Strain Fitness in Methylophilus sp. DMC18 around GFF830

Experiment: D-Glucose and casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose and casaminos (C)
69,116	+		GFF829	0.50	-0.8
69,347	+		GFF829	0.71	-1.9
69,364	+		GFF829	0.73	-1.0
69,365	-		GFF829	0.73	-0.4
69,380	+		GFF829	0.74	+0.2
69,380	+		GFF829	0.74	-1.1
69,380	+		GFF829	0.74	+0.4
69,380	+		GFF829	0.74	-0.2
69,380	+		GFF829	0.74	-1.1
69,380	+		GFF829	0.74	-0.4
69,380	+		GFF829	0.74	-0.1
69,381	-		GFF829	0.75	-0.8
69,410	+		GFF829	0.77	-0.8
69,410	+		GFF829	0.77	-0.8
69,445	+		GFF829	0.80	-0.9
69,446	-		GFF829	0.81	-0.1
69,487	+		GFF829	0.84	-0.6
69,532	+		GFF829	0.89	+0.5
69,607	+				-0.7
69,607	+				+0.3
69,607	+				-0.2
69,607	+				-1.6
69,607	+				-1.4
69,607	+				-0.2
69,607	+				+0.4
69,607	+				+0.4
69,607	+				-0.3
69,651	+				-0.9
69,651	+				-0.6
69,651	+				-0.2
69,652	-				-2.0
69,652	-				-2.0
69,667	+				-0.3
69,667	+				-2.0
69,669	+				+1.2
69,670	-				+0.8
69,702	-				-1.1
69,719	+				-1.2
69,720	-				-0.8
69,720	-				-1.1
69,720	-				-1.4
69,728	+				-1.9
69,729	-				-1.8
69,781	-				-0.4
69,788	+				-0.4
69,789	-				+0.0
69,827	+				-0.7
69,828	-				+1.2
69,850	-				-1.1
69,850	-				+0.2
69,850	-				+0.9
69,944	-		GFF830	0.15	-0.8
69,944	-		GFF830	0.15	+0.4
69,960	-		GFF830	0.16	+0.9
69,960	-		GFF830	0.16	+0.2
69,979	-		GFF830	0.17	-0.7
69,979	-		GFF830	0.17	-1.3
70,055	+		GFF830	0.23	+0.5
70,055	+		GFF830	0.23	-0.4
70,056	-		GFF830	0.23	-0.8
70,056	-		GFF830	0.23	-0.7
70,056	-		GFF830	0.23	-0.8
70,112	-		GFF830	0.27	-1.0
70,123	-		GFF830	0.28	-1.4
70,127	-		GFF830	0.28	+0.2
70,240	-		GFF830	0.37	+0.2
70,272	-		GFF830	0.39	-0.8
70,331	+		GFF830	0.44	+0.4
70,331	+		GFF830	0.44	+1.0
70,331	+		GFF830	0.44	-0.1
70,332	-		GFF830	0.44	-0.3
70,485	-		GFF830	0.56	+0.0
70,485	-		GFF830	0.56	+0.5
70,486	+		GFF830	0.56	-1.4
70,487	-		GFF830	0.56	-0.6
70,487	-		GFF830	0.56	-1.7
70,487	-		GFF830	0.56	-1.1
70,487	-		GFF830	0.56	-0.9
70,492	+		GFF830	0.56	-0.0
70,541	+		GFF830	0.60	-1.8
70,541	+		GFF830	0.60	-1.4
70,542	-		GFF830	0.60	-0.7
70,542	-		GFF830	0.60	-1.6
70,544	+		GFF830	0.60	+0.2
70,544	+		GFF830	0.60	-0.8
70,544	+		GFF830	0.60	-0.4
70,544	+		GFF830	0.60	+0.8
70,544	+		GFF830	0.60	-0.5
70,544	+		GFF830	0.60	+0.8
70,545	-		GFF830	0.60	+0.7
70,545	-		GFF830	0.60	-1.0
70,545	-		GFF830	0.60	-0.7
70,545	-		GFF830	0.60	+0.3
70,562	-		GFF830	0.61	+0.2
70,592	-		GFF830	0.64	-0.4
70,613	+		GFF830	0.65	-0.8
70,613	+		GFF830	0.65	-1.6
70,615	+		GFF830	0.65	+0.2
70,616	-		GFF830	0.65	-1.0
70,616	-		GFF830	0.65	-0.1
70,638	-		GFF830	0.67	+1.0
70,653	+		GFF830	0.68	-2.2
70,653	+		GFF830	0.68	+0.4
70,654	-		GFF830	0.68	-0.2
70,654	-		GFF830	0.68	-0.6
70,654	-		GFF830	0.68	+0.4
70,801	+		GFF830	0.79	+0.5
70,801	+		GFF830	0.79	-1.4
70,802	-		GFF830	0.80	-0.0
70,802	-		GFF830	0.80	-0.0
70,802	-		GFF830	0.80	+0.5
70,802	-		GFF830	0.80	-0.1
70,802	-		GFF830	0.80	-0.2
70,873	+		GFF830	0.85	-0.5
70,894	+		GFF830	0.86	-0.8
70,895	-		GFF830	0.87	-0.1
70,895	-		GFF830	0.87	-0.6
70,926	-		GFF830	0.89	-0.1
70,927	+		GFF830	0.89	-2.4
70,927	+		GFF830	0.89	+0.2
70,928	-		GFF830	0.89	-1.1
70,928	-		GFF830	0.89	-1.4
70,928	-		GFF830	0.89	-0.3
70,928	-		GFF830	0.89	+0.2
70,935	-		GFF830	0.90	-0.8
71,033	+				-1.1
71,033	+				-1.2
71,055	+				-0.1
71,055	+				-1.0
71,055	+				-0.4
71,056	-				+0.8
71,056	-				-0.9
71,056	-				-2.1
71,103	-				-0.6
71,111	+				-0.0
71,112	-				-1.6
71,117	-				-0.6
71,117	-				-0.2
71,117	-				+1.2
71,142	+				-0.9
71,143	-				-2.1
71,143	-				-0.3
71,182	-				-0.2
71,253	+		GFF831	0.19	-0.9
71,254	-		GFF831	0.19	+1.2
71,317	-		GFF831	0.30	-0.1
71,350	+		GFF831	0.36	-0.1
71,350	+		GFF831	0.36	-0.2
71,350	+		GFF831	0.36	-0.0
71,350	+		GFF831	0.36	-1.1
71,350	+		GFF831	0.36	+1.2
71,351	-		GFF831	0.37	+0.6
71,351	-		GFF831	0.37	-0.4
71,351	-		GFF831	0.37	-1.2
71,352	+		GFF831	0.37	-0.8
71,352	+		GFF831	0.37	-1.1
71,353	-		GFF831	0.37	-0.9
71,353	-		GFF831	0.37	-0.8
71,501	+		GFF831	0.63	+0.0
71,502	-		GFF831	0.63	-0.9
71,502	-		GFF831	0.63	-0.4
71,502	-		GFF831	0.63	-0.8
71,505	+		GFF831	0.64	-0.3
71,516	-		GFF831	0.66	-0.9
71,566	-		GFF831	0.75	-2.0
71,593	-		GFF831	0.80	-0.6
71,609	+		GFF831	0.83	-0.2
71,613	+		GFF831	0.83	-0.7
71,614	-		GFF831	0.83	-0.2
71,643	-		GFF831	0.89	-0.1
71,648	+		GFF831	0.89	-0.8
71,776	+				-0.4
71,776	+				-1.1
71,776	+				-0.7
71,776	+				-0.2
71,776	+				+0.6
71,776	+				-0.9
71,776	+				-0.6
71,776	+				-1.2
71,776	+				-1.5
71,776	+				+0.5
71,776	+				-0.1
71,776	+				-0.6
71,776	+				-0.8
71,776	+				-0.9
71,776	+				-0.6
71,776	+				-1.2
71,777	-				+0.2
71,777	-				-0.8
71,777	-				-0.0
71,777	-				-0.8
71,777	-				+0.6
71,777	-				+0.2
71,777	-				-0.2
71,777	-				-1.6
71,777	-				-1.1
71,777	-				+0.2
71,777	-				-0.8
71,777	-				+1.5
71,793	+				+0.2
71,793	+				-0.8
71,793	+				-0.6
71,793	+				+0.1
71,793	+				-0.6
71,793	+				-0.7
71,793	+				-0.6
71,793	+				-1.8
71,793	+				-0.8
71,793	+				-0.4
71,793	+				-1.2
71,794	-				+0.4
71,794	-				-0.5
71,794	-				+0.2
71,794	-				-1.5
71,794	-				-0.1
71,794	-				-1.0
71,794	-				-0.5
71,794	-				+0.2
71,794	-				-0.5
71,797	+				-0.5
71,938	+		GFF832	0.63	-0.8
72,029	+				-0.5
72,030	-				-1.4