2,217,595	+				+2.2
2,217,595	+				-1.2
2,217,595	+				+0.0
2,217,595	+				+0.4
2,217,595	+				-0.7
2,217,595	+				+0.9
2,217,596	-				+0.8
2,217,596	-				+0.1
2,217,596	-				-1.2
2,217,596	-				-0.0
2,217,596	-				+0.6
2,217,596	-				-1.7
2,217,596	-				+0.5
2,217,596	-				-0.7
2,217,596	-				+0.6
2,217,596	-				-0.4
2,217,596	-				+1.9
2,217,596	-				-0.5
2,217,596	-				+0.4
2,217,596	-				-0.8
2,217,596	-				-0.6
2,217,596	-				+0.0
2,217,596	-				-1.4
2,217,596	-				-1.9
2,217,596	-				+0.2
2,217,596	-				-0.5
2,217,596	-				+0.6
2,217,596	-				+0.0
2,217,600	+				+0.6
2,217,600	+				-0.3
2,217,600	+				-0.1
2,217,600	+				-1.1
2,217,600	+				-0.7
2,217,600	+				+0.9
2,217,600	+				-0.5
2,217,600	+				+0.5
2,217,601	-				+0.6
2,217,601	-				-1.0
2,217,601	-				-0.3
2,217,601	-				-0.2
2,217,601	-				-0.5
2,217,601	-				-0.5
2,217,601	-				-0.6
2,217,601	-				-0.2
2,217,601	-				+0.0
2,217,601	-				+1.6
2,217,622	+				+0.5
2,217,622	+				+0.0
2,217,623	-				-1.5
2,217,623	-				-1.0
2,217,623	-				-0.1
2,217,759	+				-0.9
2,217,759	+				-2.2
2,217,759	+				-0.1
2,217,759	+				-0.7
2,217,759	+				-0.6
2,217,759	+				-0.8
2,217,759	+				-0.1
2,217,759	+				-0.4
2,217,759	+				+0.0
2,217,759	+				+1.6
2,217,759	+				-1.0
2,217,759	+				+0.2
2,217,759	+				+1.4
2,217,760	-				+0.8
2,217,760	-				+0.0
2,217,760	-				+0.8
2,217,760	-				-1.3
2,217,760	-				+0.0
2,217,760	-				+0.6
2,217,760	-				+0.2
2,217,760	-				-0.3
2,217,760	-				-2.0
2,217,792	+				-0.1
2,217,792	+				-0.3
2,217,792	+				-0.4
2,217,792	+				+0.1
2,217,792	+				-0.3
2,217,792	+				-1.5
2,217,792	+				+0.3
2,217,792	+				+0.3
2,217,792	+				+0.3
2,217,792	+				+0.6
2,217,792	+				-1.2
2,217,792	+				+0.3
2,217,792	+				-1.0
2,217,792	+				+0.0
2,217,792	+				-0.8
2,217,792	+				-0.7
2,217,793	-				-1.4
2,217,793	-				+0.5
2,217,793	-				-0.1
2,217,793	-				+0.7
2,217,793	-				+0.5
2,217,793	-				+0.0
2,217,793	-				-1.0
2,217,793	-				-0.1
2,217,793	-				-1.3
2,217,793	-				-0.4
2,217,793	-				-0.2
2,217,793	-				+0.0
2,217,793	-				-0.8
2,217,793	-				+0.6
2,217,793	-				-1.0
2,217,793	-				+1.6
2,217,894	+		MPMX19_02119	0.15	+0.5
2,217,894	+		MPMX19_02119	0.15	-0.2
2,217,894	+		MPMX19_02119	0.15	-0.7
2,217,894	+		MPMX19_02119	0.15	-0.8
2,217,894	+		MPMX19_02119	0.15	+0.3
2,217,894	+		MPMX19_02119	0.15	+0.8
2,217,894	+		MPMX19_02119	0.15	-1.7
2,217,895	-		MPMX19_02119	0.15	-0.3
2,217,895	-		MPMX19_02119	0.15	+0.0
2,217,895	-		MPMX19_02119	0.15	-0.9
2,217,895	-		MPMX19_02119	0.15	-1.7
2,217,895	-		MPMX19_02119	0.15	-0.4
2,217,942	+		MPMX19_02119	0.18	+0.9
2,217,942	+		MPMX19_02119	0.18	-1.7
2,217,942	+		MPMX19_02119	0.18	-0.4
2,217,942	+		MPMX19_02119	0.18	-1.2
2,217,942	+		MPMX19_02119	0.18	-1.0
2,217,942	+		MPMX19_02119	0.18	+1.6
2,217,942	+		MPMX19_02119	0.18	-1.3
2,217,942	+		MPMX19_02119	0.18	+0.6
2,217,942	+		MPMX19_02119	0.18	+0.6
2,217,942	+		MPMX19_02119	0.18	-1.6
2,217,942	+		MPMX19_02119	0.18	+0.2
2,217,942	+		MPMX19_02119	0.18	-0.1
2,217,942	+		MPMX19_02119	0.18	-1.4
2,217,943	-		MPMX19_02119	0.18	-0.2
2,217,943	-		MPMX19_02119	0.18	-0.3
2,217,943	-		MPMX19_02119	0.18	+0.4
2,217,943	-		MPMX19_02119	0.18	-0.1
2,217,943	-		MPMX19_02119	0.18	+1.4
2,217,943	-		MPMX19_02119	0.18	-0.9
2,217,943	-		MPMX19_02119	0.18	-0.7
2,217,943	-		MPMX19_02119	0.18	-0.2
2,217,943	-		MPMX19_02119	0.18	-1.0
2,217,943	-		MPMX19_02119	0.18	-0.1
2,217,943	-		MPMX19_02119	0.18	-0.1
2,217,943	-		MPMX19_02119	0.18	+0.0
2,217,943	-		MPMX19_02119	0.18	-0.1
2,217,943	-		MPMX19_02119	0.18	-2.1
2,217,984	+		MPMX19_02119	0.21	-1.2
2,217,984	+		MPMX19_02119	0.21	+0.2
2,217,984	+		MPMX19_02119	0.21	-0.7
2,217,984	+		MPMX19_02119	0.21	-1.6
2,217,984	+		MPMX19_02119	0.21	-0.5
2,217,984	+		MPMX19_02119	0.21	-0.5
2,217,984	+		MPMX19_02119	0.21	+1.5
2,217,984	+		MPMX19_02119	0.21	+0.4
2,217,984	+		MPMX19_02119	0.21	-0.7
2,217,984	+		MPMX19_02119	0.21	-0.4
2,217,985	-		MPMX19_02119	0.21	+0.8
2,217,985	-		MPMX19_02119	0.21	+0.5
2,217,985	-		MPMX19_02119	0.21	-0.0
2,217,985	-		MPMX19_02119	0.21	-1.8
2,217,985	-		MPMX19_02119	0.21	-0.5
2,217,985	-		MPMX19_02119	0.21	+0.3
2,217,985	-		MPMX19_02119	0.21	-0.7
2,217,985	-		MPMX19_02119	0.21	-2.3
2,217,985	-		MPMX19_02119	0.21	-0.8
2,217,985	-		MPMX19_02119	0.21	-0.7
2,217,985	-		MPMX19_02119	0.21	-1.8
2,217,985	-		MPMX19_02119	0.21	-0.4
2,217,985	-		MPMX19_02119	0.21	-0.2
2,217,985	-		MPMX19_02119	0.21	+0.3
2,217,985	-		MPMX19_02119	0.21	+1.3
2,217,985	-		MPMX19_02119	0.21	-0.4
2,217,985	-		MPMX19_02119	0.21	-0.8
2,217,985	-		MPMX19_02119	0.21	+0.5
2,217,985	-		MPMX19_02119	0.21	-1.0
2,217,985	-		MPMX19_02119	0.21	-0.2
2,217,985	-		MPMX19_02119	0.21	-1.0
2,217,985	-		MPMX19_02119	0.21	-0.4