Experiment: NL-CCM_agar
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06507 and MPMX19_06508 are separated by 61 nucleotides MPMX19_06508 and MPMX19_06509 are separated by 225 nucleotides
MPMX19_06507: MPMX19_06507 - hypothetical protein, at 290,895 to 291,938
_06507
MPMX19_06508: MPMX19_06508 - Nitrilotriacetate monooxygenase component A, at 292,000 to 293,319
_06508
MPMX19_06509: MPMX19_06509 - Putative aliphatic sulfonates transport permease protein SsuC, at 293,545 to 294,420
_06509
Position (kb) 291
292
293
294 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 291.126 kb on + strand, within MPMX19_06507 at 291.126 kb on + strand, within MPMX19_06507 at 291.126 kb on + strand, within MPMX19_06507 at 291.126 kb on + strand, within MPMX19_06507 at 291.127 kb on - strand, within MPMX19_06507 at 291.127 kb on - strand, within MPMX19_06507 at 291.127 kb on - strand, within MPMX19_06507 at 291.127 kb on - strand, within MPMX19_06507 at 291.384 kb on + strand, within MPMX19_06507 at 291.384 kb on + strand, within MPMX19_06507 at 291.384 kb on + strand, within MPMX19_06507 at 291.384 kb on + strand, within MPMX19_06507 at 291.517 kb on - strand, within MPMX19_06507 at 291.517 kb on - strand, within MPMX19_06507 at 291.517 kb on - strand, within MPMX19_06507 at 291.517 kb on - strand, within MPMX19_06507 at 291.699 kb on + strand, within MPMX19_06507 at 291.699 kb on + strand, within MPMX19_06507 at 291.699 kb on + strand, within MPMX19_06507 at 291.700 kb on - strand, within MPMX19_06507 at 291.700 kb on - strand, within MPMX19_06507 at 291.700 kb on - strand, within MPMX19_06507 at 291.700 kb on - strand, within MPMX19_06507 at 291.700 kb on - strand, within MPMX19_06507 at 291.700 kb on - strand, within MPMX19_06507 at 291.700 kb on - strand, within MPMX19_06507 at 291.700 kb on - strand, within MPMX19_06507 at 291.700 kb on - strand, within MPMX19_06507 at 291.700 kb on - strand, within MPMX19_06507 at 291.700 kb on - strand, within MPMX19_06507 at 291.832 kb on - strand, within MPMX19_06507 at 291.832 kb on - strand, within MPMX19_06507 at 291.832 kb on - strand, within MPMX19_06507 at 291.832 kb on - strand, within MPMX19_06507 at 291.961 kb on + strand at 291.961 kb on + strand at 291.961 kb on + strand at 292.021 kb on - strand at 292.178 kb on - strand, within MPMX19_06508 at 292.178 kb on - strand, within MPMX19_06508 at 292.450 kb on + strand, within MPMX19_06508 at 292.816 kb on - strand, within MPMX19_06508 at 292.927 kb on + strand, within MPMX19_06508 at 292.927 kb on + strand, within MPMX19_06508 at 292.927 kb on + strand, within MPMX19_06508 at 292.927 kb on + strand, within MPMX19_06508 at 292.927 kb on + strand, within MPMX19_06508 at 293.066 kb on - strand, within MPMX19_06508 at 293.179 kb on + strand, within MPMX19_06508 at 293.179 kb on + strand, within MPMX19_06508 at 293.448 kb on - strand at 294.027 kb on - strand, within MPMX19_06509 at 294.027 kb on - strand, within MPMX19_06509 at 294.055 kb on + strand, within MPMX19_06509 at 294.055 kb on + strand, within MPMX19_06509
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM_agar remove 291,126 + MPMX19_06507 0.22 +0.5 291,126 + MPMX19_06507 0.22 +0.1 291,126 + MPMX19_06507 0.22 -0.1 291,126 + MPMX19_06507 0.22 +0.2 291,127 - MPMX19_06507 0.22 -1.9 291,127 - MPMX19_06507 0.22 -0.3 291,127 - MPMX19_06507 0.22 +0.1 291,127 - MPMX19_06507 0.22 -0.5 291,384 + MPMX19_06507 0.47 +0.3 291,384 + MPMX19_06507 0.47 -0.8 291,384 + MPMX19_06507 0.47 +0.3 291,384 + MPMX19_06507 0.47 +0.1 291,517 - MPMX19_06507 0.60 +0.6 291,517 - MPMX19_06507 0.60 +0.3 291,517 - MPMX19_06507 0.60 -0.1 291,517 - MPMX19_06507 0.60 -0.3 291,699 + MPMX19_06507 0.77 -1.4 291,699 + MPMX19_06507 0.77 -2.8 291,699 + MPMX19_06507 0.77 -0.7 291,700 - MPMX19_06507 0.77 -1.1 291,700 - MPMX19_06507 0.77 +0.8 291,700 - MPMX19_06507 0.77 -0.4 291,700 - MPMX19_06507 0.77 +0.4 291,700 - MPMX19_06507 0.77 -0.2 291,700 - MPMX19_06507 0.77 -0.1 291,700 - MPMX19_06507 0.77 +1.3 291,700 - MPMX19_06507 0.77 +0.1 291,700 - MPMX19_06507 0.77 +1.2 291,700 - MPMX19_06507 0.77 -0.3 291,700 - MPMX19_06507 0.77 +0.6 291,832 - MPMX19_06507 0.90 -0.9 291,832 - MPMX19_06507 0.90 +0.1 291,832 - MPMX19_06507 0.90 +1.1 291,832 - MPMX19_06507 0.90 -0.3 291,961 + -2.3 291,961 + +0.4 291,961 + -0.2 292,021 - -2.6 292,178 - MPMX19_06508 0.13 +0.1 292,178 - MPMX19_06508 0.13 -0.4 292,450 + MPMX19_06508 0.34 -0.2 292,816 - MPMX19_06508 0.62 -0.5 292,927 + MPMX19_06508 0.70 -1.4 292,927 + MPMX19_06508 0.70 -0.7 292,927 + MPMX19_06508 0.70 -0.5 292,927 + MPMX19_06508 0.70 -2.2 292,927 + MPMX19_06508 0.70 -2.7 293,066 - MPMX19_06508 0.81 -2.3 293,179 + MPMX19_06508 0.89 -0.1 293,179 + MPMX19_06508 0.89 -3.3 293,448 - -0.5 294,027 - MPMX19_06509 0.55 +0.3 294,027 - MPMX19_06509 0.55 +1.1 294,055 + MPMX19_06509 0.58 -0.2 294,055 + MPMX19_06509 0.58 -0.2
Or see this region's nucleotide sequence