Experiment: NL-CCM_agar
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00739 and MPMX19_00740 are separated by 190 nucleotides MPMX19_00740 and MPMX19_00741 are separated by 82 nucleotides MPMX19_00741 and MPMX19_00742 are separated by 3 nucleotides
MPMX19_00739: MPMX19_00739 - hypothetical protein, at 759,914 to 760,501
_00739
MPMX19_00740: MPMX19_00740 - 50S ribosomal protein L32, at 760,692 to 760,880
_00740
MPMX19_00741: MPMX19_00741 - Phosphate acyltransferase, at 760,963 to 762,015
_00741
MPMX19_00742: MPMX19_00742 - 3-oxoacyl-[acyl-carrier-protein] synthase 3, at 762,019 to 762,990
_00742
Position (kb) 760
761
762
763 Strain fitness (log2 ratio) -2
-1
0
1
2 at 760.398 kb on - strand, within MPMX19_00739 at 760.532 kb on + strand at 760.532 kb on + strand at 760.532 kb on + strand at 760.532 kb on + strand at 760.532 kb on + strand at 760.532 kb on + strand at 760.533 kb on - strand at 760.533 kb on - strand at 760.533 kb on - strand at 760.533 kb on - strand at 760.533 kb on - strand at 760.533 kb on - strand at 760.533 kb on - strand at 760.533 kb on - strand at 760.533 kb on - strand at 760.533 kb on - strand at 760.533 kb on - strand at 760.533 kb on - strand at 760.533 kb on - strand at 760.533 kb on - strand at 760.534 kb on + strand at 760.534 kb on + strand at 760.535 kb on - strand at 760.535 kb on - strand at 760.535 kb on - strand at 761.716 kb on + strand, within MPMX19_00741 at 761.967 kb on + strand at 761.969 kb on + strand at 763.004 kb on + strand at 763.005 kb on - strand at 763.005 kb on - strand at 763.005 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM_agar remove 760,398 - MPMX19_00739 0.82 -1.1 760,532 + +0.5 760,532 + -0.0 760,532 + +1.8 760,532 + -1.1 760,532 + -0.2 760,532 + -0.8 760,533 - -1.0 760,533 - -0.6 760,533 - -0.3 760,533 - +0.1 760,533 - -0.6 760,533 - -0.8 760,533 - -0.4 760,533 - +0.4 760,533 - +0.2 760,533 - +0.4 760,533 - +0.5 760,533 - +0.3 760,533 - -1.6 760,533 - -1.7 760,534 + -0.9 760,534 + -0.0 760,535 - -0.2 760,535 - +0.4 760,535 - -1.9 761,716 + MPMX19_00741 0.72 -0.3 761,967 + +0.7 761,969 + -1.0 763,004 + -0.0 763,005 - +0.4 763,005 - -0.0 763,005 - +0.1
Or see this region's nucleotide sequence