Experiment: D-Glucose and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2030 and GFF2031 are separated by 223 nucleotides GFF2031 and GFF2032 are separated by 321 nucleotides
GFF2030 - Undecaprenyl-diphosphatase, at 70,728 to 71,516
GFF2030
GFF2031 - Catalase-peroxidase, at 71,740 to 73,920
GFF2031
GFF2032 - Hydrogen peroxide-inducible genes activator, at 74,242 to 75,147
GFF2032
Position (kb) 71
72
73
74 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 71.574 kb on + strand at 71.614 kb on + strand at 71.614 kb on + strand at 71.660 kb on + strand at 71.660 kb on + strand at 71.660 kb on + strand at 71.660 kb on + strand at 71.660 kb on + strand at 71.660 kb on + strand at 71.660 kb on + strand at 71.660 kb on + strand at 71.661 kb on - strand at 71.661 kb on - strand at 71.661 kb on - strand at 71.661 kb on - strand at 71.661 kb on - strand at 71.661 kb on - strand at 71.664 kb on + strand at 71.664 kb on + strand at 71.664 kb on + strand at 71.664 kb on + strand at 71.664 kb on + strand at 71.665 kb on - strand at 71.665 kb on - strand at 71.666 kb on - strand at 71.667 kb on + strand at 71.667 kb on + strand at 71.667 kb on + strand at 71.667 kb on + strand at 71.668 kb on - strand at 71.668 kb on - strand at 71.678 kb on + strand at 71.741 kb on + strand at 71.742 kb on - strand at 71.742 kb on - strand at 71.742 kb on - strand at 71.745 kb on + strand at 71.831 kb on + strand at 71.831 kb on + strand at 71.831 kb on + strand at 71.832 kb on - strand at 71.832 kb on - strand at 71.832 kb on - strand at 71.832 kb on - strand at 71.843 kb on + strand at 71.844 kb on - strand at 71.901 kb on + strand at 71.901 kb on + strand at 71.901 kb on + strand at 71.902 kb on - strand at 71.933 kb on + strand at 71.933 kb on + strand at 71.933 kb on + strand at 71.933 kb on + strand at 71.964 kb on - strand, within GFF2031 at 71.964 kb on - strand, within GFF2031 at 71.964 kb on - strand, within GFF2031 at 72.021 kb on + strand, within GFF2031 at 72.021 kb on + strand, within GFF2031 at 72.025 kb on + strand, within GFF2031 at 72.025 kb on + strand, within GFF2031 at 72.025 kb on + strand, within GFF2031 at 72.026 kb on - strand, within GFF2031 at 72.026 kb on - strand, within GFF2031 at 72.026 kb on - strand, within GFF2031 at 72.026 kb on - strand, within GFF2031 at 72.151 kb on + strand, within GFF2031 at 72.151 kb on + strand, within GFF2031 at 72.152 kb on - strand, within GFF2031 at 72.155 kb on + strand, within GFF2031 at 72.155 kb on + strand, within GFF2031 at 72.155 kb on + strand, within GFF2031 at 72.156 kb on - strand, within GFF2031 at 72.156 kb on - strand, within GFF2031 at 72.370 kb on + strand, within GFF2031 at 72.371 kb on - strand, within GFF2031 at 72.371 kb on - strand, within GFF2031 at 72.371 kb on - strand, within GFF2031 at 72.371 kb on - strand, within GFF2031 at 72.451 kb on - strand, within GFF2031 at 72.451 kb on - strand, within GFF2031 at 72.495 kb on + strand, within GFF2031 at 72.496 kb on - strand, within GFF2031 at 72.496 kb on - strand, within GFF2031 at 72.496 kb on - strand, within GFF2031 at 72.496 kb on - strand, within GFF2031 at 72.539 kb on - strand, within GFF2031 at 72.656 kb on + strand, within GFF2031 at 72.657 kb on - strand, within GFF2031 at 72.725 kb on + strand, within GFF2031 at 72.725 kb on + strand, within GFF2031 at 72.726 kb on - strand, within GFF2031 at 72.726 kb on - strand, within GFF2031 at 72.813 kb on + strand, within GFF2031 at 72.814 kb on - strand, within GFF2031 at 72.814 kb on - strand, within GFF2031 at 72.814 kb on - strand, within GFF2031 at 72.815 kb on + strand, within GFF2031 at 72.825 kb on + strand, within GFF2031 at 72.825 kb on + strand, within GFF2031 at 72.825 kb on + strand, within GFF2031 at 72.826 kb on - strand, within GFF2031 at 72.826 kb on - strand, within GFF2031 at 72.826 kb on - strand, within GFF2031 at 72.826 kb on - strand, within GFF2031 at 72.906 kb on + strand, within GFF2031 at 72.906 kb on + strand, within GFF2031 at 72.925 kb on - strand, within GFF2031 at 72.941 kb on + strand, within GFF2031 at 73.058 kb on - strand, within GFF2031 at 73.058 kb on - strand, within GFF2031 at 73.058 kb on - strand, within GFF2031 at 73.058 kb on - strand, within GFF2031 at 73.058 kb on - strand, within GFF2031 at 73.185 kb on + strand, within GFF2031 at 73.186 kb on - strand, within GFF2031 at 73.250 kb on + strand, within GFF2031 at 73.250 kb on + strand, within GFF2031 at 73.251 kb on - strand, within GFF2031 at 73.251 kb on - strand, within GFF2031 at 73.361 kb on + strand, within GFF2031 at 73.361 kb on + strand, within GFF2031 at 73.362 kb on - strand, within GFF2031 at 73.362 kb on - strand, within GFF2031 at 73.362 kb on - strand, within GFF2031 at 73.362 kb on - strand, within GFF2031 at 73.362 kb on - strand, within GFF2031 at 73.362 kb on - strand, within GFF2031 at 73.365 kb on + strand, within GFF2031 at 73.365 kb on + strand, within GFF2031 at 73.365 kb on + strand, within GFF2031 at 73.366 kb on - strand, within GFF2031 at 73.366 kb on - strand, within GFF2031 at 73.366 kb on - strand, within GFF2031 at 73.387 kb on - strand, within GFF2031 at 73.387 kb on - strand, within GFF2031 at 73.387 kb on - strand, within GFF2031 at 73.436 kb on + strand, within GFF2031 at 73.437 kb on - strand, within GFF2031 at 73.437 kb on - strand, within GFF2031 at 73.437 kb on - strand, within GFF2031 at 73.457 kb on - strand, within GFF2031 at 73.457 kb on - strand, within GFF2031 at 73.527 kb on + strand, within GFF2031 at 73.528 kb on - strand, within GFF2031 at 73.528 kb on - strand, within GFF2031 at 73.531 kb on + strand, within GFF2031 at 73.531 kb on + strand, within GFF2031 at 73.531 kb on + strand, within GFF2031 at 73.531 kb on + strand, within GFF2031 at 73.532 kb on - strand, within GFF2031 at 73.584 kb on + strand, within GFF2031 at 73.585 kb on - strand, within GFF2031 at 73.662 kb on - strand, within GFF2031 at 73.662 kb on - strand, within GFF2031 at 73.735 kb on + strand at 73.735 kb on + strand at 73.736 kb on - strand at 73.736 kb on - strand at 73.736 kb on - strand at 73.750 kb on + strand at 73.751 kb on - strand at 73.761 kb on + strand at 73.761 kb on + strand at 73.762 kb on - strand at 73.762 kb on - strand at 73.762 kb on - strand at 73.764 kb on - strand at 73.816 kb on - strand at 73.925 kb on + strand at 73.925 kb on + strand at 73.925 kb on + strand at 73.925 kb on + strand at 73.926 kb on - strand at 73.939 kb on + strand at 73.978 kb on + strand at 73.978 kb on + strand at 73.979 kb on - strand at 73.979 kb on - strand at 73.979 kb on - strand at 73.979 kb on - strand at 73.979 kb on - strand at 73.980 kb on + strand at 73.980 kb on + strand at 73.981 kb on - strand at 73.981 kb on - strand at 73.984 kb on - strand at 73.984 kb on - strand at 73.984 kb on - strand at 73.998 kb on - strand at 74.013 kb on + strand at 74.015 kb on + strand at 74.016 kb on - strand at 74.016 kb on - strand at 74.016 kb on - strand at 74.025 kb on + strand at 74.025 kb on + strand at 74.025 kb on + strand at 74.025 kb on + strand at 74.026 kb on - strand at 74.048 kb on + strand at 74.049 kb on - strand at 74.089 kb on - strand at 74.114 kb on + strand at 74.114 kb on + strand at 74.114 kb on + strand at 74.114 kb on + strand at 74.114 kb on + strand at 74.115 kb on - strand at 74.115 kb on - strand at 74.115 kb on - strand at 74.115 kb on - strand at 74.115 kb on - strand at 74.115 kb on - strand at 74.115 kb on - strand at 74.115 kb on - strand at 74.115 kb on - strand at 74.140 kb on + strand at 74.140 kb on + strand at 74.140 kb on + strand at 74.141 kb on - strand at 74.169 kb on + strand at 74.207 kb on + strand at 74.212 kb on + strand at 74.212 kb on + strand at 74.258 kb on + strand at 74.267 kb on + strand at 74.267 kb on + strand at 74.267 kb on + strand at 74.267 kb on + strand at 74.267 kb on + strand at 74.391 kb on + strand, within GFF2032 at 74.391 kb on + strand, within GFF2032 at 74.433 kb on + strand, within GFF2032 at 74.475 kb on + strand, within GFF2032 at 74.551 kb on + strand, within GFF2032 at 74.551 kb on + strand, within GFF2032 at 74.551 kb on + strand, within GFF2032 at 74.551 kb on + strand, within GFF2032 at 74.551 kb on + strand, within GFF2032 at 74.551 kb on + strand, within GFF2032 at 74.551 kb on + strand, within GFF2032 at 74.552 kb on - strand, within GFF2032 at 74.675 kb on + strand, within GFF2032 at 74.675 kb on + strand, within GFF2032 at 74.675 kb on + strand, within GFF2032 at 74.675 kb on + strand, within GFF2032 at 74.684 kb on + strand, within GFF2032 at 74.722 kb on + strand, within GFF2032 at 74.722 kb on + strand, within GFF2032 at 74.722 kb on + strand, within GFF2032 at 74.722 kb on + strand, within GFF2032 at 74.722 kb on + strand, within GFF2032 at 74.723 kb on - strand, within GFF2032 at 74.736 kb on + strand, within GFF2032 at 74.736 kb on + strand, within GFF2032 at 74.737 kb on - strand, within GFF2032 at 74.816 kb on + strand, within GFF2032
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and casaminos (C) remove 71,574 + +0.9 71,614 + -0.0 71,614 + -0.6 71,660 + -1.4 71,660 + -1.4 71,660 + -0.4 71,660 + -0.6 71,660 + +0.4 71,660 + -0.2 71,660 + -2.0 71,660 + -1.9 71,661 - +0.8 71,661 - -0.4 71,661 - -0.6 71,661 - +0.4 71,661 - -0.1 71,661 - +0.5 71,664 + +0.8 71,664 + -0.2 71,664 + -0.7 71,664 + -1.0 71,664 + -0.6 71,665 - -0.6 71,665 - -0.6 71,666 - -1.0 71,667 + -0.5 71,667 + -0.6 71,667 + -0.7 71,667 + -0.2 71,668 - -1.2 71,668 - -0.9 71,678 + -0.2 71,741 + -0.6 71,742 - -0.6 71,742 - -1.2 71,742 - +0.4 71,745 + -1.1 71,831 + -1.2 71,831 + -2.4 71,831 + +0.0 71,832 - +0.6 71,832 - -1.4 71,832 - -0.4 71,832 - -0.6 71,843 + -0.4 71,844 - -0.6 71,901 + -1.0 71,901 + +0.9 71,901 + +1.7 71,902 - -1.0 71,933 + -0.6 71,933 + -1.7 71,933 + -0.6 71,933 + -1.4 71,964 - GFF2031 0.10 +0.1 71,964 - GFF2031 0.10 +0.5 71,964 - GFF2031 0.10 +1.4 72,021 + GFF2031 0.13 -0.5 72,021 + GFF2031 0.13 -0.1 72,025 + GFF2031 0.13 -0.2 72,025 + GFF2031 0.13 -1.8 72,025 + GFF2031 0.13 -0.6 72,026 - GFF2031 0.13 +1.8 72,026 - GFF2031 0.13 -1.2 72,026 - GFF2031 0.13 -0.6 72,026 - GFF2031 0.13 -1.1 72,151 + GFF2031 0.19 -1.6 72,151 + GFF2031 0.19 -2.1 72,152 - GFF2031 0.19 -1.0 72,155 + GFF2031 0.19 -0.6 72,155 + GFF2031 0.19 -0.4 72,155 + GFF2031 0.19 +0.8 72,156 - GFF2031 0.19 -0.4 72,156 - GFF2031 0.19 +0.0 72,370 + GFF2031 0.29 +0.1 72,371 - GFF2031 0.29 +1.2 72,371 - GFF2031 0.29 -0.4 72,371 - GFF2031 0.29 -0.6 72,371 - GFF2031 0.29 -0.2 72,451 - GFF2031 0.33 -1.4 72,451 - GFF2031 0.33 -1.2 72,495 + GFF2031 0.35 -0.8 72,496 - GFF2031 0.35 +0.6 72,496 - GFF2031 0.35 -0.2 72,496 - GFF2031 0.35 +0.0 72,496 - GFF2031 0.35 +0.9 72,539 - GFF2031 0.37 -1.0 72,656 + GFF2031 0.42 +0.7 72,657 - GFF2031 0.42 -2.1 72,725 + GFF2031 0.45 +0.6 72,725 + GFF2031 0.45 -0.6 72,726 - GFF2031 0.45 -0.6 72,726 - GFF2031 0.45 -0.1 72,813 + GFF2031 0.49 -1.0 72,814 - GFF2031 0.49 -1.9 72,814 - GFF2031 0.49 -1.1 72,814 - GFF2031 0.49 -1.1 72,815 + GFF2031 0.49 -0.6 72,825 + GFF2031 0.50 -0.4 72,825 + GFF2031 0.50 -1.6 72,825 + GFF2031 0.50 -0.6 72,826 - GFF2031 0.50 -0.2 72,826 - GFF2031 0.50 -1.0 72,826 - GFF2031 0.50 -0.6 72,826 - GFF2031 0.50 -2.6 72,906 + GFF2031 0.53 -0.8 72,906 + GFF2031 0.53 -0.4 72,925 - GFF2031 0.54 -0.1 72,941 + GFF2031 0.55 -1.7 73,058 - GFF2031 0.60 +0.4 73,058 - GFF2031 0.60 -1.0 73,058 - GFF2031 0.60 -0.8 73,058 - GFF2031 0.60 +0.9 73,058 - GFF2031 0.60 -0.2 73,185 + GFF2031 0.66 +0.9 73,186 - GFF2031 0.66 +0.0 73,250 + GFF2031 0.69 +0.2 73,250 + GFF2031 0.69 -2.1 73,251 - GFF2031 0.69 -1.6 73,251 - GFF2031 0.69 -1.0 73,361 + GFF2031 0.74 -2.8 73,361 + GFF2031 0.74 -1.0 73,362 - GFF2031 0.74 -0.3 73,362 - GFF2031 0.74 +0.4 73,362 - GFF2031 0.74 +0.9 73,362 - GFF2031 0.74 +0.4 73,362 - GFF2031 0.74 -0.2 73,362 - GFF2031 0.74 +2.1 73,365 + GFF2031 0.75 -2.1 73,365 + GFF2031 0.75 -0.2 73,365 + GFF2031 0.75 -0.4 73,366 - GFF2031 0.75 -1.6 73,366 - GFF2031 0.75 -1.0 73,366 - GFF2031 0.75 -0.6 73,387 - GFF2031 0.76 -2.3 73,387 - GFF2031 0.76 -0.8 73,387 - GFF2031 0.76 -0.1 73,436 + GFF2031 0.78 -0.5 73,437 - GFF2031 0.78 -1.6 73,437 - GFF2031 0.78 -1.1 73,437 - GFF2031 0.78 -1.1 73,457 - GFF2031 0.79 -0.6 73,457 - GFF2031 0.79 -0.7 73,527 + GFF2031 0.82 +0.9 73,528 - GFF2031 0.82 +0.5 73,528 - GFF2031 0.82 -0.6 73,531 + GFF2031 0.82 +0.2 73,531 + GFF2031 0.82 +1.0 73,531 + GFF2031 0.82 -0.6 73,531 + GFF2031 0.82 -1.4 73,532 - GFF2031 0.82 -1.3 73,584 + GFF2031 0.85 -1.3 73,585 - GFF2031 0.85 -1.0 73,662 - GFF2031 0.88 -2.6 73,662 - GFF2031 0.88 -0.8 73,735 + -1.0 73,735 + -0.6 73,736 - +0.6 73,736 - -0.5 73,736 - -0.2 73,750 + -0.6 73,751 - -1.4 73,761 + +0.5 73,761 + +0.0 73,762 - -1.2 73,762 - +0.0 73,762 - +0.0 73,764 - +1.6 73,816 - -0.8 73,925 + -0.2 73,925 + +0.0 73,925 + -0.2 73,925 + -0.1 73,926 - -0.2 73,939 + -0.0 73,978 + +1.2 73,978 + -0.6 73,979 - -0.3 73,979 - -0.4 73,979 - +0.4 73,979 - -0.6 73,979 - -1.0 73,980 + +1.4 73,980 + -0.6 73,981 - -1.1 73,981 - -1.8 73,984 - -0.3 73,984 - -0.4 73,984 - -1.0 73,998 - -0.2 74,013 + -0.8 74,015 + +0.0 74,016 - -0.6 74,016 - +0.8 74,016 - +0.6 74,025 + +0.1 74,025 + -0.6 74,025 + -0.2 74,025 + +0.9 74,026 - +1.4 74,048 + -0.6 74,049 - -0.0 74,089 - -0.4 74,114 + -1.0 74,114 + -0.8 74,114 + +0.6 74,114 + +0.9 74,114 + -0.2 74,115 - -1.0 74,115 - +0.3 74,115 - -1.2 74,115 - -0.4 74,115 - +0.4 74,115 - -0.7 74,115 - +1.4 74,115 - -1.9 74,115 - -0.8 74,140 + -0.4 74,140 + -0.5 74,140 + -0.7 74,141 - -1.2 74,169 + -0.2 74,207 + +0.4 74,212 + -0.0 74,212 + -0.2 74,258 + -0.8 74,267 + -0.8 74,267 + +0.5 74,267 + +0.0 74,267 + +0.6 74,267 + +0.4 74,391 + GFF2032 0.16 +0.8 74,391 + GFF2032 0.16 -0.5 74,433 + GFF2032 0.21 -0.2 74,475 + GFF2032 0.26 -1.0 74,551 + GFF2032 0.34 -1.0 74,551 + GFF2032 0.34 -0.6 74,551 + GFF2032 0.34 -0.4 74,551 + GFF2032 0.34 +0.4 74,551 + GFF2032 0.34 -1.6 74,551 + GFF2032 0.34 +0.5 74,551 + GFF2032 0.34 -0.4 74,552 - GFF2032 0.34 -0.4 74,675 + GFF2032 0.48 -0.1 74,675 + GFF2032 0.48 -1.0 74,675 + GFF2032 0.48 -0.4 74,675 + GFF2032 0.48 -0.3 74,684 + GFF2032 0.49 -1.8 74,722 + GFF2032 0.53 -1.8 74,722 + GFF2032 0.53 -0.8 74,722 + GFF2032 0.53 +0.7 74,722 + GFF2032 0.53 -0.6 74,722 + GFF2032 0.53 -1.0 74,723 - GFF2032 0.53 -0.8 74,736 + GFF2032 0.55 +1.4 74,736 + GFF2032 0.55 -0.8 74,737 - GFF2032 0.55 +0.0 74,816 + GFF2032 0.63 -0.6
Or see this region's nucleotide sequence