Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01748

Experiment: NL-CCM_agar

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM_agar
1,838,603	-				+0.4
1,838,603	-				-1.0
1,838,603	-				-0.4
1,838,701	-				-0.4
1,838,701	-				-1.5
1,838,701	-				+1.1
1,838,703	-				-0.4
1,838,703	-				-0.2
1,838,703	-				-0.4
1,838,703	-				+0.0
1,838,703	-				+0.1
1,838,777	+				+0.6
1,838,777	+				-0.4
1,838,778	-				-0.4
1,838,778	-				-0.2
1,838,788	-				-0.3
1,838,788	-				-0.5
1,838,788	-				-1.9
1,838,788	-				+0.5
1,838,790	+				+1.4
1,838,802	-				+0.8
1,838,825	+				-0.1
1,838,825	+				+0.3
1,838,825	+				-1.8
1,838,825	+				-0.2
1,838,826	-				+0.9
1,838,826	-				-1.0
1,838,826	-				-0.1
1,838,826	-				-0.4
1,838,826	-				+0.8
1,838,826	-				-1.2
1,838,826	-				-0.4
1,838,826	-				+0.6
1,838,826	-				-1.4
1,838,870	-				-0.8
1,839,088	+				-0.2
1,839,089	-				-1.2
1,839,089	-				-0.3
1,839,089	-				-1.0
1,839,089	-				-0.9
1,839,089	-				-0.9
1,839,238	+		MPMX19_01748	0.26	-2.2
1,839,238	+		MPMX19_01748	0.26	-2.0
1,839,238	+		MPMX19_01748	0.26	-2.2
1,839,238	+		MPMX19_01748	0.26	-3.0
1,839,238	+		MPMX19_01748	0.26	+0.8
1,839,238	+		MPMX19_01748	0.26	-1.0
1,839,239	-		MPMX19_01748	0.26	-1.0
1,839,239	-		MPMX19_01748	0.26	-0.3
1,839,401	-				-0.6
1,839,472	+				+0.0
1,839,472	+				-1.0
1,839,472	+				-0.9
1,839,472	+				+1.6
1,839,472	+				+1.4
1,839,472	+				-0.5
1,839,473	-				+0.9
1,839,473	-				-0.9
1,839,473	-				-1.2
1,839,473	-				-0.1
1,839,473	-				-0.3
1,839,560	-				+0.6
1,839,594	+				+0.2
1,839,594	+				-0.9
1,839,595	-				-0.6
1,839,595	-				-1.0
1,839,595	-				+1.6
1,839,743	+		MPMX19_01749	0.46	+1.0
1,839,743	+		MPMX19_01749	0.46	+1.2
1,839,743	+		MPMX19_01749	0.46	+0.1
1,839,743	+		MPMX19_01749	0.46	-1.4
1,839,743	+		MPMX19_01749	0.46	+1.1
1,839,743	+		MPMX19_01749	0.46	-1.4
1,839,743	+		MPMX19_01749	0.46	+1.2
1,839,743	+		MPMX19_01749	0.46	-0.9
1,839,744	-		MPMX19_01749	0.47	+1.3
1,839,744	-		MPMX19_01749	0.47	-0.5
1,839,744	-		MPMX19_01749	0.47	+0.2
1,839,744	-		MPMX19_01749	0.47	-0.3
1,839,744	-		MPMX19_01749	0.47	-0.5
1,839,744	-		MPMX19_01749	0.47	-2.0
1,839,744	-		MPMX19_01749	0.47	-1.5
1,839,744	-		MPMX19_01749	0.47	+0.3
1,839,744	-		MPMX19_01749	0.47	-0.2
1,839,744	-		MPMX19_01749	0.47	+0.5
1,839,744	-		MPMX19_01749	0.47	-0.6
1,839,744	-		MPMX19_01749	0.47	+0.0
1,839,886	-				-0.2
1,839,931	+				+0.8
1,839,931	+				-0.7
1,839,931	+				+0.2
1,839,931	+				-1.2
1,839,931	+				-0.8
1,839,931	+				+0.9
1,839,932	-				-1.4
1,839,932	-				-1.0
1,839,932	-				-1.7
1,839,932	-				-0.0
1,839,932	-				-0.8
1,839,932	-				+0.9
1,839,932	-				+0.0
1,839,932	-				-2.2
1,839,932	-				-0.8
1,840,135	+		MPMX19_01750	0.41	+0.4
1,840,135	+		MPMX19_01750	0.41	-1.1
1,840,135	+		MPMX19_01750	0.41	-0.1
1,840,135	+		MPMX19_01750	0.41	-0.4
1,840,135	+		MPMX19_01750	0.41	+0.6
1,840,135	+		MPMX19_01750	0.41	-1.8
1,840,135	+		MPMX19_01750	0.41	-1.7
1,840,135	+		MPMX19_01750	0.41	+0.4
1,840,136	-		MPMX19_01750	0.41	-2.4
1,840,136	-		MPMX19_01750	0.41	-1.7
1,840,136	-		MPMX19_01750	0.41	-0.3
1,840,136	-		MPMX19_01750	0.41	+0.8
1,840,136	-		MPMX19_01750	0.41	-0.8
1,840,136	-		MPMX19_01750	0.41	-0.1
1,840,136	-		MPMX19_01750	0.41	+1.1
1,840,136	-		MPMX19_01750	0.41	+1.6
1,840,196	+		MPMX19_01750	0.55	-0.1
1,840,196	+		MPMX19_01750	0.55	-1.0
1,840,196	+		MPMX19_01750	0.55	-0.0
1,840,196	+		MPMX19_01750	0.55	-1.3
1,840,196	+		MPMX19_01750	0.55	-0.7
1,840,196	+		MPMX19_01750	0.55	-0.2
1,840,196	+		MPMX19_01750	0.55	-1.0
1,840,196	+		MPMX19_01750	0.55	+0.5
1,840,196	+		MPMX19_01750	0.55	-0.6
1,840,196	+		MPMX19_01750	0.55	-1.0
1,840,196	+		MPMX19_01750	0.55	-1.0
1,840,196	+		MPMX19_01750	0.55	+0.4
1,840,196	+		MPMX19_01750	0.55	-0.1
1,840,196	+		MPMX19_01750	0.55	-0.6
1,840,196	+		MPMX19_01750	0.55	-1.7
1,840,196	+		MPMX19_01750	0.55	+0.3
1,840,197	-		MPMX19_01750	0.55	-1.0
1,840,197	-		MPMX19_01750	0.55	-0.6
1,840,197	-		MPMX19_01750	0.55	+1.1
1,840,197	-		MPMX19_01750	0.55	+0.0
1,840,197	-		MPMX19_01750	0.55	+0.7
1,840,197	-		MPMX19_01750	0.55	-0.9
1,840,197	-		MPMX19_01750	0.55	+0.2
1,840,197	-		MPMX19_01750	0.55	-0.9
1,840,197	-		MPMX19_01750	0.55	+0.8
1,840,197	-		MPMX19_01750	0.55	+1.0
1,840,197	-		MPMX19_01750	0.55	+0.0
1,840,197	-		MPMX19_01750	0.55	+0.5
1,840,197	-		MPMX19_01750	0.55	+0.3
1,840,197	-		MPMX19_01750	0.55	-1.0
1,840,197	-		MPMX19_01750	0.55	-0.4
1,840,235	+		MPMX19_01750	0.63	-1.3
1,840,235	+		MPMX19_01750	0.63	+0.0
1,840,235	+		MPMX19_01750	0.63	-0.4
1,840,235	+		MPMX19_01750	0.63	+0.4
1,840,235	+		MPMX19_01750	0.63	-0.3
1,840,235	+		MPMX19_01750	0.63	-1.8
1,840,235	+		MPMX19_01750	0.63	+0.5
1,840,235	+		MPMX19_01750	0.63	-0.2
1,840,235	+		MPMX19_01750	0.63	-0.4
1,840,235	+		MPMX19_01750	0.63	-1.9
1,840,236	-		MPMX19_01750	0.64	+0.3
1,840,236	-		MPMX19_01750	0.64	-2.5
1,840,236	-		MPMX19_01750	0.64	-0.1
1,840,236	-		MPMX19_01750	0.64	-0.6
1,840,236	-		MPMX19_01750	0.64	+1.4
1,840,236	-		MPMX19_01750	0.64	-0.4
1,840,236	-		MPMX19_01750	0.64	+0.7
1,840,236	-		MPMX19_01750	0.64	+1.6
1,840,236	-		MPMX19_01750	0.64	+1.1
1,840,241	+		MPMX19_01750	0.65	-0.4
1,840,241	+		MPMX19_01750	0.65	-1.6
1,840,241	+		MPMX19_01750	0.65	-1.9
1,840,242	-		MPMX19_01750	0.65	+0.6
1,840,242	-		MPMX19_01750	0.65	-1.2
1,840,242	-		MPMX19_01750	0.65	-0.7
1,840,242	-		MPMX19_01750	0.65	-1.1
1,840,242	-		MPMX19_01750	0.65	-0.7
1,840,242	-		MPMX19_01750	0.65	-0.3
1,840,300	+		MPMX19_01750	0.78	+1.6
1,840,300	+		MPMX19_01750	0.78	-2.5
1,840,300	+		MPMX19_01750	0.78	-0.6
1,840,301	-		MPMX19_01750	0.78	+0.3
1,840,301	-		MPMX19_01750	0.78	+0.0
1,840,376	+				+0.2
1,840,376	+				+0.4
1,840,376	+				-0.4
1,840,377	-				+0.3
1,840,377	-				-2.7
1,840,397	+				-0.5
1,840,397	+				-0.5
1,840,397	+				-1.5
1,840,397	+				-0.7
1,840,398	-				+0.1
1,840,398	-				+0.4